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PubMed:10196193 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
T1 0-100 Sentence denotes CheY-dependent methylation of the asparagine receptor, McpB, during chemotaxis in Bacillus subtilis.
T2 101-229 Sentence denotes For the Gram-positive organism Bacillus subtilis, chemotaxis to the attractant asparagine is mediated by the chemoreceptor McpB.
T3 230-388 Sentence denotes In this study, we show that rapid net demethylation of B. subtilis McpB results in the immediate production of methanol, presumably due to the action of CheB.
T4 389-485 Sentence denotes We also show that net demethylation of McpB occurs upon both addition and removal of asparagine.
T5 486-568 Sentence denotes After each demethylation event, McpB is remethylated to nearly prestimulus levels.
T6 569-662 Sentence denotes Both remethylation events are attributable to CheR using S-adenosylmethionine as a substrate.
T7 663-809 Sentence denotes Therefore, no methyl transfer to an intermediate carrier need be postulated to occur during chemotaxis in B. subtilis as was previously suggested.
T8 810-1050 Sentence denotes Furthermore, we show that the remethylation of asparagine-bound McpB requires the response regulator, CheY-P, suggesting that CheY-P acts in a feedback mechanism to facilitate adaptation to positive stimuli during chemotaxis in B. subtilis.
T9 1051-1350 Sentence denotes This hypothesis is supported by two observations: a cheRBCD mutant is capable of transient excitation and subsequent oscillations that bring the flagellar rotational bias below the prestimulus value in the tethered cell assay, and the cheRBCD mutant is capable of swarming in a Tryptone swarm plate.

bionlp-st-epi-2011-training

Id Subject Object Predicate Lexical cue
T1 0-4 Protein denotes CheY
T2 55-59 Protein denotes McpB
T3 224-228 Protein denotes McpB
T4 297-301 Protein denotes McpB
T5 383-387 Protein denotes CheB
T6 428-432 Protein denotes McpB
T7 518-522 Protein denotes McpB
T8 615-619 Protein denotes CheR
T9 874-878 Protein denotes McpB
T10 912-916 Protein denotes CheY
T11 936-940 Protein denotes CheY
T12 1103-1107 Protein denotes cheR
T13 1107-1108 Protein denotes B
T14 1108-1109 Protein denotes C
T15 1109-1110 Protein denotes D
T16 1286-1290 Protein denotes cheR
T17 1290-1291 Protein denotes B
T18 1291-1292 Protein denotes C
T19 1292-1293 Protein denotes D

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 82-99 OrganismTaxon denotes Bacillus subtilis 1423
T2 132-149 OrganismTaxon denotes Bacillus subtilis 1423

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 123-131 Body_part denotes organism http://purl.obolibrary.org/obo/UBERON_0000468
T2 210-223 Body_part denotes chemoreceptor http://purl.obolibrary.org/obo/UBERON_0018391
T3 1344-1349 Body_part denotes plate http://purl.obolibrary.org/obo/UBERON_6004475

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 1257-1270 Cell denotes tethered cell http://purl.obolibrary.org/obo/CL:0002450