PubMed:10092109
Annnotations
Inflammaging
{"project":"Inflammaging","denotations":[{"id":"T1","span":{"begin":0,"end":71},"obj":"Sentence"},{"id":"T2","span":{"begin":72,"end":168},"obj":"Sentence"},{"id":"T3","span":{"begin":169,"end":304},"obj":"Sentence"},{"id":"T4","span":{"begin":305,"end":441},"obj":"Sentence"},{"id":"T5","span":{"begin":442,"end":544},"obj":"Sentence"},{"id":"T6","span":{"begin":545,"end":659},"obj":"Sentence"},{"id":"T7","span":{"begin":660,"end":864},"obj":"Sentence"},{"id":"T8","span":{"begin":865,"end":982},"obj":"Sentence"},{"id":"T9","span":{"begin":983,"end":1196},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":71},"obj":"Sentence"},{"id":"T2","span":{"begin":72,"end":168},"obj":"Sentence"},{"id":"T3","span":{"begin":169,"end":304},"obj":"Sentence"},{"id":"T4","span":{"begin":305,"end":441},"obj":"Sentence"},{"id":"T5","span":{"begin":442,"end":544},"obj":"Sentence"},{"id":"T6","span":{"begin":545,"end":659},"obj":"Sentence"},{"id":"T7","span":{"begin":660,"end":864},"obj":"Sentence"},{"id":"T8","span":{"begin":865,"end":982},"obj":"Sentence"},{"id":"T9","span":{"begin":983,"end":1196},"obj":"Sentence"}],"text":"Interferon-beta mediates stromal cell rescue of T cells from apoptosis.\nThe resolution of immune responses is characterized by extensive apoptosis of activated T cells. However, to generate and maintain immunological memory, some antigen-specific T cells must survive and revert to a resting G0/G1 state. Cytokines that bind to the common gamma chain of the IL-2 receptor promote the survival of T cell blasts, but also induce proliferation. In contrast, soluble factors secreted by stromal cells induce Tcell survival in a resting G0/G1 state. We now report that interferon-beta is the principal mediator of stromal cell-mediated Tcell rescue from apoptosis. Interferon-alpha and -beta promote the reversion of blast Tcells to a resting G0/G1 configuration with all the characteristic features of stromal cell rescue; such as high Bcl-XL expression and low Bcl-2. Type I interferons and stromal cells stimulate apparently identical signaling pathways, leading to STAT-1 activation. We also show that this mechanism may play a fundamental role in the persistence of T cells at sites of chronic inflammation; suggesting that chronic inflammation is an aberrant consequence of immunological memory."}
jnlpba-st-training
{"project":"jnlpba-st-training","denotations":[{"id":"T1","span":{"begin":0,"end":15},"obj":"protein"},{"id":"T2","span":{"begin":48,"end":55},"obj":"cell_type"},{"id":"T3","span":{"begin":160,"end":167},"obj":"cell_type"},{"id":"T4","span":{"begin":230,"end":254},"obj":"cell_type"},{"id":"T5","span":{"begin":305,"end":314},"obj":"protein"},{"id":"T6","span":{"begin":339,"end":350},"obj":"protein"},{"id":"T7","span":{"begin":358,"end":362},"obj":"protein"},{"id":"T8","span":{"begin":396,"end":409},"obj":"cell_type"},{"id":"T9","span":{"begin":455,"end":470},"obj":"protein"},{"id":"T10","span":{"begin":483,"end":496},"obj":"cell_type"},{"id":"T11","span":{"begin":660,"end":686},"obj":"protein"},{"id":"T12","span":{"begin":712,"end":724},"obj":"cell_type"},{"id":"T13","span":{"begin":832,"end":838},"obj":"protein"},{"id":"T14","span":{"begin":858,"end":863},"obj":"protein"},{"id":"T15","span":{"begin":865,"end":883},"obj":"protein"},{"id":"T16","span":{"begin":888,"end":901},"obj":"cell_type"},{"id":"T17","span":{"begin":964,"end":970},"obj":"protein"},{"id":"T18","span":{"begin":1066,"end":1073},"obj":"cell_type"}],"text":"Interferon-beta mediates stromal cell rescue of T cells from apoptosis.\nThe resolution of immune responses is characterized by extensive apoptosis of activated T cells. However, to generate and maintain immunological memory, some antigen-specific T cells must survive and revert to a resting G0/G1 state. Cytokines that bind to the common gamma chain of the IL-2 receptor promote the survival of T cell blasts, but also induce proliferation. In contrast, soluble factors secreted by stromal cells induce Tcell survival in a resting G0/G1 state. We now report that interferon-beta is the principal mediator of stromal cell-mediated Tcell rescue from apoptosis. Interferon-alpha and -beta promote the reversion of blast Tcells to a resting G0/G1 configuration with all the characteristic features of stromal cell rescue; such as high Bcl-XL expression and low Bcl-2. Type I interferons and stromal cells stimulate apparently identical signaling pathways, leading to STAT-1 activation. We also show that this mechanism may play a fundamental role in the persistence of T cells at sites of chronic inflammation; suggesting that chronic inflammation is an aberrant consequence of immunological memory."}
pubmed-sentences-benchmark
{"project":"pubmed-sentences-benchmark","denotations":[{"id":"S1","span":{"begin":0,"end":71},"obj":"Sentence"},{"id":"S2","span":{"begin":72,"end":168},"obj":"Sentence"},{"id":"S3","span":{"begin":169,"end":304},"obj":"Sentence"},{"id":"S4","span":{"begin":305,"end":441},"obj":"Sentence"},{"id":"S5","span":{"begin":442,"end":544},"obj":"Sentence"},{"id":"S6","span":{"begin":545,"end":659},"obj":"Sentence"},{"id":"S7","span":{"begin":660,"end":864},"obj":"Sentence"},{"id":"S8","span":{"begin":865,"end":982},"obj":"Sentence"},{"id":"S9","span":{"begin":983,"end":1196},"obj":"Sentence"}],"text":"Interferon-beta mediates stromal cell rescue of T cells from apoptosis.\nThe resolution of immune responses is characterized by extensive apoptosis of activated T cells. However, to generate and maintain immunological memory, some antigen-specific T cells must survive and revert to a resting G0/G1 state. Cytokines that bind to the common gamma chain of the IL-2 receptor promote the survival of T cell blasts, but also induce proliferation. In contrast, soluble factors secreted by stromal cells induce Tcell survival in a resting G0/G1 state. We now report that interferon-beta is the principal mediator of stromal cell-mediated Tcell rescue from apoptosis. Interferon-alpha and -beta promote the reversion of blast Tcells to a resting G0/G1 configuration with all the characteristic features of stromal cell rescue; such as high Bcl-XL expression and low Bcl-2. Type I interferons and stromal cells stimulate apparently identical signaling pathways, leading to STAT-1 activation. We also show that this mechanism may play a fundamental role in the persistence of T cells at sites of chronic inflammation; suggesting that chronic inflammation is an aberrant consequence of immunological memory."}
genia-medco-coref
{"project":"genia-medco-coref","denotations":[{"id":"C1","span":{"begin":0,"end":15},"obj":"NP"},{"id":"C2","span":{"begin":61,"end":70},"obj":"NP"},{"id":"C3","span":{"begin":203,"end":223},"obj":"NP"},{"id":"C4","span":{"begin":282,"end":303},"obj":"NP"},{"id":"C5","span":{"begin":305,"end":314},"obj":"NP"},{"id":"C6","span":{"begin":315,"end":319},"obj":"NP"},{"id":"C7","span":{"begin":483,"end":496},"obj":"NP"},{"id":"C8","span":{"begin":522,"end":543},"obj":"NP"},{"id":"C9","span":{"begin":564,"end":579},"obj":"NP"},{"id":"C10","span":{"begin":649,"end":658},"obj":"NP"},{"id":"C11","span":{"begin":888,"end":901},"obj":"NP"},{"id":"C12","span":{"begin":1086,"end":1107},"obj":"NP"},{"id":"C13","span":{"begin":1124,"end":1144},"obj":"NP"},{"id":"C14","span":{"begin":1175,"end":1195},"obj":"NP"}],"relations":[{"id":"R1","pred":"coref-relat","subj":"C6","obj":"C5"},{"id":"R2","pred":"coref-ident","subj":"C8","obj":"C4"},{"id":"R3","pred":"coref-ident","subj":"C9","obj":"C1"},{"id":"R4","pred":"coref-ident","subj":"C10","obj":"C2"},{"id":"R5","pred":"coref-ident","subj":"C11","obj":"C7"},{"id":"R6","pred":"coref-ident","subj":"C13","obj":"C12"},{"id":"R7","pred":"coref-ident","subj":"C14","obj":"C3"}],"text":"Interferon-beta mediates stromal cell rescue of T cells from apoptosis.\nThe resolution of immune responses is characterized by extensive apoptosis of activated T cells. However, to generate and maintain immunological memory, some antigen-specific T cells must survive and revert to a resting G0/G1 state. Cytokines that bind to the common gamma chain of the IL-2 receptor promote the survival of T cell blasts, but also induce proliferation. In contrast, soluble factors secreted by stromal cells induce Tcell survival in a resting G0/G1 state. We now report that interferon-beta is the principal mediator of stromal cell-mediated Tcell rescue from apoptosis. Interferon-alpha and -beta promote the reversion of blast Tcells to a resting G0/G1 configuration with all the characteristic features of stromal cell rescue; such as high Bcl-XL expression and low Bcl-2. Type I interferons and stromal cells stimulate apparently identical signaling pathways, leading to STAT-1 activation. We also show that this mechanism may play a fundamental role in the persistence of T cells at sites of chronic inflammation; suggesting that chronic inflammation is an aberrant consequence of immunological memory."}
GENIAcorpus
{"project":"GENIAcorpus","denotations":[{"id":"T1","span":{"begin":0,"end":15},"obj":"protein_molecule"},{"id":"T2","span":{"begin":25,"end":44},"obj":"other_name"},{"id":"T3","span":{"begin":48,"end":55},"obj":"cell_type"},{"id":"T4","span":{"begin":61,"end":70},"obj":"other_name"},{"id":"T5","span":{"begin":90,"end":106},"obj":"other_name"},{"id":"T6","span":{"begin":137,"end":146},"obj":"other_name"},{"id":"T7","span":{"begin":160,"end":167},"obj":"cell_type"},{"id":"T8","span":{"begin":203,"end":223},"obj":"other_name"},{"id":"T9","span":{"begin":230,"end":254},"obj":"cell_type"},{"id":"T10","span":{"begin":284,"end":303},"obj":"other_name"},{"id":"T11","span":{"begin":305,"end":314},"obj":"protein_family_or_group"},{"id":"T12","span":{"begin":339,"end":350},"obj":"protein_subunit"},{"id":"T13","span":{"begin":358,"end":362},"obj":"protein_molecule"},{"id":"T14","span":{"begin":396,"end":409},"obj":"cell_type"},{"id":"T15","span":{"begin":455,"end":470},"obj":"protein_family_or_group"},{"id":"T16","span":{"begin":483,"end":496},"obj":"cell_type"},{"id":"T17","span":{"begin":504,"end":518},"obj":"other_name"},{"id":"T18","span":{"begin":524,"end":543},"obj":"other_name"},{"id":"T19","span":{"begin":609,"end":643},"obj":"other_name"},{"id":"T20","span":{"begin":649,"end":658},"obj":"other_name"},{"id":"T21","span":{"begin":712,"end":724},"obj":"cell_type"},{"id":"T22","span":{"begin":730,"end":757},"obj":"other_name"},{"id":"T23","span":{"begin":798,"end":817},"obj":"other_name"},{"id":"T24","span":{"begin":832,"end":838},"obj":"protein_molecule"},{"id":"T25","span":{"begin":858,"end":863},"obj":"protein_molecule"},{"id":"T26","span":{"begin":865,"end":883},"obj":"protein_family_or_group"},{"id":"T27","span":{"begin":888,"end":901},"obj":"cell_type"},{"id":"T28","span":{"begin":964,"end":970},"obj":"protein_molecule"},{"id":"T29","span":{"begin":1066,"end":1073},"obj":"cell_type"},{"id":"T30","span":{"begin":1086,"end":1106},"obj":"other_name"},{"id":"T31","span":{"begin":1175,"end":1195},"obj":"other_name"}],"text":"Interferon-beta mediates stromal cell rescue of T cells from apoptosis.\nThe resolution of immune responses is characterized by extensive apoptosis of activated T cells. However, to generate and maintain immunological memory, some antigen-specific T cells must survive and revert to a resting G0/G1 state. Cytokines that bind to the common gamma chain of the IL-2 receptor promote the survival of T cell blasts, but also induce proliferation. In contrast, soluble factors secreted by stromal cells induce Tcell survival in a resting G0/G1 state. We now report that interferon-beta is the principal mediator of stromal cell-mediated Tcell rescue from apoptosis. Interferon-alpha and -beta promote the reversion of blast Tcells to a resting G0/G1 configuration with all the characteristic features of stromal cell rescue; such as high Bcl-XL expression and low Bcl-2. Type I interferons and stromal cells stimulate apparently identical signaling pathways, leading to STAT-1 activation. We also show that this mechanism may play a fundamental role in the persistence of T cells at sites of chronic inflammation; suggesting that chronic inflammation is an aberrant consequence of immunological memory."}