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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 25-36 protein denotes Ca2+-ATPase
T2 99-108 cell_type denotes platelets
T3 282-336 protein denotes sarco(endo)plasmic reticulum (SER) Ca2+-ATPase (SERCA)
T4 340-349 cell_type denotes platelets
T5 416-434 protein denotes serum lipoproteins
T6 624-629 protein denotes SERCA
T7 783-788 protein denotes SERCA
T8 810-837 protein denotes Ras-related protein (Rap) 1
T9 1031-1036 protein denotes SERCA
T10 1068-1072 protein denotes Rapl
T11 1264-1282 protein denotes serum lipoproteins
T12 1327-1332 protein denotes SERCA
T13 1373-1382 cell_type denotes platelets
T14 1520-1538 protein denotes serum lipoproteins

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 41-86 NP denotes freely exchangeable Ca2+ in the dense tubules
C3 114-119 NP denotes women
C2 99-119 NP denotes platelets from women
C4 167-172 NP denotes women
C5 199-257 NP denotes the freely exchangeable Ca2+ (FECa2+) in the dense tubules
C6 278-336 NP denotes the sarco(endo)plasmic reticulum (SER) Ca2+-ATPase (SERCA)
C8 397-411 NP denotes blood pressure
C9 416-434 NP denotes serum lipoproteins
C7 397-434 NP denotes blood pressure and serum lipoproteins
C10 508-518 NP denotes The FECa2+
C11 739-757 NP denotes platelet membranes
C12 841-859 NP denotes platelet membranes
C13 950-977 NP denotes FECa2+ in the dense tubules
C15 1027-1036 NP denotes the SERCA
C14 987-1036 NP denotes the maximal reaction velocity (Vmax) of the SERCA
C16 1246-1260 NP denotes blood pressure
C17 1264-1282 NP denotes serum lipoproteins
C18 1296-1306 NP denotes the FECa2+
C19 1311-1332 NP denotes the Vmax of the SERCA
C21 1388-1393 NP denotes women
C20 1373-1393 NP denotes platelets from women
C22 1407-1412 NP denotes women
C24 1501-1515 NP denotes blood pressure
C25 1520-1538 NP denotes serum lipoproteins
C23 1501-1538 NP denotes blood pressure and serum lipoproteins
R1 C4 C3 coref-ident women,women
R2 C5 C1 coref-ident the freely exchangeable Ca2+ (FECa2+) in the dense tubules,freely exchangeable Ca2+ in the dense tubules
R3 C12 C11 coref-ident platelet membranes,platelet membranes
R4 C13 C5 coref-ident FECa2+ in the dense tubules,the freely exchangeable Ca2+ (FECa2+) in the dense tubules
R5 C15 C6 coref-ident the SERCA,the sarco(endo)plasmic reticulum (SER) Ca2+-ATPase (SERCA)
R6 C16 C8 coref-ident blood pressure,blood pressure
R7 C17 C9 coref-ident serum lipoproteins,serum lipoproteins
R8 C18 C10 coref-ident the FECa2+,The FECa2+
R9 C19 C14 coref-ident the Vmax of the SERCA,the maximal reaction velocity (Vmax) of the SERCA
R10 C21 C4 coref-ident women,women
R11 C20 C2 coref-ident platelets from women,platelets from women
R12 C22 C21 coref-ident women,women
R13 C24 C16 coref-ident blood pressure,blood pressure
R14 C25 C17 coref-ident serum lipoproteins,serum lipoproteins
R15 C23 C7 coref-ident blood pressure and serum lipoproteins,blood pressure and serum lipoproteins

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-120 Sentence denotes The relationship between Ca2+-ATPase and freely exchangeable Ca2+ in the dense tubules: a study in platelets from women.
S2 121-435 Sentence denotes The main aims of this work were to examine in women: the relationship between the freely exchangeable Ca2+ (FECa2+) in the dense tubules and the activity of the sarco(endo)plasmic reticulum (SER) Ca2+-ATPase (SERCA) in platelets, and the relationship of these parameters with blood pressure and serum lipoproteins.
S3 436-507 Sentence denotes Platelets from 14 white and 13 black women in good health were studied.
S4 508-623 Sentence denotes The FECa2+ was measured as the ionomycin-evoked Ca2+ release (in the presence of thapsigargin) in Ca2+-free medium.
S5 624-758 Sentence denotes SERCA activity was measured as the thapsigargin sensitive, Ca2+ dependent and ouabain resistant, ATP hydrolyses in platelet membranes.
S6 759-899 Sentence denotes Relative expressions of SERCA 2 and 3 isoforms and Ras-related protein (Rap) 1 in platelet membranes were determined by Western immunoblots.
S7 900-1096 Sentence denotes Highly significant correlations were observed for FECa2+ in the dense tubules with: 1) the maximal reaction velocity (Vmax) of the SERCA (r = 0.592, P = .0014), and 2) Rapl (r = 0.551, P = .0035).
S8 1097-1190 Sentence denotes In addition, negative correlations were observed between FECa2+ in the dense tubules and age.
S9 1191-1283 Sentence denotes No correlations were observed for these variables with blood pressure or serum lipoproteins.
S10 1284-1394 Sentence denotes We conclude the FECa2+ and the Vmax of the SERCA are reliable indicators of Ca2+ load in platelets from women.
S11 1395-1539 Sentence denotes However, in women, unlike previous observations in men, these platelet parameters are not correlated with blood pressure and serum lipoproteins.

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 25-36 protein_molecule denotes Ca2+-ATPase
T2 41-65 atom denotes freely exchangeable Ca2+
T3 99-108 cell_type denotes platelets
T4 114-119 multi_cell denotes women
T5 167-172 multi_cell denotes women
T6 203-227 atom denotes freely exchangeable Ca2+
T7 229-235 atom denotes FECa2+
T8 282-310 cell_component denotes sarco(endo)plasmic reticulum
T9 312-315 cell_component denotes SER
T10 317-328 protein_family_or_group denotes Ca2+-ATPase
T11 330-335 protein_molecule denotes SERCA
T12 340-349 cell_type denotes platelets
T13 397-411 other_name denotes blood pressure
T14 416-434 protein_family_or_group denotes serum lipoproteins
T15 454-459 multi_cell denotes white
T16 467-478 multi_cell denotes black women
T17 512-518 atom denotes FECa2+
T18 539-555 other_name denotes ionomycin-evoked
T19 556-560 atom denotes Ca2+
T20 606-610 atom denotes Ca2+
T21 624-629 protein_molecule denotes SERCA
T22 683-687 atom denotes Ca2+
T23 702-709 other_organic_compound denotes ouabain
T24 739-757 cell_component denotes platelet membranes
T25 783-788 protein_molecule denotes SERCA
T26 810-837 protein_molecule denotes Ras-related protein (Rap) 1
T27 841-859 cell_component denotes platelet membranes
T28 879-898 other_name denotes Western immunoblots
T29 950-956 atom denotes FECa2+
T30 1031-1036 protein_molecule denotes SERCA
T31 1068-1072 protein_molecule denotes Rapl
T32 1154-1160 atom denotes FECa2+
T33 1246-1260 other_name denotes blood pressure
T34 1264-1282 protein_family_or_group denotes serum lipoproteins
T35 1300-1306 atom denotes FECa2+
T36 1327-1332 protein_molecule denotes SERCA
T37 1360-1364 atom denotes Ca2+
T38 1373-1382 cell_type denotes platelets
T39 1388-1393 multi_cell denotes women
T40 1407-1412 multi_cell denotes women
T41 1446-1449 multi_cell denotes men
T42 1501-1515 other_name denotes blood pressure
T43 1520-1538 protein_family_or_group denotes serum lipoproteins

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 244-249 HP_0011088 denotes dense
T2 964-969 HP_0011088 denotes dense
T3 1168-1173 HP_0011088 denotes dense