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PubMed:10089212 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-55 Sentence denotes The tat protein of HIV-1 induces galectin-3 expression.
TextSentencer_T2 56-170 Sentence denotes Animal lectins play important roles in a variety of biological processes via their recognition of glycoconjugates.
TextSentencer_T3 171-449 Sentence denotes Galectin-3 is a beta-galactoside-binding lectin whose expression is associated with various pathological processes including human T lymphotropic virus (HTLV)-I-infection of human T cell lines and human immunodeficiency virus (HIV) infection of T-lymphoblastic Molt-3 cell line.
TextSentencer_T4 450-618 Sentence denotes In the case of HIV-infected cells, it has been suggested that the increase in galectin-3 expression could be related to the expression of the viral regulatory gene tat.
TextSentencer_T5 619-743 Sentence denotes These results prompt us to perform more extensive analyses of the relationship between galectin-3 and HIV-1 Tat expressions.
TextSentencer_T6 744-862 Sentence denotes In this study, we found that Tat protein expression induces an upregulation of galectin-3 in several human cell lines.
TextSentencer_T7 863-1024 Sentence denotes In co-transfection experiments, the 5'-regulatory sequences of the galectin-3 gene were significantly upregulated by expression vectors encoding the Tat protein.
TextSentencer_T8 1025-1192 Sentence denotes Analysis performed with 5'-regulatory deleted sequences suggested that galectin-3 induction by Tat is dependent on activation of the Sp-1 binding transcription factor.
T1 0-55 Sentence denotes The tat protein of HIV-1 induces galectin-3 expression.
T2 56-170 Sentence denotes Animal lectins play important roles in a variety of biological processes via their recognition of glycoconjugates.
T3 171-449 Sentence denotes Galectin-3 is a beta-galactoside-binding lectin whose expression is associated with various pathological processes including human T lymphotropic virus (HTLV)-I-infection of human T cell lines and human immunodeficiency virus (HIV) infection of T-lymphoblastic Molt-3 cell line.
T4 450-618 Sentence denotes In the case of HIV-infected cells, it has been suggested that the increase in galectin-3 expression could be related to the expression of the viral regulatory gene tat.
T5 619-743 Sentence denotes These results prompt us to perform more extensive analyses of the relationship between galectin-3 and HIV-1 Tat expressions.
T6 744-862 Sentence denotes In this study, we found that Tat protein expression induces an upregulation of galectin-3 in several human cell lines.
T7 863-1024 Sentence denotes In co-transfection experiments, the 5'-regulatory sequences of the galectin-3 gene were significantly upregulated by expression vectors encoding the Tat protein.
T8 1025-1192 Sentence denotes Analysis performed with 5'-regulatory deleted sequences suggested that galectin-3 induction by Tat is dependent on activation of the Sp-1 binding transcription factor.
T1 0-55 Sentence denotes The tat protein of HIV-1 induces galectin-3 expression.
T2 56-170 Sentence denotes Animal lectins play important roles in a variety of biological processes via their recognition of glycoconjugates.
T3 171-449 Sentence denotes Galectin-3 is a beta-galactoside-binding lectin whose expression is associated with various pathological processes including human T lymphotropic virus (HTLV)-I-infection of human T cell lines and human immunodeficiency virus (HIV) infection of T-lymphoblastic Molt-3 cell line.
T4 450-618 Sentence denotes In the case of HIV-infected cells, it has been suggested that the increase in galectin-3 expression could be related to the expression of the viral regulatory gene tat.
T5 619-743 Sentence denotes These results prompt us to perform more extensive analyses of the relationship between galectin-3 and HIV-1 Tat expressions.
T6 744-862 Sentence denotes In this study, we found that Tat protein expression induces an upregulation of galectin-3 in several human cell lines.
T7 863-1024 Sentence denotes In co-transfection experiments, the 5'-regulatory sequences of the galectin-3 gene were significantly upregulated by expression vectors encoding the Tat protein.
T8 1025-1192 Sentence denotes Analysis performed with 5'-regulatory deleted sequences suggested that galectin-3 induction by Tat is dependent on activation of the Sp-1 binding transcription factor.

GlycoBiology-PACDB

Id Subject Object Predicate Lexical cue
_T1 368-401 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC512 denotes human immunodeficiency virus (HIV

ICD10

Id Subject Object Predicate Lexical cue
T1 368-401 http://purl.bioontology.org/ontology/ICD10/B24 denotes human immunodeficiency virus (HIV
T2 368-401 http://purl.bioontology.org/ontology/ICD10/Z71.7 denotes human immunodeficiency virus (HIV
T3 368-401 http://purl.bioontology.org/ontology/ICD10/B20-B24.9 denotes human immunodeficiency virus (HIV
T4 374-390 http://purl.bioontology.org/ontology/ICD10/D84.9 denotes immunodeficiency

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 8-15 FMAID:67257 denotes protein
_T2 8-15 FMAID:165447 denotes protein
_T3 154-169 FMAID:82782 denotes glycoconjugates
_T4 154-169 FMAID:196776 denotes glycoconjugates
_T5 416-431 FMAID:83031 denotes T-lymphoblastic
_T6 416-431 FMAID:197293 denotes T-lymphoblastic
_T7 416-431 FMAID:197292 denotes T-lymphoblastic
_T8 416-431 FMAID:83032 denotes T-lymphoblastic
_T9 418-431 FMAID:83030 denotes lymphoblastic
_T10 418-431 FMAID:197290 denotes lymphoblastic
_T11 478-483 FMAID:68646 denotes cells
_T12 478-483 FMAID:169002 denotes cells
_T13 609-613 FMAID:198663 denotes gene
_T14 777-784 FMAID:67257 denotes protein
_T15 777-784 FMAID:165447 denotes protein
_T16 902-922 FMAID:198077 denotes regulatory sequences
_T17 902-922 FMAID:84122 denotes regulatory sequences
_T18 941-945 FMAID:198663 denotes gene
_T19 1016-1023 FMAID:67257 denotes protein
_T20 1016-1023 FMAID:165447 denotes protein
_T21 1052-1080 FMAID:198077 denotes regulatory deleted sequences
_T22 1052-1080 FMAID:84122 denotes regulatory deleted sequences

uniprot-human

Id Subject Object Predicate Lexical cue
T1 33-43 http://www.uniprot.org/uniprot/P17931 denotes galectin-3
T2 528-538 http://www.uniprot.org/uniprot/P17931 denotes galectin-3
T3 706-716 http://www.uniprot.org/uniprot/P17931 denotes galectin-3
T4 823-833 http://www.uniprot.org/uniprot/P17931 denotes galectin-3
T5 930-940 http://www.uniprot.org/uniprot/P17931 denotes galectin-3
T6 1096-1106 http://www.uniprot.org/uniprot/P17931 denotes galectin-3

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 4-7 http://www.uniprot.org/uniprot/Q8QZR1 denotes tat
T2 614-617 http://www.uniprot.org/uniprot/Q8QZR1 denotes tat
T3 727-730 http://www.uniprot.org/uniprot/Q8QZR1 denotes Tat
T4 773-776 http://www.uniprot.org/uniprot/Q8QZR1 denotes Tat
T5 1012-1015 http://www.uniprot.org/uniprot/Q8QZR1 denotes Tat
T6 1120-1123 http://www.uniprot.org/uniprot/Q8QZR1 denotes Tat
T7 33-43 http://www.uniprot.org/uniprot/P16110 denotes galectin-3
T8 528-538 http://www.uniprot.org/uniprot/P16110 denotes galectin-3
T9 706-716 http://www.uniprot.org/uniprot/P16110 denotes galectin-3
T10 823-833 http://www.uniprot.org/uniprot/P16110 denotes galectin-3
T11 930-940 http://www.uniprot.org/uniprot/P16110 denotes galectin-3
T12 1096-1106 http://www.uniprot.org/uniprot/P16110 denotes galectin-3

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 56-62 http://purl.bioontology.org/ontology/STY/T008 denotes Animal
T2 187-191 http://purl.bioontology.org/ontology/NCBITAXON/3554 denotes beta
T3 187-191 http://purl.bioontology.org/ontology/NCBITAXON/158455 denotes beta
T4 296-322 http://purl.bioontology.org/ontology/NCBITAXON/318275 denotes human T lymphotropic virus
T5 317-322 http://purl.bioontology.org/ontology/NCBITAXON/184751 denotes virus
T6 368-396 http://purl.bioontology.org/ontology/NCBITAXON/12721 denotes human immunodeficiency virus
T7 368-396 http://purl.bioontology.org/ontology/NCBITAXON/11723 denotes human immunodeficiency virus
T8 368-396 http://purl.bioontology.org/ontology/NCBITAXON/11709 denotes human immunodeficiency virus
T9 368-396 http://purl.bioontology.org/ontology/NCBITAXON/11676 denotes human immunodeficiency virus
T10 374-396 http://purl.bioontology.org/ontology/NCBITAXON/11673 denotes immunodeficiency virus
T11 391-396 http://purl.bioontology.org/ontology/NCBITAXON/184751 denotes virus
T12 478-483 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T13 559-566 http://purl.bioontology.org/ontology/NCBITAXON/353209 denotes related
T14 866-868 http://purl.bioontology.org/ontology/NCBITAXON/13893 denotes co

GO-BP

Id Subject Object Predicate Lexical cue
T1 1171-1184 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

GO-MF

Id Subject Object Predicate Lexical cue
T1 192-211 http://purl.obolibrary.org/obo/GO_0016936 denotes galactoside-binding
T2 204-211 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T3 1163-1170 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T4 204-211 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T5 1163-1170 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T6 204-211 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T7 1163-1170 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T8 204-211 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T9 1163-1170 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T10 1163-1191 http://purl.obolibrary.org/obo/GO_0033613 denotes binding transcription factor
T11 1163-1191 http://purl.obolibrary.org/obo/GO_0043425 denotes binding transcription factor
T12 1163-1191 http://purl.obolibrary.org/obo/GO_0070491 denotes binding transcription factor
T13 1163-1191 http://purl.obolibrary.org/obo/GO_0008134 denotes binding transcription factor

GO-CC

Id Subject Object Predicate Lexical cue
T1 353-357 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T2 439-443 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T3 478-483 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 659-668 http://purl.obolibrary.org/obo/UBERON_2000106 denotes extensive

EDAM-topics

Id Subject Object Predicate Lexical cue
T1 8-15 http://edamontology.org/topic_0078 denotes protein
T2 56-62 http://edamontology.org/topic_3500 denotes Animal
T3 263-275 http://edamontology.org/topic_0634 denotes pathological
T4 296-301 http://edamontology.org/topic_2815 denotes human
T5 345-350 http://edamontology.org/topic_2815 denotes human
T6 368-373 http://edamontology.org/topic_2815 denotes human
T7 598-613 http://edamontology.org/topic_0204 denotes regulatory gene
T8 752-757 http://edamontology.org/topic_3678 denotes study
T9 777-784 http://edamontology.org/topic_0078 denotes protein
T10 777-795 http://edamontology.org/topic_0121 denotes protein expression
T11 777-795 http://edamontology.org/topic_0108 denotes protein expression
T12 845-850 http://edamontology.org/topic_2815 denotes human
T13 913-922 http://edamontology.org/topic_0080 denotes sequences
T14 913-922 http://edamontology.org/topic_3168 denotes sequences
T15 1016-1023 http://edamontology.org/topic_0078 denotes protein
T16 1071-1080 http://edamontology.org/topic_3168 denotes sequences
T17 1071-1080 http://edamontology.org/topic_0080 denotes sequences
T18 1171-1184 http://edamontology.org/topic_0110 denotes transcription
T19 1171-1184 http://edamontology.org/topic_0203 denotes transcription
T20 1171-1184 http://edamontology.org/topic_3512 denotes transcription
T21 1171-1184 http://edamontology.org/topic_3308 denotes transcription
T22 1171-1191 http://edamontology.org/topic_0749 denotes transcription factor

EDAM-DFO

Id Subject Object Predicate Lexical cue
T1 8-15 http://edamontology.org/format_1208 denotes protein
T2 8-15 http://edamontology.org/data_1467 denotes protein
T3 119-128 http://edamontology.org/operation_2409 denotes processes
T4 119-128 http://edamontology.org/operation_0004 denotes processes
T5 139-150 http://edamontology.org/operation_2423 denotes recognition
T6 276-285 http://edamontology.org/operation_0004 denotes processes
T7 276-285 http://edamontology.org/operation_2409 denotes processes
T8 353-367 http://edamontology.org/data_0963 denotes cell lines and
T9 777-784 http://edamontology.org/data_1467 denotes protein
T10 777-784 http://edamontology.org/format_1208 denotes protein
T11 913-922 http://edamontology.org/data_2044 denotes sequences
T12 913-922 http://edamontology.org/operation_3218 denotes sequences
T13 1016-1023 http://edamontology.org/format_1208 denotes protein
T14 1016-1023 http://edamontology.org/data_1467 denotes protein
T15 1016-1033 http://edamontology.org/operation_2502 denotes protein. Analysis
T16 1016-1033 http://edamontology.org/operation_2415 denotes protein. Analysis
T17 1025-1033 http://edamontology.org/operation_2945 denotes Analysis
T18 1071-1080 http://edamontology.org/data_2044 denotes sequences
T19 1071-1080 http://edamontology.org/operation_3218 denotes sequences
T20 1171-1191 http://edamontology.org/data_2911 denotes transcription factor
T21 1171-1191 http://edamontology.org/data_2755 denotes transcription factor

Lectin

Id Subject Object Predicate Lexical cue
Lectin_T1 171-179 https://acgg.asia/db/lfdb/LfDB0270 denotes Galectin
Lectin_T2 171-179 https://acgg.asia/db/lfdb/LfDB0272 denotes Galectin
Lectin_T3 171-179 https://acgg.asia/db/lfdb/LfDB0274 denotes Galectin

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 659-668 http://purl.obolibrary.org/obo/UBERON_2000106 denotes extensive

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 374-390 HP_0002721 denotes immunodeficiency

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 332-341 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T2 374-390 Disease denotes immunodeficiency http://purl.obolibrary.org/obo/MONDO_0021094
T3 397-412 Disease denotes (HIV) infection http://purl.obolibrary.org/obo/MONDO_0005109

Lectin-Jamboree

Id Subject Object Predicate Lexical cue
T1 63-70 lectin denotes lectins
T2 212-218 lectin denotes lectin

Lectin-Jamboree-Sentence

Id Subject Object Predicate Lexical cue
T1 0-55 Sentence denotes The tat protein of HIV-1 induces galectin-3 expression.
T2 56-170 Sentence denotes Animal lectins play important roles in a variety of biological processes via their recognition of glycoconjugates.
T3 171-449 Sentence denotes Galectin-3 is a beta-galactoside-binding lectin whose expression is associated with various pathological processes including human T lymphotropic virus (HTLV)-I-infection of human T cell lines and human immunodeficiency virus (HIV) infection of T-lymphoblastic Molt-3 cell line.
T4 450-618 Sentence denotes In the case of HIV-infected cells, it has been suggested that the increase in galectin-3 expression could be related to the expression of the viral regulatory gene tat.
T5 619-743 Sentence denotes These results prompt us to perform more extensive analyses of the relationship between galectin-3 and HIV-1 Tat expressions.
T6 744-862 Sentence denotes In this study, we found that Tat protein expression induces an upregulation of galectin-3 in several human cell lines.
T7 863-1024 Sentence denotes In co-transfection experiments, the 5'-regulatory sequences of the galectin-3 gene were significantly upregulated by expression vectors encoding the Tat protein.
T8 1025-1192 Sentence denotes Analysis performed with 5'-regulatory deleted sequences suggested that galectin-3 induction by Tat is dependent on activation of the Sp-1 binding transcription factor.

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 296-301 OrganismTaxon denotes human 9606
T2 345-350 OrganismTaxon denotes human 9606
T3 368-373 OrganismTaxon denotes human 9606
T4 845-850 OrganismTaxon denotes human 9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 351-357 Body_part denotes T cell http://purl.obolibrary.org/obo/CL_0000084

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 374-390 Phenotype denotes immunodeficiency HP:0002721

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 351-357 Cell denotes T cell http://purl.obolibrary.org/obo/CL:0000084
T2 418-431 Cell denotes lymphoblastic http://purl.obolibrary.org/obo/CL:0017005