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PMC:7795856 / 23355-24964 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
413 106-109 Gene denotes Tα1 Gene:134864
414 374-377 Gene denotes Tα1 Gene:134864
415 1106-1109 Gene denotes Tα1 Gene:134864
416 1225-1228 Gene denotes Tα1 Gene:134864
417 1268-1271 Gene denotes Tα1 Gene:134864
418 100-105 Species denotes human Tax:9606
419 150-157 Species denotes E. coli Tax:562
420 368-373 Species denotes human Tax:9606
421 416-423 Species denotes E. coli Tax:562
422 1244-1258 Species denotes synthetic gene Tax:2005392
423 1262-1267 Species denotes human Tax:9606
424 532-539 Chemical denotes alanine MESH:D000409
425 812-824 Chemical denotes tetracycline MESH:D013752

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T133 0-4 Sentence denotes 4.1.
T134 5-43 Sentence denotes Construction of the Expression Plasmid
T135 44-331 Sentence denotes A bicistronic operon for the simultaneous expression of human Tα1 (UniProt P06454, residues 2–29) and the E. coli N-acetyltransferase RimJ (UniProt P0A948) flanked by the restriction sites NdeI and HindIII was prepared using gene synthesis (Thermofisher Scientific, Regensburg, Germany).
T136 332-672 Sentence denotes To this end, the coding sequence of human Tα1 was codon-optimized for expression in E. coli and linked to the RimJ structural gene via the nucleotide sequence GCCTGAAGAGCAGAAAATAAA comprising a “GCC” alanine codon, the opal stop codon “TGA”, a SapI restriction site for insertion of the PAS gene cassette, and a ribosome-binding site (RBS).
T137 673-852 Sentence denotes The entire gene fragment was subcloned via NdeI and HindIII on a derivative of pASK75 [36] for cytoplasmic expression under control of the tetracycline promoter/operator (tetp/o).
T138 853-1143 Sentence denotes Subsequently, a substantially non-repetitive sequence-verified PAS gene cassette [34] encoding a PAS#1 polypeptide of 601 amino acids was inserted via the SapI restriction site to create the expression vector for the C-terminally PASylated thymosin α1 (Tα1-PAS), pASK75-Tα1-PAS#1(600)/RimJ.
T139 1144-1406 Sentence denotes To construct a plasmid for the bacterial production of an N-terminally PASylated Tα1 (PAS-Tα1), the synthetic gene of human Tα1 was amplified via PCR using the primers THY-For (5’-AGCTCTTCTGCCAGTGATGCAGCAGTTGATACC) and THY-Rev (5’-GCTCAAGCTTAGTTCTCGGCTTCTTCCAC).
T140 1407-1609 Sentence denotes The PCR product was digested with SapI and HindIII and inserted via these restriction sites downstream of the PAS#1(600) sequence preceded by Met and Pro encoded on a suitable pASK75 plasmid derivative.