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PMC:7784834 / 31961-33285 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
431 123-128 Gene denotes spike Gene:43740568
432 901-906 Gene denotes spike Gene:43740568
433 622-627 Gene denotes spike Gene:43740568
434 1291-1296 Gene denotes spike Gene:43740568
435 836-841 Gene denotes spike Gene:43740568
436 9-17 Chemical denotes hydrogen MESH:D006859
437 60-68 Chemical denotes hydrogen MESH:D006859
438 96-101 Chemical denotes water MESH:D014867
439 143-151 Chemical denotes hydrogen MESH:D006859
440 207-215 Chemical denotes hydrogen MESH:D006859
441 265-273 Chemical denotes hydrogen MESH:D006859
442 302-310 Chemical denotes hydrogen MESH:D006859
443 395-403 Chemical denotes hydrogen MESH:D006859
444 535-543 Chemical denotes hydrogen MESH:D006859
445 600-608 Chemical denotes hydrogen MESH:D006859
446 717-725 Chemical denotes hydrogen MESH:D006859
447 1213-1221 Chemical denotes hydrogen MESH:D006859

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T221 0-223 Sentence denotes Further, hydrogen bond analysis revealed a higher number of hydrogen bonds with the surrounding water molecules in case of spike protein (2300 hydrogen bonds) than in complex with rutin (approximately, 2200 hydrogen bonds).
T222 224-377 Sentence denotes Similarly, in case of main protease, 700 hydrogen bonds were formed while 560 hydrogen bonds in case of main protease complex with rutin (Figure 6(A,B)).
T223 378-577 Sentence denotes In addition, the hydrogen bond landscape assessed against the inhibitor revealed the dynamic equilibration of the complex trajectories with a high number of hydrogen bonds, as shown in Figure 6(C,D).
T224 578-690 Sentence denotes The average number of hydrogen bonds within spike-rutin and main protease-rutin are 3.72 and 2.29, respectively.
T225 691-869 Sentence denotes The consistent numbers of hydrogen bonds were observed which contributed significantly to the proximal binding of the potent drug rutin with the spike and main protease receptor.
T226 870-1015 Sentence denotes The superimposed structures of spike protein and main protease both in complex with rutin before and after simulations is shown in Figure 7(A,B).
T227 1016-1145 Sentence denotes Further, these results were strengthened by the vital contribution of the complex binding energies throughout the simulation run.
T228 1146-1324 Sentence denotes These calculations with consistent high binding energies and large hydrogen bonds involvement demonstrated the stable binding of rutin with both spike and main protease proteins.