PMC:7755033 / 101664-102202 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"1950","span":{"begin":315,"end":321},"obj":"Gene"},{"id":"1951","span":{"begin":323,"end":326},"obj":"Gene"},{"id":"1952","span":{"begin":43,"end":46},"obj":"Gene"},{"id":"1953","span":{"begin":17,"end":27},"obj":"Species"},{"id":"1954","span":{"begin":304,"end":314},"obj":"Species"},{"id":"1955","span":{"begin":62,"end":75},"obj":"Chemical"}],"attributes":[{"id":"A1950","pred":"tao:has_database_id","subj":"1950","obj":"Gene:43740578"},{"id":"A1951","pred":"tao:has_database_id","subj":"1951","obj":"Gene:5131"},{"id":"A1952","pred":"tao:has_database_id","subj":"1952","obj":"Gene:5131"},{"id":"A1953","pred":"tao:has_database_id","subj":"1953","obj":"Tax:2697049"},{"id":"A1954","pred":"tao:has_database_id","subj":"1954","obj":"Tax:2697049"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"MD Simulation of SARS-CoV-2 main protease (PDB ID: 6LU7) with withanolide A using LARMD online server. (A) Ligand-protein conformation (B) RMSD of receptor and ligand (C) RMSD histogram of receptor (D) RMSD histogram of ligand (E) Radius of gyration- Rg value (F) Fraction of native contacts analysis of SARS-CoV-2 PL-pro (PDB ID: 6W9C) with withanolide A, over a time frame of 4000ps (4 ns) (G) RMSF value of each residue (H) B-factor value (changing from blue to red with increase in value) and (I) B-factor analysis of defined complex."}

{"project":"LitCovid-sentences","denotations":[{"id":"T1056","span":{"begin":0,"end":50},"obj":"Sentence"},{"id":"T1057","span":{"begin":51,"end":330},"obj":"Sentence"},{"id":"T1058","span":{"begin":331,"end":538},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"MD Simulation of SARS-CoV-2 main protease (PDB ID: 6LU7) with withanolide A using LARMD online server. (A) Ligand-protein conformation (B) RMSD of receptor and ligand (C) RMSD histogram of receptor (D) RMSD histogram of ligand (E) Radius of gyration- Rg value (F) Fraction of native contacts analysis of SARS-CoV-2 PL-pro (PDB ID: 6W9C) with withanolide A, over a time frame of 4000ps (4 ns) (G) RMSF value of each residue (H) B-factor value (changing from blue to red with increase in value) and (I) B-factor analysis of defined complex."}