> top > docs > PMC:7640975 > spans > 57505-58859 > annotations

PMC:7640975 / 57505-58859 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T483 118-123 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T484 325-330 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T485 455-460 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T486 490-494 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T487 1115-1119 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T488 1337-1342 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T106 271-280 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T107 414-423 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T108 594-603 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T635 25-34 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T636 118-123 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T637 178-188 http://purl.obolibrary.org/obo/CLO_0001658 denotes activation
T638 215-224 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T639 294-303 http://purl.obolibrary.org/obo/CLO_0001658 denotes activated
T640 325-330 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T641 370-371 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T642 447-460 http://purl.obolibrary.org/obo/CLO_0052497 denotes LLC-PK1 cells
T643 461-463 http://purl.obolibrary.org/obo/CLO_0054055 denotes 71
T644 478-479 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T645 490-499 http://purl.obolibrary.org/obo/CLO_0000031 denotes cell line
T646 782-791 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T647 1106-1119 http://purl.obolibrary.org/obo/CLO_0053408 denotes AKT2 and cell
T648 1126-1135 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T649 1283-1292 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T650 1337-1342 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T328 7-11 http://purl.obolibrary.org/obo/GO_0016303 denotes PI3K
T329 25-43 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathways
T330 25-34 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T331 201-205 http://purl.obolibrary.org/obo/GO_0016303 denotes PI3K
T332 215-232 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T333 215-224 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T334 304-313 http://purl.obolibrary.org/obo/GO_0016236 denotes autophagy
T335 304-313 http://purl.obolibrary.org/obo/GO_0006914 denotes autophagy
T336 434-443 http://purl.obolibrary.org/obo/GO_0016236 denotes autophagy
T337 434-443 http://purl.obolibrary.org/obo/GO_0006914 denotes autophagy
T338 567-576 http://purl.obolibrary.org/obo/GO_0016236 denotes autophagy
T339 567-576 http://purl.obolibrary.org/obo/GO_0006914 denotes autophagy
T340 630-639 http://purl.obolibrary.org/obo/GO_0016236 denotes autophagy
T341 630-639 http://purl.obolibrary.org/obo/GO_0006914 denotes autophagy
T342 643-660 http://purl.obolibrary.org/obo/GO_0019079 denotes viral replication
T343 643-660 http://purl.obolibrary.org/obo/GO_0019058 denotes viral replication
T344 729-738 http://purl.obolibrary.org/obo/GO_0016236 denotes autophagy
T345 729-738 http://purl.obolibrary.org/obo/GO_0006914 denotes autophagy
T346 768-772 http://purl.obolibrary.org/obo/GO_0016303 denotes PI3K
T347 782-799 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T348 782-791 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T349 893-913 http://purl.obolibrary.org/obo/GO_0010506 denotes regulating autophagy
T350 904-913 http://purl.obolibrary.org/obo/GO_0016236 denotes autophagy
T351 904-913 http://purl.obolibrary.org/obo/GO_0006914 denotes autophagy
T352 1101-1105 http://purl.obolibrary.org/obo/GO_0004740 denotes PDK1
T353 1115-1125 http://purl.obolibrary.org/obo/GO_0007049 denotes cell cycle
T354 1126-1144 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathways
T355 1126-1135 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T356 1283-1301 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathways
T357 1283-1292 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T336 234-331 Sentence denotes Accordingly, we speculate that PDCoV infection successfully activated autophagy in IPEC-J2 cells.
T337 332-500 Sentence denotes Our speculation was in agreement with a recent research which revealed that PDCoV infection triggered autophagy in LLC-PK1 cells,71 despite using a different cell line.
T338 501-739 Sentence denotes Undoubtedly, further studies are definitely needed to confirm the autophagy induced by PDCoV infection, to analyze the impact of autophagy on viral replication and to explore the underlying molecular mechanisms of PDCoV-induced autophagy.
T339 740-914 Sentence denotes It should be noted that the PI3K-AKT-mTOR signaling pathway also plays an important role in many physiological and pathological conditions,69 except for regulating autophagy.
T340 915-1145 Sentence denotes Finally, we sought to uncover the hidden interaction networks among the DEPs using STRING analysis, and discovered three major functional networks consisting of the RIG-I-like receptor, PDK1-AKT2 and cell cycle signaling pathways.
T341 1146-1343 Sentence denotes These findings are in accordance with the results of KEGG pathway analysis, thus further consolidating the credibility of these putative signaling pathways involved in PDCoV-infected IPEC-J2 cells.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1113 12-15 Gene denotes AKT Gene:207
1114 20-24 Gene denotes mTOR Gene:2475
1115 206-209 Gene denotes AKT Gene:100126861
1116 210-214 Gene denotes mTOR Gene:100127359
1117 773-776 Gene denotes AKT Gene:207
1118 777-781 Gene denotes mTOR Gene:2475
1125 95-109 Disease denotes PDCoV-infected MESH:D007239
1126 271-280 Disease denotes infection MESH:D007239
1127 414-423 Disease denotes infection MESH:D007239
1128 594-603 Disease denotes infection MESH:D007239
1130 110-117 CellLine denotes IPEC-J2 CVCL:2246
1131 317-324 CellLine denotes IPEC-J2 CVCL:2246
1163 1101-1105 Gene denotes PDK1 Gene:5163
1164 1106-1110 Gene denotes AKT2 Gene:208
1188 1314-1328 Disease denotes PDCoV-infected MESH:D007239
1192 1329-1336 CellLine denotes IPEC-J2 CVCL:2246