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PMC:7640975 / 43821-44959 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T379 57-65 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T380 88-93 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T381 183-191 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T382 527-535 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T383 623-631 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T384 704-712 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T385 783-791 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T72 105-114 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T73 375-377 Disease denotes HD http://purl.obolibrary.org/obo/MONDO_0007739

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T497 88-93 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T498 117-118 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T499 359-364 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T500 486-488 http://purl.obolibrary.org/obo/PR_000005794 denotes CP
T501 555-556 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T502 893-894 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T503 1121-1125 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T403 57-65 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T404 183-191 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T405 375-377 Chemical denotes HD http://purl.obolibrary.org/obo/CHEBI_73925
T406 412-415 Chemical denotes GIP http://purl.obolibrary.org/obo/CHEBI_80165
T407 486-488 Chemical denotes CP http://purl.obolibrary.org/obo/CHEBI_3380|http://purl.obolibrary.org/obo/CHEBI_73461
T409 527-535 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T410 623-631 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T411 704-712 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T412 783-791 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T211 343-353 http://purl.obolibrary.org/obo/GO_0008152 denotes metabolism
T212 466-484 http://purl.obolibrary.org/obo/GO_0009987 denotes cellular processes
T213 486-488 http://purl.obolibrary.org/obo/GO_0009987 denotes CP

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T285 193-490 Sentence denotes The ordinate text indicates the name of biological functions which were classified into 6 KEGG pathway categories, including organismal systems (OS), metabolism (M), human diseases (HD), genetic information processing (GIP), environmental information processing (EIP), and cellular processes (CP).
T286 491-792 Sentence denotes The abscissa displays the number of proteins in each category. (B) The top 20 significant pathways of the significantly upregulated proteins. (C) The top 20 significant pathways of the significantly downregulated proteins. (D) KEGG pathway enrichment analysis of the differentially expressed proteins.
T287 793-869 Sentence denotes The abscissa text displays the name and classification of the KEGG pathways.
T288 870-961 Sentence denotes Each column represents a pathway, and the height of the column implies the enrichment rate.
T289 962-1138 Sentence denotes The color manifests the significance of the enrichment (p-value), and the darker the color, the more significant the enrichment of the pathway (Fisher’s exact test; *p < 0.05).

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
752 359-364 Species denotes human Tax:9606
753 105-114 Disease denotes infection MESH:D007239
754 375-377 Disease denotes HD MESH:D006816
755 80-87 CellLine denotes IPEC-J2 CVCL:2246