PMC:7640975 / 15147-15521 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T103","span":{"begin":223,"end":230},"obj":"Body_part"},{"id":"T104","span":{"begin":349,"end":356},"obj":"Body_part"}],"attributes":[{"id":"A103","pred":"fma_id","subj":"T103","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A104","pred":"fma_id","subj":"T104","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"yl (C); maximum missed cleavages, 2; precursor mass tolerance, 10 ppm; fragment mass tolerance, 0.05 Da; validation based on, q-value. To guarantee the accuracy of the MS data analysis, the cutoff value for the peptide and protein confidences was set to \u003e95% and \u003e1.20, respectively, coupled with a false discovery rate (FDR) of ≤1% for peptide and protein identifications. "}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T213","span":{"begin":101,"end":103},"obj":"http://www.ebi.ac.uk/efo/EFO_0000265"},{"id":"T214","span":{"begin":168,"end":170},"obj":"http://purl.obolibrary.org/obo/CLO_0007874"},{"id":"T215","span":{"begin":211,"end":218},"obj":"http://purl.obolibrary.org/obo/PR_000018263"},{"id":"T216","span":{"begin":297,"end":298},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T217","span":{"begin":337,"end":344},"obj":"http://purl.obolibrary.org/obo/PR_000018263"}],"text":"yl (C); maximum missed cleavages, 2; precursor mass tolerance, 10 ppm; fragment mass tolerance, 0.05 Da; validation based on, q-value. To guarantee the accuracy of the MS data analysis, the cutoff value for the peptide and protein confidences was set to \u003e95% and \u003e1.20, respectively, coupled with a false discovery rate (FDR) of ≤1% for peptide and protein identifications. "}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T120","span":{"begin":168,"end":170},"obj":"Chemical"},{"id":"T121","span":{"begin":211,"end":218},"obj":"Chemical"},{"id":"T122","span":{"begin":223,"end":230},"obj":"Chemical"},{"id":"T123","span":{"begin":337,"end":344},"obj":"Chemical"},{"id":"T124","span":{"begin":349,"end":356},"obj":"Chemical"}],"attributes":[{"id":"A120","pred":"chebi_id","subj":"T120","obj":"http://purl.obolibrary.org/obo/CHEBI_73613"},{"id":"A121","pred":"chebi_id","subj":"T121","obj":"http://purl.obolibrary.org/obo/CHEBI_16670"},{"id":"A122","pred":"chebi_id","subj":"T122","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A123","pred":"chebi_id","subj":"T123","obj":"http://purl.obolibrary.org/obo/CHEBI_16670"},{"id":"A124","pred":"chebi_id","subj":"T124","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"yl (C); maximum missed cleavages, 2; precursor mass tolerance, 10 ppm; fragment mass tolerance, 0.05 Da; validation based on, q-value. To guarantee the accuracy of the MS data analysis, the cutoff value for the peptide and protein confidences was set to \u003e95% and \u003e1.20, respectively, coupled with a false discovery rate (FDR) of ≤1% for peptide and protein identifications. "}

{"project":"LitCovid-sentences","denotations":[{"id":"T83","span":{"begin":135,"end":373},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"yl (C); maximum missed cleavages, 2; precursor mass tolerance, 10 ppm; fragment mass tolerance, 0.05 Da; validation based on, q-value. To guarantee the accuracy of the MS data analysis, the cutoff value for the peptide and protein confidences was set to \u003e95% and \u003e1.20, respectively, coupled with a false discovery rate (FDR) of ≤1% for peptide and protein identifications. "}

{"project":"LitCovid-PubTator","denotations":[{"id":"267","span":{"begin":4,"end":15},"obj":"Species"}],"attributes":[{"id":"A267","pred":"tao:has_database_id","subj":"267","obj":"Tax:13423"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"yl (C); maximum missed cleavages, 2; precursor mass tolerance, 10 ppm; fragment mass tolerance, 0.05 Da; validation based on, q-value. To guarantee the accuracy of the MS data analysis, the cutoff value for the peptide and protein confidences was set to \u003e95% and \u003e1.20, respectively, coupled with a false discovery rate (FDR) of ≤1% for peptide and protein identifications. "}