PMC:7605643 / 9294-9882
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T34 | 366-374 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T35 | 479-486 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T36 | 487-494 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T76 | 281-282 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T77 | 405-414 | http://purl.obolibrary.org/obo/SO_0000418 | denotes | signaling |
| T78 | 440-441 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T55 | 366-374 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T56 | 479-486 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T57 | 487-494 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T58 | 543-545 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
| T60 | 560-562 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14 | 405-414 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T77 | 0-103 | Sentence | denotes | Cytoscape v3.7.2 was used to create master network, which comprised of total 2693 nodes and 3736 edges. |
| T78 | 104-285 | Sentence | denotes | The master network had clustering coefficient of 0.562 and was divided into clusters using k-means clustering and the most tightly knit cluster around ACE2 was chosen (Figure 1(a)). |
| T79 | 286-345 | Sentence | denotes | Network Analysis revealed various hub nodes in the network. |
| T80 | 346-444 | Sentence | denotes | Hub nodes are those proteins which control the disperse of signaling in the network (Figure 1(a)). |
| T81 | 445-588 | Sentence | denotes | Major hub nodes obtained from the protein-protein interaction network was ACE2, INS, AKT1, VEGFA, IL-6, NOS3, JUN, IL-10, HIF1A etc. (Table 1). |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 220 | 255-259 | Gene | denotes | ACE2 | Gene:59272 |
| 221 | 519-523 | Gene | denotes | ACE2 | Gene:59272 |
| 222 | 530-534 | Gene | denotes | AKT1 | Gene:207 |
| 223 | 536-541 | Gene | denotes | VEGFA | Gene:7422 |
| 224 | 543-547 | Gene | denotes | IL-6 | Gene:3569 |
| 225 | 560-565 | Gene | denotes | IL-10 | Gene:3586 |
| 226 | 567-572 | Gene | denotes | HIF1A | Gene:3091 |
| 227 | 451-454 | Gene | denotes | hub | Gene:1993 |
| 228 | 346-349 | Gene | denotes | Hub | Gene:1993 |
| 229 | 320-323 | Gene | denotes | hub | Gene:1993 |