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PMC:7605643 / 8684-9284 JSONTXT

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LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T29 376-378 Disease denotes XP http://purl.obolibrary.org/obo/MONDO_0019600

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T70 118-121 http://purl.obolibrary.org/obo/CLO_0050167 denotes LLC
T71 133-135 http://purl.obolibrary.org/obo/CLO_0009877 denotes NY
T72 290-293 http://purl.obolibrary.org/obo/CLO_0050167 denotes LLC
T73 305-307 http://purl.obolibrary.org/obo/CLO_0009877 denotes NY
T74 463-466 http://purl.obolibrary.org/obo/CLO_0050167 denotes LLC
T75 478-480 http://purl.obolibrary.org/obo/CLO_0009877 denotes NY

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T50 133-135 Chemical denotes NY http://purl.obolibrary.org/obo/CHEBI_73427
T51 186-193 Chemical denotes ligands http://purl.obolibrary.org/obo/CHEBI_52214
T52 305-307 Chemical denotes NY http://purl.obolibrary.org/obo/CHEBI_73427
T53 478-480 Chemical denotes NY http://purl.obolibrary.org/obo/CHEBI_73427
T54 548-554 Chemical denotes ligand http://purl.obolibrary.org/obo/CHEBI_52214

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T69 0-95 Sentence denotes ACE2 was downloaded from PDB database in Maestro v12.3 environment (Schrödinger Release 2020-1:
T70 96-177 Sentence denotes Maestro, Schrödinger, LLC, New York, NY, 2020) and prepared for docking analysis.
T71 178-267 Sentence denotes All the ligands of N. sativa were processed by using LigPrep (Schrödinger Release 2020-1:
T72 268-358 Sentence denotes LigPrep, Schrödinger, LLC, New York, NY, 2020) to generate all the possible stereoisomers.
T73 359-442 Sentence denotes Extra-Precision (XP) docking was performed using Glide (Schrödinger Release 2020-1:
T74 443-488 Sentence denotes Glide, Schrödinger, LLC, New York, NY, 2020).
T75 489-600 Sentence denotes Docking analysis was performed to analyse the best binding ligand from N. sativa constituents to ACE2 receptor.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
206 0-4 Gene denotes ACE2 Gene:59272
207 586-590 Gene denotes ACE2 Gene:59272
208 197-206 Species denotes N. sativa Tax:555479
209 560-569 Species denotes N. sativa Tax:555479