PMC:7605643 / 8684-9284 JSONTXT

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T29","span":{"begin":376,"end":378},"obj":"Disease"}],"attributes":[{"id":"A29","pred":"mondo_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/MONDO_0019600"}],"text":"ACE2 was downloaded from PDB database in Maestro v12.3 environment (Schrödinger Release 2020-1: Maestro, Schrödinger, LLC, New York, NY, 2020) and prepared for docking analysis. All the ligands of N. sativa were processed by using LigPrep (Schrödinger Release 2020-1: LigPrep, Schrödinger, LLC, New York, NY, 2020) to generate all the possible stereoisomers. Extra-Precision (XP) docking was performed using Glide (Schrödinger Release 2020-1: Glide, Schrödinger, LLC, New York, NY, 2020). Docking analysis was performed to analyse the best binding ligand from N. sativa constituents to ACE2 receptor."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T70","span":{"begin":118,"end":121},"obj":"http://purl.obolibrary.org/obo/CLO_0050167"},{"id":"T71","span":{"begin":133,"end":135},"obj":"http://purl.obolibrary.org/obo/CLO_0009877"},{"id":"T72","span":{"begin":290,"end":293},"obj":"http://purl.obolibrary.org/obo/CLO_0050167"},{"id":"T73","span":{"begin":305,"end":307},"obj":"http://purl.obolibrary.org/obo/CLO_0009877"},{"id":"T74","span":{"begin":463,"end":466},"obj":"http://purl.obolibrary.org/obo/CLO_0050167"},{"id":"T75","span":{"begin":478,"end":480},"obj":"http://purl.obolibrary.org/obo/CLO_0009877"}],"text":"ACE2 was downloaded from PDB database in Maestro v12.3 environment (Schrödinger Release 2020-1: Maestro, Schrödinger, LLC, New York, NY, 2020) and prepared for docking analysis. All the ligands of N. sativa were processed by using LigPrep (Schrödinger Release 2020-1: LigPrep, Schrödinger, LLC, New York, NY, 2020) to generate all the possible stereoisomers. Extra-Precision (XP) docking was performed using Glide (Schrödinger Release 2020-1: Glide, Schrödinger, LLC, New York, NY, 2020). Docking analysis was performed to analyse the best binding ligand from N. sativa constituents to ACE2 receptor."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T50","span":{"begin":133,"end":135},"obj":"Chemical"},{"id":"T51","span":{"begin":186,"end":193},"obj":"Chemical"},{"id":"T52","span":{"begin":305,"end":307},"obj":"Chemical"},{"id":"T53","span":{"begin":478,"end":480},"obj":"Chemical"},{"id":"T54","span":{"begin":548,"end":554},"obj":"Chemical"}],"attributes":[{"id":"A50","pred":"chebi_id","subj":"T50","obj":"http://purl.obolibrary.org/obo/CHEBI_73427"},{"id":"A51","pred":"chebi_id","subj":"T51","obj":"http://purl.obolibrary.org/obo/CHEBI_52214"},{"id":"A52","pred":"chebi_id","subj":"T52","obj":"http://purl.obolibrary.org/obo/CHEBI_73427"},{"id":"A53","pred":"chebi_id","subj":"T53","obj":"http://purl.obolibrary.org/obo/CHEBI_73427"},{"id":"A54","pred":"chebi_id","subj":"T54","obj":"http://purl.obolibrary.org/obo/CHEBI_52214"}],"text":"ACE2 was downloaded from PDB database in Maestro v12.3 environment (Schrödinger Release 2020-1: Maestro, Schrödinger, LLC, New York, NY, 2020) and prepared for docking analysis. All the ligands of N. sativa were processed by using LigPrep (Schrödinger Release 2020-1: LigPrep, Schrödinger, LLC, New York, NY, 2020) to generate all the possible stereoisomers. Extra-Precision (XP) docking was performed using Glide (Schrödinger Release 2020-1: Glide, Schrödinger, LLC, New York, NY, 2020). Docking analysis was performed to analyse the best binding ligand from N. sativa constituents to ACE2 receptor."}

{"project":"LitCovid-sentences","denotations":[{"id":"T69","span":{"begin":0,"end":95},"obj":"Sentence"},{"id":"T70","span":{"begin":96,"end":177},"obj":"Sentence"},{"id":"T71","span":{"begin":178,"end":267},"obj":"Sentence"},{"id":"T72","span":{"begin":268,"end":358},"obj":"Sentence"},{"id":"T73","span":{"begin":359,"end":442},"obj":"Sentence"},{"id":"T74","span":{"begin":443,"end":488},"obj":"Sentence"},{"id":"T75","span":{"begin":489,"end":600},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"ACE2 was downloaded from PDB database in Maestro v12.3 environment (Schrödinger Release 2020-1: Maestro, Schrödinger, LLC, New York, NY, 2020) and prepared for docking analysis. All the ligands of N. sativa were processed by using LigPrep (Schrödinger Release 2020-1: LigPrep, Schrödinger, LLC, New York, NY, 2020) to generate all the possible stereoisomers. Extra-Precision (XP) docking was performed using Glide (Schrödinger Release 2020-1: Glide, Schrödinger, LLC, New York, NY, 2020). Docking analysis was performed to analyse the best binding ligand from N. sativa constituents to ACE2 receptor."}

{"project":"LitCovid-PubTator","denotations":[{"id":"206","span":{"begin":0,"end":4},"obj":"Gene"},{"id":"207","span":{"begin":586,"end":590},"obj":"Gene"},{"id":"208","span":{"begin":197,"end":206},"obj":"Species"},{"id":"209","span":{"begin":560,"end":569},"obj":"Species"}],"attributes":[{"id":"A206","pred":"tao:has_database_id","subj":"206","obj":"Gene:59272"},{"id":"A207","pred":"tao:has_database_id","subj":"207","obj":"Gene:59272"},{"id":"A208","pred":"tao:has_database_id","subj":"208","obj":"Tax:555479"},{"id":"A209","pred":"tao:has_database_id","subj":"209","obj":"Tax:555479"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"ACE2 was downloaded from PDB database in Maestro v12.3 environment (Schrödinger Release 2020-1: Maestro, Schrödinger, LLC, New York, NY, 2020) and prepared for docking analysis. All the ligands of N. sativa were processed by using LigPrep (Schrödinger Release 2020-1: LigPrep, Schrödinger, LLC, New York, NY, 2020) to generate all the possible stereoisomers. Extra-Precision (XP) docking was performed using Glide (Schrödinger Release 2020-1: Glide, Schrödinger, LLC, New York, NY, 2020). Docking analysis was performed to analyse the best binding ligand from N. sativa constituents to ACE2 receptor."}