PMC:7601109 / 43405-45140
Annnotations
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T60 | 116-129 | Body_part | denotes | soleus muscle | http://purl.obolibrary.org/obo/UBERON_0001389 |
T61 | 422-427 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
T62 | 890-903 | Body_part | denotes | soleus muscle | http://purl.obolibrary.org/obo/UBERON_0001389 |
T63 | 993-997 | Body_part | denotes | hand | http://purl.obolibrary.org/obo/UBERON_0002398 |
T64 | 1057-1070 | Body_part | denotes | soleus muscle | http://purl.obolibrary.org/obo/UBERON_0001389 |
T65 | 1180-1189 | Body_part | denotes | plantaris | http://purl.obolibrary.org/obo/UBERON_0011905 |
T66 | 1194-1211 | Body_part | denotes | tibialis anterior | http://purl.obolibrary.org/obo/UBERON_0001385 |
T67 | 1194-1202 | Body_part | denotes | tibialis | http://purl.obolibrary.org/obo/UBERON_0008230 |
T68 | 1463-1476 | Body_part | denotes | soleus muscle | http://purl.obolibrary.org/obo/UBERON_0001389 |
T69 | 1554-1567 | Body_part | denotes | soleus muscle | http://purl.obolibrary.org/obo/UBERON_0001389 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T287 | 116-129 | Body_part | denotes | soleus muscle | http://purl.org/sig/ont/fma/fma22542 |
T288 | 202-209 | Body_part | denotes | glucose | http://purl.org/sig/ont/fma/fma82743 |
T289 | 229-235 | Body_part | denotes | muscle | http://purl.org/sig/ont/fma/fma32558 |
T290 | 343-353 | Body_part | denotes | calmodulin | http://purl.org/sig/ont/fma/fma62343 |
T291 | 422-427 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
T292 | 512-527 | Body_part | denotes | plasma membrane | http://purl.org/sig/ont/fma/fma63841 |
T293 | 654-660 | Body_part | denotes | muscle | http://purl.org/sig/ont/fma/fma32558 |
T294 | 780-782 | Body_part | denotes | CS | http://purl.org/sig/ont/fma/fma284995 |
T295 | 871-882 | Body_part | denotes | fatty acids | http://purl.org/sig/ont/fma/fma82738 |
T296 | 890-903 | Body_part | denotes | soleus muscle | http://purl.org/sig/ont/fma/fma22542 |
T297 | 993-997 | Body_part | denotes | hand | http://purl.org/sig/ont/fma/fma9712 |
T298 | 1057-1070 | Body_part | denotes | soleus muscle | http://purl.org/sig/ont/fma/fma22542 |
T299 | 1160-1162 | Body_part | denotes | CS | http://purl.org/sig/ont/fma/fma284995 |
T300 | 1180-1189 | Body_part | denotes | plantaris | http://purl.org/sig/ont/fma/fma22543 |
T301 | 1194-1211 | Body_part | denotes | tibialis anterior | http://purl.org/sig/ont/fma/fma22532 |
T302 | 1212-1219 | Body_part | denotes | muscles | http://purl.org/sig/ont/fma/fma32558 |
T303 | 1374-1381 | Body_part | denotes | muscles | http://purl.org/sig/ont/fma/fma32558 |
T304 | 1463-1476 | Body_part | denotes | soleus muscle | http://purl.org/sig/ont/fma/fma22542 |
T305 | 1554-1567 | Body_part | denotes | soleus muscle | http://purl.org/sig/ont/fma/fma22542 |
T306 | 1594-1601 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T591 | 123-129 | http://purl.obolibrary.org/obo/UBERON_0001630 | denotes | muscle |
T592 | 123-129 | http://purl.obolibrary.org/obo/UBERON_0005090 | denotes | muscle |
T593 | 123-129 | http://www.ebi.ac.uk/efo/EFO_0000801 | denotes | muscle |
T594 | 123-129 | http://www.ebi.ac.uk/efo/EFO_0001949 | denotes | muscle |
T595 | 220-235 | http://purl.obolibrary.org/obo/UBERON_0001134 | denotes | skeletal muscle |
T596 | 220-235 | http://purl.obolibrary.org/obo/UBERON_0014892 | denotes | skeletal muscle |
T597 | 220-235 | http://www.ebi.ac.uk/efo/EFO_0000888 | denotes | skeletal muscle |
T598 | 422-427 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
T599 | 422-427 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
T600 | 447-457 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | Activation |
T601 | 512-518 | http://purl.obolibrary.org/obo/UBERON_0001969 | denotes | plasma |
T602 | 519-527 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
T603 | 531-533 | http://purl.obolibrary.org/obo/CLO_0007203 | denotes | L6 |
T604 | 534-542 | http://purl.obolibrary.org/obo/CL_0002372 | denotes | myotubes |
T605 | 654-660 | http://purl.obolibrary.org/obo/UBERON_0001630 | denotes | muscle |
T606 | 654-660 | http://purl.obolibrary.org/obo/UBERON_0005090 | denotes | muscle |
T607 | 654-660 | http://www.ebi.ac.uk/efo/EFO_0000801 | denotes | muscle |
T608 | 654-660 | http://www.ebi.ac.uk/efo/EFO_0001949 | denotes | muscle |
T609 | 766-776 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activities |
T610 | 897-903 | http://purl.obolibrary.org/obo/UBERON_0001630 | denotes | muscle |
T611 | 897-903 | http://purl.obolibrary.org/obo/UBERON_0005090 | denotes | muscle |
T612 | 897-903 | http://www.ebi.ac.uk/efo/EFO_0000801 | denotes | muscle |
T613 | 897-903 | http://www.ebi.ac.uk/efo/EFO_0001949 | denotes | muscle |
T614 | 942-944 | http://purl.obolibrary.org/obo/CLO_0001000 | denotes | 35 |
T615 | 945-947 | http://purl.obolibrary.org/obo/CLO_0053799 | denotes | 45 |
T616 | 971-973 | http://purl.obolibrary.org/obo/CLO_0001000 | denotes | 35 |
T617 | 1024-1032 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activity |
T618 | 1064-1070 | http://purl.obolibrary.org/obo/UBERON_0001630 | denotes | muscle |
T619 | 1064-1070 | http://purl.obolibrary.org/obo/UBERON_0005090 | denotes | muscle |
T620 | 1064-1070 | http://www.ebi.ac.uk/efo/EFO_0000801 | denotes | muscle |
T621 | 1064-1070 | http://www.ebi.ac.uk/efo/EFO_0001949 | denotes | muscle |
T622 | 1148-1156 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activity |
T623 | 1212-1219 | http://www.ebi.ac.uk/efo/EFO_0000801 | denotes | muscles |
T624 | 1257-1258 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T625 | 1374-1381 | http://www.ebi.ac.uk/efo/EFO_0000801 | denotes | muscles |
T626 | 1470-1476 | http://purl.obolibrary.org/obo/UBERON_0001630 | denotes | muscle |
T627 | 1470-1476 | http://purl.obolibrary.org/obo/UBERON_0005090 | denotes | muscle |
T628 | 1470-1476 | http://www.ebi.ac.uk/efo/EFO_0000801 | denotes | muscle |
T629 | 1470-1476 | http://www.ebi.ac.uk/efo/EFO_0001949 | denotes | muscle |
T630 | 1487-1488 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T631 | 1561-1567 | http://purl.obolibrary.org/obo/UBERON_0001630 | denotes | muscle |
T632 | 1561-1567 | http://purl.obolibrary.org/obo/UBERON_0005090 | denotes | muscle |
T633 | 1561-1567 | http://www.ebi.ac.uk/efo/EFO_0000801 | denotes | muscle |
T634 | 1561-1567 | http://www.ebi.ac.uk/efo/EFO_0001949 | denotes | muscle |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T640 | 53-64 | Chemical | denotes | royal jelly | http://purl.obolibrary.org/obo/CHEBI_78665 |
T641 | 72-75 | Chemical | denotes | HDA | http://purl.obolibrary.org/obo/CHEBI_17314 |
T642 | 202-209 | Chemical | denotes | glucose | http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167 |
T644 | 338-340 | Chemical | denotes | Ca | http://purl.obolibrary.org/obo/CHEBI_22984 |
T645 | 584-595 | Chemical | denotes | royal jelly | http://purl.obolibrary.org/obo/CHEBI_78665 |
T646 | 719-730 | Chemical | denotes | royal jelly | http://purl.obolibrary.org/obo/CHEBI_78665 |
T647 | 780-782 | Chemical | denotes | CS | http://purl.obolibrary.org/obo/CHEBI_73462 |
T648 | 860-882 | Chemical | denotes | long-chain fatty acids | http://purl.obolibrary.org/obo/CHEBI_15904 |
T649 | 871-882 | Chemical | denotes | fatty acids | http://purl.obolibrary.org/obo/CHEBI_35366 |
T650 | 877-882 | Chemical | denotes | acids | http://purl.obolibrary.org/obo/CHEBI_37527 |
T651 | 999-1010 | Chemical | denotes | royal jelly | http://purl.obolibrary.org/obo/CHEBI_78665 |
T652 | 1160-1162 | Chemical | denotes | CS | http://purl.obolibrary.org/obo/CHEBI_73462 |
T653 | 1243-1245 | Chemical | denotes | II | http://purl.obolibrary.org/obo/CHEBI_74067 |
T654 | 1327-1338 | Chemical | denotes | royal jelly | http://purl.obolibrary.org/obo/CHEBI_78665 |
T655 | 1444-1455 | Chemical | denotes | royal jelly | http://purl.obolibrary.org/obo/CHEBI_78665 |
T656 | 1594-1601 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T657 | 1713-1721 | Chemical | denotes | nutrient | http://purl.obolibrary.org/obo/CHEBI_33284 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T149 | 202-216 | http://purl.obolibrary.org/obo/GO_0046323 | denotes | glucose uptake |
T150 | 210-216 | http://purl.obolibrary.org/obo/GO_0098739 | denotes | uptake |
T151 | 210-216 | http://purl.obolibrary.org/obo/GO_0098657 | denotes | uptake |
T152 | 252-267 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
T153 | 271-275 | http://purl.obolibrary.org/obo/GO_0050405 | denotes | AMPK |
T154 | 271-275 | http://purl.obolibrary.org/obo/GO_0047322 | denotes | AMPK |
T155 | 271-275 | http://purl.obolibrary.org/obo/GO_0004691 | denotes | AMPK |
T156 | 461-465 | http://purl.obolibrary.org/obo/GO_0050405 | denotes | AMPK |
T157 | 461-465 | http://purl.obolibrary.org/obo/GO_0047322 | denotes | AMPK |
T158 | 461-465 | http://purl.obolibrary.org/obo/GO_0004691 | denotes | AMPK |
T159 | 1623-1634 | http://purl.obolibrary.org/obo/GO_0009056 | denotes | degradation |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T267 | 0-171 | Sentence | denotes | Japanese researchers proved that oral consumption of royal jelly and 10-HDA induced mitochondrial adaptation in the soleus muscle when accompanied with endurance training. |
T268 | 172-446 | Sentence | denotes | These compounds also enhanced glucose uptake in skeletal muscle by inducing the phosphorylation of AMPK [106,112], an effect that was mediated by the upstream kinase Ca²⁺/calmodulin-dependent kinaseβ—independently of changes in AMP:ATP ratio and the liver kinase B1 pathway. |
T269 | 447-549 | Sentence | denotes | Activation of AMPK was followed by translocation of GLUT4 to the plasma membrane of L6 myotubes [106]. |
T270 | 550-670 | Sentence | denotes | It is note-worthy that effects of royal jelly on mitochondrial biogenesis under endurance training were muscle-specific. |
T271 | 671-979 | Sentence | denotes | In this respect, neither endurance training nor royal jelly alone had an effect on the maximal activities of CS and β-HAD—the enzyme that catalyzes the rate-limiting step of β-oxidation of long-chain fatty acids—in the soleus muscle, which comprises type I fiber (around 35–45%) and type IIa (around 35–50%). |
T272 | 980-1101 | Sentence | denotes | On the other hand, royal jelly enhanced the activity of these enzymes in the soleus muscle of mice on endurance training. |
T273 | 1102-1406 | Sentence | denotes | Of interest, endurance training increased the activity of CS and β-HAD in the plantaris and tibialis anterior muscles (which are mainly type II fiber with a total percentage of type IIb and type IIx fiber types of 90%) while royal jelly failed to exert an effect on these muscles in sedentary mice [106]. |
T274 | 1407-1495 | Sentence | denotes | Nonetheless, the observed effects of royal jelly in the soleus muscle represent a merit. |
T275 | 1496-1735 | Sentence | denotes | This is mainly because the oxidative type I fibers (e.g., soleus muscle) naturally undergo higher protein turnover (especially degradation), which makes them unable to grow in size or respond properly to insufficient nutrient intake [130]. |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
1025 | 271-275 | Gene | denotes | AMPK | Gene:78975 |
1026 | 461-465 | Gene | denotes | AMPK | Gene:78975 |
1027 | 499-504 | Gene | denotes | GLUT4 | Gene:25139 |
1028 | 780-782 | Gene | denotes | CS | Gene:170587 |
1029 | 1074-1078 | Species | denotes | mice | Tax:10090 |
1030 | 1395-1399 | Species | denotes | mice | Tax:10090 |
1031 | 53-64 | Chemical | denotes | royal jelly | MESH:C058787 |
1032 | 69-75 | Chemical | denotes | 10-HDA | |
1033 | 202-209 | Chemical | denotes | glucose | MESH:D005947 |
1034 | 400-403 | Chemical | denotes | AMP | MESH:D000249 |
1035 | 404-407 | Chemical | denotes | ATP | MESH:D000255 |
1036 | 719-730 | Chemical | denotes | royal jelly | MESH:C058787 |
1037 | 860-882 | Chemical | denotes | long-chain fatty acids | |
1038 | 999-1010 | Chemical | denotes | royal jelly | MESH:C058787 |
1039 | 1327-1338 | Chemical | denotes | royal jelly | MESH:C058787 |