> top > docs > PMC:7597510 > spans > 2806-4411 > annotations

PMC:7597510 / 2806-4411 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T7 131-142 Body_part denotes extremities http://purl.org/sig/ont/fma/fma7182
T8 355-360 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T9 809-826 Body_part denotes lower extremities http://purl.org/sig/ont/fma/fma7184
T10 857-874 Body_part denotes upper extremities http://purl.org/sig/ont/fma/fma7183
T11 935-946 Body_part denotes extremities http://purl.org/sig/ont/fma/fma7182
T12 1029-1051 Body_part denotes central nervous system http://purl.org/sig/ont/fma/fma55675
T13 1053-1059 Body_part denotes Tendon http://purl.org/sig/ont/fma/fma9721
T14 1076-1093 Body_part denotes upper extremities http://purl.org/sig/ont/fma/fma7183
T15 1140-1157 Body_part denotes lower extremities http://purl.org/sig/ont/fma/fma7184
T16 1204-1210 Body_part denotes muscle http://purl.org/sig/ont/fma/fma32558
T17 1260-1267 Body_part denotes muscles http://purl.org/sig/ont/fma/fma32558
T18 1275-1292 Body_part denotes lower extremities http://purl.org/sig/ont/fma/fma7184
T19 1334-1341 Body_part denotes muscles http://purl.org/sig/ont/fma/fma32558
T20 1349-1366 Body_part denotes upper extremities http://purl.org/sig/ont/fma/fma7183
T21 1544-1555 Body_part denotes extremities http://purl.org/sig/ont/fma/fma7182

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T2 355-360 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T3 1029-1051 Body_part denotes central nervous system http://purl.obolibrary.org/obo/UBERON_0001017
T4 1037-1051 Body_part denotes nervous system http://purl.obolibrary.org/obo/UBERON_0001016
T5 1053-1059 Body_part denotes Tendon http://purl.obolibrary.org/obo/UBERON_0000043
T6 1188-1193 Body_part denotes Scale http://purl.obolibrary.org/obo/UBERON_0002542

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T52 38-44 Disease denotes asthma http://purl.obolibrary.org/obo/MONDO_0004979
T53 303-311 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T54 332-341 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T55 559-565 Disease denotes asthma http://purl.obolibrary.org/obo/MONDO_0004979
T56 665-671 Disease denotes asthma http://purl.obolibrary.org/obo/MONDO_0004979
T57 1411-1414 Disease denotes GBS http://purl.obolibrary.org/obo/MONDO_0016218
T58 1598-1604 Disease denotes ataxia http://purl.obolibrary.org/obo/MONDO_0000437

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T10 0-4 http://purl.obolibrary.org/obo/CLO_0001599 denotes A 54
T11 25-26 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T12 131-142 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremities
T13 272-276 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T14 355-360 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T15 815-826 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremities
T16 863-874 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremities
T17 935-946 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremities
T18 1029-1051 http://purl.obolibrary.org/obo/UBERON_0001017 denotes central nervous system
T19 1029-1051 http://www.ebi.ac.uk/efo/EFO_0000302 denotes central nervous system
T20 1029-1051 http://www.ebi.ac.uk/efo/EFO_0000908 denotes central nervous system
T21 1053-1059 http://www.ebi.ac.uk/cellline#tendon denotes Tendon
T22 1053-1059 http://www.ebi.ac.uk/efo/EFO_0000952 denotes Tendon
T23 1082-1093 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremities
T24 1146-1157 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremities
T25 1204-1210 http://purl.obolibrary.org/obo/UBERON_0001630 denotes muscle
T26 1204-1210 http://purl.obolibrary.org/obo/UBERON_0005090 denotes muscle
T27 1204-1210 http://www.ebi.ac.uk/efo/EFO_0000801 denotes muscle
T28 1204-1210 http://www.ebi.ac.uk/efo/EFO_0001949 denotes muscle
T29 1260-1274 http://purl.obolibrary.org/obo/UBERON_0001630 denotes muscles of the
T30 1260-1274 http://purl.obolibrary.org/obo/UBERON_0005090 denotes muscles of the
T31 1260-1274 http://www.ebi.ac.uk/efo/EFO_0001949 denotes muscles of the
T32 1260-1267 http://www.ebi.ac.uk/efo/EFO_0000801 denotes muscles
T33 1281-1292 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremities
T34 1334-1348 http://purl.obolibrary.org/obo/UBERON_0001630 denotes muscles of the
T35 1334-1348 http://purl.obolibrary.org/obo/UBERON_0005090 denotes muscles of the
T36 1334-1348 http://www.ebi.ac.uk/efo/EFO_0001949 denotes muscles of the
T37 1334-1341 http://www.ebi.ac.uk/efo/EFO_0000801 denotes muscles
T38 1355-1366 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremities
T39 1544-1555 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremities

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T10 362-368 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T11 454-464 Chemical denotes budesonide http://purl.obolibrary.org/obo/CHEBI_3207
T12 466-485 Chemical denotes formoterol fumarate http://purl.obolibrary.org/obo/CHEBI_31633
T13 466-476 Chemical denotes formoterol http://purl.obolibrary.org/obo/CHEBI_5147
T14 477-485 Chemical denotes fumarate http://purl.obolibrary.org/obo/CHEBI_29806
T15 486-493 Chemical denotes hydrate http://purl.obolibrary.org/obo/CHEBI_35505
T16 498-516 Chemical denotes montelukast sodium http://purl.obolibrary.org/obo/CHEBI_6993
T17 498-509 Chemical denotes montelukast http://purl.obolibrary.org/obo/CHEBI_50730
T18 510-516 Chemical denotes sodium http://purl.obolibrary.org/obo/CHEBI_26708
T19 588-601 Chemical denotes betamethasone http://purl.obolibrary.org/obo/CHEBI_3077

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
89 1306-1322 Gene denotes proximal and 4/4
90 1232-1248 Gene denotes proximal and 5/5
91 1587-1590 Gene denotes she Gene:126669
92 1368-1371 Gene denotes she Gene:126669
93 898-901 Gene denotes she Gene:126669
94 769-772 Gene denotes she Gene:126669
95 324-327 Gene denotes she Gene:126669
96 201-204 Gene denotes she Gene:126669
97 14-19 Species denotes woman Tax:9606
98 303-313 Species denotes SARS-CoV-2 Tax:2697049
99 362-368 Chemical denotes oxygen MESH:D010100
100 454-464 Chemical denotes budesonide MESH:D019819
101 466-493 Chemical denotes formoterol fumarate hydrate MESH:D000068759
102 498-516 Chemical denotes montelukast sodium MESH:C093875
103 588-601 Chemical denotes betamethasone MESH:D001623
104 38-44 Disease denotes asthma MESH:D001249
105 102-110 Disease denotes numbness MESH:D006987
106 115-123 Disease denotes weakness MESH:D018908
107 178-199 Disease denotes neurological symptoms MESH:D009422
108 215-220 Disease denotes cough MESH:D003371
109 225-230 Disease denotes fever MESH:D005334
110 332-341 Disease denotes pneumonia MESH:D011014
111 559-565 Disease denotes asthma MESH:D001249
112 665-671 Disease denotes asthma MESH:D001249
113 793-801 Disease denotes numbness MESH:D006987
114 919-927 Disease denotes weakness MESH:D018908
115 1598-1604 Disease denotes ataxia MESH:D001259

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T6 38-44 Phenotype denotes asthma http://purl.obolibrary.org/obo/HP_0002099
T7 215-220 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T8 225-230 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T9 332-341 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T10 559-565 Phenotype denotes asthma http://purl.obolibrary.org/obo/HP_0002099
T11 665-671 Phenotype denotes asthma http://purl.obolibrary.org/obo/HP_0002099
T12 1008-1051 Phenotype denotes abnormalities in the central nervous system http://purl.obolibrary.org/obo/HP_0002011
T13 1598-1604 Phenotype denotes ataxia http://purl.obolibrary.org/obo/HP_0001251

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 254-267 http://purl.obolibrary.org/obo/GO_0003968 denotes transcriptase
T2 254-267 http://purl.obolibrary.org/obo/GO_0003899 denotes transcriptase

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T19 0-143 Sentence denotes A 54-year-old woman with a history of asthma was admitted to our hospital in May 2020 with reports of numbness and weakness in her extremities.
T20 144-314 Sentence denotes Twenty days prior to the onset of neurological symptoms, she developed cough and fever; oropharyngeal reverse transcriptase PCR test results were positive for SARS-CoV-2.
T21 315-384 Sentence denotes Although she had pneumonia on CT of the chest, oxygen was not needed.
T22 385-566 Sentence denotes Therefore, we did not administer additional treatment, and continued budesonide, formoterol fumarate hydrate and montelukast sodium, that were originally being used to treat asthma.
T23 567-672 Sentence denotes In addition, we used betamethasone only for the first 2 days to avoid the risk of exacerbation of asthma.
T24 673-745 Sentence denotes Following approximately 2 weeks of treatment, PCR results were negative.
T25 746-875 Sentence denotes However, at that time, she began to experience numbness in the lower extremities, that gradually spread to the upper extremities.
T26 876-947 Sentence denotes Within the next week, she began to develop weakness in the extremities.
T27 948-1052 Sentence denotes Neurological examination revealed no findings suggestive of abnormalities in the central nervous system.
T28 1053-1158 Sentence denotes Tendon reflexes in the upper extremities were normal, although they were absent in the lower extremities.
T29 1159-1389 Sentence denotes The Medical Research Council Scale grade for muscle strength was 4/4 for proximal and 5/5 for distal muscles of the lower extremities, and 4/4 for proximal and 4/4 for distal muscles of the upper extremities; she was able to walk.
T30 1390-1487 Sentence denotes Her modified Erasmus GBS Outcome Score (mEGOS) was 3/9, while her Hughes’ functional grade was 2.
T31 1488-1605 Sentence denotes Superficial sensation was mildly impaired in the distal extremities, deep sensation was normal and she had no ataxia.