PMC:7589163 / 23861-24676
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T159 | 27-34 | Body_part | denotes | hormone | http://purl.org/sig/ont/fma/fma12278 |
T160 | 69-73 | Body_part | denotes | skin | http://purl.org/sig/ont/fma/fma7163 |
T161 | 391-395 | Body_part | denotes | skin | http://purl.org/sig/ont/fma/fma7163 |
T162 | 420-442 | Body_part | denotes | gastrointestinal tract | http://purl.org/sig/ont/fma/fma71132 |
T163 | 469-474 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
T164 | 496-503 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T165 | 519-524 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
T166 | 719-726 | Body_part | denotes | kidneys | http://purl.org/sig/ont/fma/fma7203 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T55 | 69-73 | Body_part | denotes | skin | http://purl.obolibrary.org/obo/UBERON_0000014 |
T56 | 305-314 | Body_part | denotes | egg yolks | http://purl.obolibrary.org/obo/UBERON_0007378 |
T57 | 305-308 | Body_part | denotes | egg | http://purl.obolibrary.org/obo/UBERON_0007379 |
T58 | 391-395 | Body_part | denotes | skin | http://purl.obolibrary.org/obo/UBERON_0000014 |
T59 | 469-474 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
T60 | 519-524 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T273 | 13-14 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T274 | 15-18 | http://purl.obolibrary.org/obo/UBERON_0001013 | denotes | fat |
T275 | 69-73 | http://purl.obolibrary.org/obo/UBERON_0000014 | denotes | skin |
T276 | 69-73 | http://purl.obolibrary.org/obo/UBERON_0001003 | denotes | skin |
T277 | 69-73 | http://purl.obolibrary.org/obo/UBERON_0002097 | denotes | skin |
T278 | 69-73 | http://purl.obolibrary.org/obo/UBERON_0002199 | denotes | skin |
T279 | 69-73 | http://www.ebi.ac.uk/efo/EFO_0000962 | denotes | skin |
T280 | 147-149 | http://purl.obolibrary.org/obo/CLO_0002675 | denotes | D3 |
T281 | 160-161 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T282 | 238-240 | http://purl.obolibrary.org/obo/CLO_0002668 | denotes | D2 |
T283 | 244-246 | http://purl.obolibrary.org/obo/CLO_0002675 | denotes | D3 |
T284 | 288-292 | http://purl.obolibrary.org/obo/NCBITaxon_117565 | denotes | fish |
T285 | 294-298 | http://purl.obolibrary.org/obo/NCBITaxon_117565 | denotes | fish |
T286 | 391-395 | http://purl.obolibrary.org/obo/UBERON_0000014 | denotes | skin |
T287 | 391-395 | http://purl.obolibrary.org/obo/UBERON_0001003 | denotes | skin |
T288 | 391-395 | http://purl.obolibrary.org/obo/UBERON_0002097 | denotes | skin |
T289 | 391-395 | http://purl.obolibrary.org/obo/UBERON_0002199 | denotes | skin |
T290 | 391-395 | http://www.ebi.ac.uk/efo/EFO_0000962 | denotes | skin |
T291 | 420-442 | http://purl.obolibrary.org/obo/UBERON_0005409 | denotes | gastrointestinal tract |
T292 | 469-474 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
T293 | 469-474 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
T294 | 519-524 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
T295 | 519-524 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
T296 | 719-726 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidneys |
T297 | 719-726 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidneys |
T298 | 719-726 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidneys |
T299 | 765-771 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | active |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T382 | 0-9 | Chemical | denotes | Vitamin D | http://purl.obolibrary.org/obo/CHEBI_89324 |
T383 | 0-7 | Chemical | denotes | Vitamin | http://purl.obolibrary.org/obo/CHEBI_33229 |
T384 | 27-34 | Chemical | denotes | hormone | http://purl.obolibrary.org/obo/CHEBI_24621 |
T385 | 139-149 | Chemical | denotes | vitamin D3 | http://purl.obolibrary.org/obo/CHEBI_28940 |
T386 | 139-146 | Chemical | denotes | vitamin | http://purl.obolibrary.org/obo/CHEBI_33229 |
T387 | 230-240 | Chemical | denotes | vitamin D2 | http://purl.obolibrary.org/obo/CHEBI_28934 |
T388 | 230-237 | Chemical | denotes | vitamin | http://purl.obolibrary.org/obo/CHEBI_33229 |
T389 | 238-240 | Chemical | denotes | D2 | http://purl.obolibrary.org/obo/CHEBI_29294 |
T390 | 268-277 | Chemical | denotes | vitamin D | http://purl.obolibrary.org/obo/CHEBI_27300 |
T391 | 268-275 | Chemical | denotes | vitamin | http://purl.obolibrary.org/obo/CHEBI_33229 |
T392 | 328-337 | Chemical | denotes | vitamin D | http://purl.obolibrary.org/obo/CHEBI_27300 |
T393 | 328-335 | Chemical | denotes | vitamin | http://purl.obolibrary.org/obo/CHEBI_33229 |
T394 | 362-371 | Chemical | denotes | vitamin D | http://purl.obolibrary.org/obo/CHEBI_27300 |
T395 | 362-369 | Chemical | denotes | vitamin | http://purl.obolibrary.org/obo/CHEBI_33229 |
T396 | 478-487 | Chemical | denotes | vitamin D | http://purl.obolibrary.org/obo/CHEBI_27300 |
T397 | 478-485 | Chemical | denotes | vitamin | http://purl.obolibrary.org/obo/CHEBI_33229 |
T398 | 496-503 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T399 | 525-534 | Chemical | denotes | vitamin D | http://purl.obolibrary.org/obo/CHEBI_27300 |
T400 | 525-532 | Chemical | denotes | vitamin | http://purl.obolibrary.org/obo/CHEBI_33229 |
T401 | 554-561 | Chemical | denotes | hydroxy | http://purl.obolibrary.org/obo/CHEBI_43176 |
T402 | 562-571 | Chemical | denotes | vitamin D | http://purl.obolibrary.org/obo/CHEBI_27300 |
T403 | 562-569 | Chemical | denotes | vitamin | http://purl.obolibrary.org/obo/CHEBI_33229 |
T404 | 614-623 | Chemical | denotes | vitamin D | http://purl.obolibrary.org/obo/CHEBI_27300 |
T405 | 614-621 | Chemical | denotes | vitamin | http://purl.obolibrary.org/obo/CHEBI_33229 |
T406 | 679-686 | Chemical | denotes | hydroxy | http://purl.obolibrary.org/obo/CHEBI_43176 |
T407 | 687-696 | Chemical | denotes | vitamin D | http://purl.obolibrary.org/obo/CHEBI_27300 |
T408 | 687-694 | Chemical | denotes | vitamin | http://purl.obolibrary.org/obo/CHEBI_33229 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T85 | 450-461 | http://purl.obolibrary.org/obo/GO_0006810 | denotes | transported |
T86 | 700-711 | http://purl.obolibrary.org/obo/GO_0006810 | denotes | transported |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T166 | 0-355 | Sentence | denotes | Vitamin D is a fat-soluble hormone that is mainly synthesized in the skin after exposure to ultraviolet rays from sunlight (in the form of vitamin D3), and, to a lesser extent, is derived from dietary intake in the form of either vitamin D2 or D3 (the main sources of vitamin D are fatty fish, fish oils, egg yolks, cheese, and vitamin D-fortified foods). |
T167 | 356-511 | Sentence | denotes | After vitamin D is produced in the skin or absorbed through the gastrointestinal tract, it is transported to the liver by vitamin D-binding protein (VDBP). |
T168 | 512-669 | Sentence | denotes | In the liver vitamin D is converted to 25 hydroxy vitamin D (25(OH)D), which is monitored to evaluate vitamin D status because of its half-life of 2–3 weeks. |
T169 | 670-815 | Sentence | denotes | Next, 25 hydroxy vitamin D is transported to the kidneys, where it is finally converted to its active form, 1,25 dihydroxyvitamin D (1,25(OH)2D). |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
628 | 478-503 | Gene | denotes | vitamin D-binding protein | Gene:2638 |
629 | 505-509 | Gene | denotes | VDBP | Gene:2638 |
630 | 0-9 | Chemical | denotes | Vitamin D | MESH:D014807 |
631 | 139-149 | Chemical | denotes | vitamin D3 | MESH:D002762 |
632 | 230-240 | Chemical | denotes | vitamin D2 | MESH:D004872 |
633 | 244-246 | Chemical | denotes | D3 | MESH:D002762 |
634 | 268-277 | Chemical | denotes | vitamin D | MESH:D014807 |
635 | 328-337 | Chemical | denotes | vitamin D | MESH:D014807 |
636 | 362-371 | Chemical | denotes | vitamin D | MESH:D014807 |
637 | 525-534 | Chemical | denotes | vitamin D | MESH:D014807 |
638 | 551-571 | Chemical | denotes | 25 hydroxy vitamin D | MESH:C104450 |
639 | 573-580 | Chemical | denotes | 25(OH)D | |
640 | 614-623 | Chemical | denotes | vitamin D | MESH:D014807 |
641 | 676-696 | Chemical | denotes | 25 hydroxy vitamin D | MESH:C104450 |
642 | 778-801 | Chemical | denotes | 1,25 dihydroxyvitamin D | MESH:C097949 |
643 | 803-813 | Chemical | denotes | 1,25(OH)2D |