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PMC:7589163 / 23861-24676 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T159 27-34 Body_part denotes hormone http://purl.org/sig/ont/fma/fma12278
T160 69-73 Body_part denotes skin http://purl.org/sig/ont/fma/fma7163
T161 391-395 Body_part denotes skin http://purl.org/sig/ont/fma/fma7163
T162 420-442 Body_part denotes gastrointestinal tract http://purl.org/sig/ont/fma/fma71132
T163 469-474 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T164 496-503 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T165 519-524 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T166 719-726 Body_part denotes kidneys http://purl.org/sig/ont/fma/fma7203

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T55 69-73 Body_part denotes skin http://purl.obolibrary.org/obo/UBERON_0000014
T56 305-314 Body_part denotes egg yolks http://purl.obolibrary.org/obo/UBERON_0007378
T57 305-308 Body_part denotes egg http://purl.obolibrary.org/obo/UBERON_0007379
T58 391-395 Body_part denotes skin http://purl.obolibrary.org/obo/UBERON_0000014
T59 469-474 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T60 519-524 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T273 13-14 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T274 15-18 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fat
T275 69-73 http://purl.obolibrary.org/obo/UBERON_0000014 denotes skin
T276 69-73 http://purl.obolibrary.org/obo/UBERON_0001003 denotes skin
T277 69-73 http://purl.obolibrary.org/obo/UBERON_0002097 denotes skin
T278 69-73 http://purl.obolibrary.org/obo/UBERON_0002199 denotes skin
T279 69-73 http://www.ebi.ac.uk/efo/EFO_0000962 denotes skin
T280 147-149 http://purl.obolibrary.org/obo/CLO_0002675 denotes D3
T281 160-161 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T282 238-240 http://purl.obolibrary.org/obo/CLO_0002668 denotes D2
T283 244-246 http://purl.obolibrary.org/obo/CLO_0002675 denotes D3
T284 288-292 http://purl.obolibrary.org/obo/NCBITaxon_117565 denotes fish
T285 294-298 http://purl.obolibrary.org/obo/NCBITaxon_117565 denotes fish
T286 391-395 http://purl.obolibrary.org/obo/UBERON_0000014 denotes skin
T287 391-395 http://purl.obolibrary.org/obo/UBERON_0001003 denotes skin
T288 391-395 http://purl.obolibrary.org/obo/UBERON_0002097 denotes skin
T289 391-395 http://purl.obolibrary.org/obo/UBERON_0002199 denotes skin
T290 391-395 http://www.ebi.ac.uk/efo/EFO_0000962 denotes skin
T291 420-442 http://purl.obolibrary.org/obo/UBERON_0005409 denotes gastrointestinal tract
T292 469-474 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T293 469-474 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T294 519-524 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T295 519-524 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T296 719-726 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidneys
T297 719-726 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidneys
T298 719-726 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidneys
T299 765-771 http://purl.obolibrary.org/obo/CLO_0001658 denotes active

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T382 0-9 Chemical denotes Vitamin D http://purl.obolibrary.org/obo/CHEBI_89324
T383 0-7 Chemical denotes Vitamin http://purl.obolibrary.org/obo/CHEBI_33229
T384 27-34 Chemical denotes hormone http://purl.obolibrary.org/obo/CHEBI_24621
T385 139-149 Chemical denotes vitamin D3 http://purl.obolibrary.org/obo/CHEBI_28940
T386 139-146 Chemical denotes vitamin http://purl.obolibrary.org/obo/CHEBI_33229
T387 230-240 Chemical denotes vitamin D2 http://purl.obolibrary.org/obo/CHEBI_28934
T388 230-237 Chemical denotes vitamin http://purl.obolibrary.org/obo/CHEBI_33229
T389 238-240 Chemical denotes D2 http://purl.obolibrary.org/obo/CHEBI_29294
T390 268-277 Chemical denotes vitamin D http://purl.obolibrary.org/obo/CHEBI_27300
T391 268-275 Chemical denotes vitamin http://purl.obolibrary.org/obo/CHEBI_33229
T392 328-337 Chemical denotes vitamin D http://purl.obolibrary.org/obo/CHEBI_27300
T393 328-335 Chemical denotes vitamin http://purl.obolibrary.org/obo/CHEBI_33229
T394 362-371 Chemical denotes vitamin D http://purl.obolibrary.org/obo/CHEBI_27300
T395 362-369 Chemical denotes vitamin http://purl.obolibrary.org/obo/CHEBI_33229
T396 478-487 Chemical denotes vitamin D http://purl.obolibrary.org/obo/CHEBI_27300
T397 478-485 Chemical denotes vitamin http://purl.obolibrary.org/obo/CHEBI_33229
T398 496-503 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T399 525-534 Chemical denotes vitamin D http://purl.obolibrary.org/obo/CHEBI_27300
T400 525-532 Chemical denotes vitamin http://purl.obolibrary.org/obo/CHEBI_33229
T401 554-561 Chemical denotes hydroxy http://purl.obolibrary.org/obo/CHEBI_43176
T402 562-571 Chemical denotes vitamin D http://purl.obolibrary.org/obo/CHEBI_27300
T403 562-569 Chemical denotes vitamin http://purl.obolibrary.org/obo/CHEBI_33229
T404 614-623 Chemical denotes vitamin D http://purl.obolibrary.org/obo/CHEBI_27300
T405 614-621 Chemical denotes vitamin http://purl.obolibrary.org/obo/CHEBI_33229
T406 679-686 Chemical denotes hydroxy http://purl.obolibrary.org/obo/CHEBI_43176
T407 687-696 Chemical denotes vitamin D http://purl.obolibrary.org/obo/CHEBI_27300
T408 687-694 Chemical denotes vitamin http://purl.obolibrary.org/obo/CHEBI_33229

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T85 450-461 http://purl.obolibrary.org/obo/GO_0006810 denotes transported
T86 700-711 http://purl.obolibrary.org/obo/GO_0006810 denotes transported

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T166 0-355 Sentence denotes Vitamin D is a fat-soluble hormone that is mainly synthesized in the skin after exposure to ultraviolet rays from sunlight (in the form of vitamin D3), and, to a lesser extent, is derived from dietary intake in the form of either vitamin D2 or D3 (the main sources of vitamin D are fatty fish, fish oils, egg yolks, cheese, and vitamin D-fortified foods).
T167 356-511 Sentence denotes After vitamin D is produced in the skin or absorbed through the gastrointestinal tract, it is transported to the liver by vitamin D-binding protein (VDBP).
T168 512-669 Sentence denotes In the liver vitamin D is converted to 25 hydroxy vitamin D (25(OH)D), which is monitored to evaluate vitamin D status because of its half-life of 2–3 weeks.
T169 670-815 Sentence denotes Next, 25 hydroxy vitamin D is transported to the kidneys, where it is finally converted to its active form, 1,25 dihydroxyvitamin D (1,25(OH)2D).

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
628 478-503 Gene denotes vitamin D-binding protein Gene:2638
629 505-509 Gene denotes VDBP Gene:2638
630 0-9 Chemical denotes Vitamin D MESH:D014807
631 139-149 Chemical denotes vitamin D3 MESH:D002762
632 230-240 Chemical denotes vitamin D2 MESH:D004872
633 244-246 Chemical denotes D3 MESH:D002762
634 268-277 Chemical denotes vitamin D MESH:D014807
635 328-337 Chemical denotes vitamin D MESH:D014807
636 362-371 Chemical denotes vitamin D MESH:D014807
637 525-534 Chemical denotes vitamin D MESH:D014807
638 551-571 Chemical denotes 25 hydroxy vitamin D MESH:C104450
639 573-580 Chemical denotes 25(OH)D
640 614-623 Chemical denotes vitamin D MESH:D014807
641 676-696 Chemical denotes 25 hydroxy vitamin D MESH:C104450
642 778-801 Chemical denotes 1,25 dihydroxyvitamin D MESH:C097949
643 803-813 Chemical denotes 1,25(OH)2D