PMC:7574920 / 31279-32104 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7574920","sourcedb":"PMC","sourceid":"7574920","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7574920","text":"(A) The colorimetric readouts (ΔOD) for the direct (left) and hot (right) swab–to–RT-LAMP assays were assessed every 10 min. Heterogeneity is notable at the early time points. ΔOD values at the zero time point were not measured for the hot swab–to–RT-LAMP assay. Also, the 40-min time point was not available for one plate. The kink in some lines at 30 min (right) was due to a transient equipment malfunction. (B) Comparison of two scoring schemes. The readout used in Fig. 5 to score the direct (left) and hot (right) swab–to–RT-LAMP assays, namely, ΔOD at 30 min, is shown on the y axis, and compared to an alternative score, namely, the difference between the ΔOD signals at 30 min and at 10 min after the start of incubation, shown on the x axis. The latter shows better separation between positive and negative samples.","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T124","span":{"begin":585,"end":589},"obj":"Body_part"},{"id":"T125","span":{"begin":746,"end":750},"obj":"Body_part"}],"attributes":[{"id":"A124","pred":"fma_id","subj":"T124","obj":"http://purl.org/sig/ont/fma/fma12520"},{"id":"A125","pred":"fma_id","subj":"T125","obj":"http://purl.org/sig/ont/fma/fma12520"},{"subj":"T124","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T125","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T73","span":{"begin":32,"end":34},"obj":"Disease"},{"id":"T74","span":{"begin":177,"end":179},"obj":"Disease"},{"id":"T75","span":{"begin":553,"end":555},"obj":"Disease"},{"id":"T76","span":{"begin":665,"end":667},"obj":"Disease"}],"attributes":[{"id":"A73","pred":"mondo_id","subj":"T73","obj":"http://purl.obolibrary.org/obo/MONDO_0017178"},{"id":"A74","pred":"mondo_id","subj":"T74","obj":"http://purl.obolibrary.org/obo/MONDO_0017178"},{"id":"A75","pred":"mondo_id","subj":"T75","obj":"http://purl.obolibrary.org/obo/MONDO_0017178"},{"id":"A76","pred":"mondo_id","subj":"T76","obj":"http://purl.obolibrary.org/obo/MONDO_0017178"},{"subj":"T73","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T74","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T75","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T76","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T275","span":{"begin":1,"end":2},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T276","span":{"begin":376,"end":377},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T277","span":{"begin":412,"end":413},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"},{"id":"T278","span":{"begin":668,"end":675},"obj":"http://purl.obolibrary.org/obo/SO_0000418"}],"attributes":[{"subj":"T275","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T276","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T277","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T278","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T190","span":{"begin":82,"end":84},"obj":"http://purl.obolibrary.org/obo/GO_0001171"},{"id":"T191","span":{"begin":248,"end":250},"obj":"http://purl.obolibrary.org/obo/GO_0001171"},{"id":"T192","span":{"begin":528,"end":530},"obj":"http://purl.obolibrary.org/obo/GO_0001171"}],"attributes":[{"subj":"T190","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T191","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T192","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T240","span":{"begin":0,"end":124},"obj":"Sentence"},{"id":"T241","span":{"begin":125,"end":262},"obj":"Sentence"},{"id":"T242","span":{"begin":263,"end":323},"obj":"Sentence"},{"id":"T243","span":{"begin":324,"end":449},"obj":"Sentence"},{"id":"T244","span":{"begin":450,"end":751},"obj":"Sentence"},{"id":"T245","span":{"begin":752,"end":825},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T240","pred":"source","obj":"LitCovid-sentences"},{"subj":"T241","pred":"source","obj":"LitCovid-sentences"},{"subj":"T242","pred":"source","obj":"LitCovid-sentences"},{"subj":"T243","pred":"source","obj":"LitCovid-sentences"},{"subj":"T244","pred":"source","obj":"LitCovid-sentences"},{"subj":"T245","pred":"source","obj":"LitCovid-sentences"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#93ece9","default":true},{"id":"LitCovid-PD-MONDO","color":"#eccf93"},{"id":"LitCovid-PD-CLO","color":"#b593ec"},{"id":"LitCovid-PD-GO-BP","color":"#93ec9b"},{"id":"LitCovid-sentences","color":"#ec93a4"}]}]}}