PMC:7571312 / 398-945
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7571312","sourcedb":"PMC","sourceid":"7571312","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7571312","text":"ping large polyproteins, which are cleaved at specific sites by a 3C-like cysteine protease (3CLpro) in a post-translational processing step that is critical for coronavirus replication. The 3CLpro sequences for CoV-1 and CoV-2 viruses are 100% identical in the catalytic domain that carries out protein cleavage. A research effort that focused on the discovery of reversible and irreversible ketone-based inhibitors of SARS CoV-1 3CLpro employing ligand-protease structures solved by X-ray crystallography led to the identification of 3 and 4. Pr","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T35139","span":{"begin":74,"end":82},"obj":"Body_part"},{"id":"T8747","span":{"begin":296,"end":303},"obj":"Body_part"}],"attributes":[{"id":"A24141","pred":"fma_id","subj":"T35139","obj":"http://purl.org/sig/ont/fma/fma82751"},{"id":"A77659","pred":"fma_id","subj":"T8747","obj":"http://purl.org/sig/ont/fma/fma67257"},{"subj":"T35139","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T8747","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T8","span":{"begin":420,"end":424},"obj":"Disease"}],"attributes":[{"id":"A8","pred":"mondo_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T55568","span":{"begin":64,"end":68},"obj":"http://purl.obolibrary.org/obo/CLO_0053943"},{"id":"T24614","span":{"begin":104,"end":105},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T12954","span":{"begin":228,"end":235},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T9960","span":{"begin":314,"end":315},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T99506","span":{"begin":337,"end":344},"obj":"http://purl.obolibrary.org/obo/CLO_0009985"}],"attributes":[{"subj":"T55568","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T24614","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T12954","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T9960","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T99506","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T2","span":{"begin":74,"end":82},"obj":"Chemical"},{"id":"T3","span":{"begin":296,"end":303},"obj":"Chemical"},{"id":"T4","span":{"begin":393,"end":399},"obj":"Chemical"},{"id":"T5","span":{"begin":406,"end":416},"obj":"Chemical"},{"id":"T6","span":{"begin":448,"end":454},"obj":"Chemical"}],"attributes":[{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_15356"},{"id":"A3","pred":"chebi_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A4","pred":"chebi_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_17087"},{"id":"A5","pred":"chebi_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/CHEBI_35222"},{"id":"A6","pred":"chebi_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/CHEBI_52214"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T30304","span":{"begin":111,"end":124},"obj":"http://purl.obolibrary.org/obo/GO_0006412"}],"attributes":[{"subj":"T30304","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T5","span":{"begin":187,"end":313},"obj":"Sentence"},{"id":"T6","span":{"begin":314,"end":544},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T5","pred":"source","obj":"LitCovid-sentences"},{"subj":"T6","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"22","span":{"begin":162,"end":173},"obj":"Species"},{"id":"23","span":{"begin":212,"end":215},"obj":"Species"},{"id":"24","span":{"begin":222,"end":227},"obj":"Species"},{"id":"25","span":{"begin":420,"end":428},"obj":"Species"},{"id":"27","span":{"begin":393,"end":399},"obj":"Chemical"}],"attributes":[{"id":"A22","pred":"tao:has_database_id","subj":"22","obj":"Tax:11118"},{"id":"A23","pred":"tao:has_database_id","subj":"23","obj":"Tax:11118"},{"id":"A24","pred":"tao:has_database_id","subj":"24","obj":"Tax:2697049"},{"id":"A25","pred":"tao:has_database_id","subj":"25","obj":"Tax:694009"},{"id":"A27","pred":"tao:has_database_id","subj":"27","obj":"MESH:D007659"},{"subj":"22","pred":"source","obj":"LitCovid-PubTator"},{"subj":"23","pred":"source","obj":"LitCovid-PubTator"},{"subj":"24","pred":"source","obj":"LitCovid-PubTator"},{"subj":"25","pred":"source","obj":"LitCovid-PubTator"},{"subj":"27","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#d1ec93","default":true},{"id":"LitCovid-PD-MONDO","color":"#ec93ec"},{"id":"LitCovid-PD-CLO","color":"#93ecd2"},{"id":"LitCovid-PD-CHEBI","color":"#ecb893"},{"id":"LitCovid-PD-GO-BP","color":"#9e93ec"},{"id":"LitCovid-sentences","color":"#a1ec93"},{"id":"LitCovid-PubTator","color":"#ec93bb"}]}]}}