PMC:7558333 / 8552-8926 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7558333","sourcedb":"PMC","sourceid":"7558333","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7558333","text":"A cohort of 45 COVID-19 intubated and mechanically ventilated patients for ARDS was followed. Patients benefited from a systematic screening for Aspergillus. Overall, 211 respiratory samples (culture and PCR) and 32 serum samples (GM detection and Aspergillus PCR) were collected. The mean number of respiratory samples until patient discharge from ICU was 3.8 (median = 3).","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T23","span":{"begin":216,"end":221},"obj":"Body_part"}],"attributes":[{"id":"A23","pred":"fma_id","subj":"T23","obj":"http://purl.org/sig/ont/fma/fma63083"},{"subj":"T23","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T15","span":{"begin":216,"end":221},"obj":"Body_part"}],"attributes":[{"id":"A15","pred":"uberon_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/UBERON_0001977"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T46","span":{"begin":15,"end":23},"obj":"Disease"},{"id":"T47","span":{"begin":75,"end":79},"obj":"Disease"}],"attributes":[{"id":"A46","pred":"mondo_id","subj":"T46","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A47","pred":"mondo_id","subj":"T47","obj":"http://purl.obolibrary.org/obo/MONDO_0006502"},{"subj":"T46","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T47","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T55","span":{"begin":0,"end":1},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T56","span":{"begin":12,"end":14},"obj":"http://purl.obolibrary.org/obo/CLO_0053799"},{"id":"T57","span":{"begin":118,"end":119},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"attributes":[{"subj":"T55","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T56","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T57","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-GlycoEpitope","denotations":[{"id":"T11","span":{"begin":231,"end":233},"obj":"GlycoEpitope"}],"attributes":[{"id":"A11","pred":"glyco_epitope_db_id","subj":"T11","obj":"http://www.glycoepitope.jp/epitopes/EP0510"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-GlycoEpitope"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T70","span":{"begin":0,"end":93},"obj":"Sentence"},{"id":"T71","span":{"begin":94,"end":157},"obj":"Sentence"},{"id":"T72","span":{"begin":158,"end":280},"obj":"Sentence"},{"id":"T73","span":{"begin":281,"end":374},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T70","pred":"source","obj":"LitCovid-sentences"},{"subj":"T71","pred":"source","obj":"LitCovid-sentences"},{"subj":"T72","pred":"source","obj":"LitCovid-sentences"},{"subj":"T73","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"183","span":{"begin":62,"end":70},"obj":"Species"},{"id":"184","span":{"begin":94,"end":102},"obj":"Species"},{"id":"185","span":{"begin":326,"end":333},"obj":"Species"},{"id":"186","span":{"begin":145,"end":156},"obj":"Species"},{"id":"187","span":{"begin":248,"end":259},"obj":"Species"},{"id":"188","span":{"begin":15,"end":23},"obj":"Disease"},{"id":"189","span":{"begin":75,"end":79},"obj":"Disease"}],"attributes":[{"id":"A183","pred":"tao:has_database_id","subj":"183","obj":"Tax:9606"},{"id":"A184","pred":"tao:has_database_id","subj":"184","obj":"Tax:9606"},{"id":"A185","pred":"tao:has_database_id","subj":"185","obj":"Tax:9606"},{"id":"A186","pred":"tao:has_database_id","subj":"186","obj":"Tax:746128"},{"id":"A187","pred":"tao:has_database_id","subj":"187","obj":"Tax:746128"},{"id":"A188","pred":"tao:has_database_id","subj":"188","obj":"MESH:C000657245"},{"id":"A189","pred":"tao:has_database_id","subj":"189","obj":"MESH:D012128"},{"subj":"183","pred":"source","obj":"LitCovid-PubTator"},{"subj":"184","pred":"source","obj":"LitCovid-PubTator"},{"subj":"185","pred":"source","obj":"LitCovid-PubTator"},{"subj":"186","pred":"source","obj":"LitCovid-PubTator"},{"subj":"187","pred":"source","obj":"LitCovid-PubTator"},{"subj":"188","pred":"source","obj":"LitCovid-PubTator"},{"subj":"189","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#ec93cb","default":true},{"id":"LitCovid-PD-UBERON","color":"#93e5ec"},{"id":"LitCovid-PD-MONDO","color":"#ecd993"},{"id":"LitCovid-PD-CLO","color":"#be93ec"},{"id":"LitCovid-PD-GlycoEpitope","color":"#93eca4"},{"id":"LitCovid-sentences","color":"#ec939b"},{"id":"LitCovid-PubTator","color":"#93b5ec"}]}]}}