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PMC:7556165 / 32562-32860 JSONTXT

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LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T119 51-61 Chemical denotes bradykinin http://purl.obolibrary.org/obo/CHEBI_3165
T120 218-223 Chemical denotes CXCL5 http://purl.obolibrary.org/obo/CHEBI_138180

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T88 115-120 Species denotes mouse NCBItxid:10090|NCBItxid:10088

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T200 0-78 Sentence denotes ACE2 might also modulate lung inflammation via the bradykinin-DABK/BKB1R axis.
T201 79-298 Sentence denotes In fact, decreased ACE2 function in mouse lungs caused increased activity of the DABK axis and triggered a proinflammatory cytokine storm (CXCL5, MIP2, KC, and TNF-α), leading to pulmonary collapse (Sodhi et al., 2018).

LitCovid-sample-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T132 25-29 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
900 0-4 Gene denotes ACE2 Gene:59272
901 67-72 Gene denotes BKB1R Gene:623
902 98-102 Gene denotes ACE2 Gene:70008
903 218-223 Gene denotes CXCL5 Gene:20311
904 225-229 Gene denotes MIP2 Gene:20310
905 239-244 Gene denotes TNF-α Gene:21926
906 115-120 Species denotes mouse Tax:10090
907 25-42 Disease denotes lung inflammation MESH:D011014

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T2521 0-4 Protein denotes ACE2 https://www.uniprot.org/uniprot/Q9UFZ6
T2522 51-61 Protein denotes bradykinin https://www.uniprot.org/uniprot/Q91XK5|https://www.uniprot.org/uniprot/Q90WZ1|https://www.uniprot.org/uniprot/Q90W88|https://www.uniprot.org/uniprot/Q90W16|https://www.uniprot.org/uniprot/Q7T3L1|https://www.uniprot.org/uniprot/Q7M4P1|https://www.uniprot.org/uniprot/Q6S9I1|https://www.uniprot.org/uniprot/Q6PAU9|https://www.uniprot.org/uniprot/Q53EQ0|https://www.uniprot.org/uniprot/Q32MX7|https://www.uniprot.org/uniprot/Q2KJ62|https://www.uniprot.org/uniprot/P86627|https://www.uniprot.org/uniprot/P86156|https://www.uniprot.org/uniprot/P84895|https://www.uniprot.org/uniprot/P84825|https://www.uniprot.org/uniprot/P84697|https://www.uniprot.org/uniprot/P84696|https://www.uniprot.org/uniprot/P84695|https://www.uniprot.org/uniprot/P83857|https://www.uniprot.org/uniprot/P83856|https://www.uniprot.org/uniprot/P83060|https://www.uniprot.org/uniprot/P83055|https://www.uniprot.org/uniprot/P0DM76|https://www.uniprot.org/uniprot/P08934|https://www.uniprot.org/uniprot/P08933|https://www.uniprot.org/uniprot/P01047|https://www.uniprot.org/uniprot/P01046|https://www.uniprot.org/uniprot/P01045|https://www.uniprot.org/uniprot/P01044|https://www.uniprot.org/uniprot/P01043|https://www.uniprot.org/uniprot/P01042|https://www.uniprot.org/uniprot/O08677|https://www.uniprot.org/uniprot/O08676|https://www.uniprot.org/uniprot/C9JEX1|https://www.uniprot.org/uniprot/B2RCR2|https://www.uniprot.org/uniprot/A8K474|https://www.uniprot.org/uniprot/A0A088MIT0
T2559 98-102 Protein denotes ACE2 https://www.uniprot.org/uniprot/Q9UFZ6
T2560 225-229 Protein denotes MIP2 https://www.uniprot.org/uniprot/Q5WA60|https://www.uniprot.org/uniprot/P30348|https://www.uniprot.org/uniprot/P10889

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T96 103-111 http://purl.obolibrary.org/obo/BFO_0000034 denotes function

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T288 25-29 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T289 73-77 Body_part denotes axis http://purl.org/sig/ont/fma/fma12520
T290 121-126 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T291 165-169 Body_part denotes axis http://purl.org/sig/ont/fma/fma12520
T292 202-210 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T92 30-42 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166

LitCovid-sample-PD-MAT

Id Subject Object Predicate Lexical cue
T122 25-29 http://purl.obolibrary.org/obo/MAT_0000135 denotes lung
T123 121-126 http://purl.obolibrary.org/obo/MAT_0000135 denotes lungs

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T87 30-42 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation

LitCovid-sample-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T37 202-216 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T90 30-42 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T40 202-216 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
900 0-4 Gene denotes ACE2 Gene:59272
901 67-72 Gene denotes BKB1R Gene:623
902 98-102 Gene denotes ACE2 Gene:70008
903 218-223 Gene denotes CXCL5 Gene:20311
904 225-229 Gene denotes MIP2 Gene:20310
905 239-244 Gene denotes TNF-α Gene:21926
906 115-120 Species denotes mouse Tax:10090
907 25-42 Disease denotes lung inflammation MESH:D011014

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T200 0-78 Sentence denotes ACE2 might also modulate lung inflammation via the bradykinin-DABK/BKB1R axis.
T201 79-298 Sentence denotes In fact, decreased ACE2 function in mouse lungs caused increased activity of the DABK axis and triggered a proinflammatory cytokine storm (CXCL5, MIP2, KC, and TNF-α), leading to pulmonary collapse (Sodhi et al., 2018).