PMC:7546120 / 2693-3589 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T20","span":{"begin":98,"end":111},"obj":"Body_part"},{"id":"T21","span":{"begin":476,"end":481},"obj":"Body_part"},{"id":"T22","span":{"begin":662,"end":675},"obj":"Body_part"},{"id":"T23","span":{"begin":722,"end":735},"obj":"Body_part"},{"id":"T24","span":{"begin":816,"end":829},"obj":"Body_part"}],"attributes":[{"id":"A20","pred":"fma_id","subj":"T20","obj":"http://purl.org/sig/ont/fma/fma12273"},{"id":"A21","pred":"fma_id","subj":"T21","obj":"http://purl.org/sig/ont/fma/fma9576"},{"id":"A22","pred":"fma_id","subj":"T22","obj":"http://purl.org/sig/ont/fma/fma12273"},{"id":"A23","pred":"fma_id","subj":"T23","obj":"http://purl.org/sig/ont/fma/fma12273"},{"id":"A24","pred":"fma_id","subj":"T24","obj":"http://purl.org/sig/ont/fma/fma12273"}],"text":"To our knowledge, this is a novel description of COVID-19 related pleural effusion describing the pleural fluid analysis of virus detection confirmed by RT-PCR and behaving as a complicated parapneumonic effusion. There is a paucity of data describing the pleural complications in relation to the viral infections in general. A prior study by Cohen and Sahn,1 reported an 8% incidence of pleural effusions in patients with acute viral infection, while using lateral decubitus chest X-rays incidence is reported to be 18%. However, the true incidence of viral related pleural effusion may be even higher if pleural ultrasonography is used as a screening tool for pleural fluid presence. In a review by Nestor et al., 2 the pleural fluid analysis in viral related pleural effusion is variable and typically exudative. Pleural fluid appearance can range from serous, serosanguineous, to hemorrhagic."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T18","span":{"begin":66,"end":82},"obj":"Body_part"},{"id":"T19","span":{"begin":98,"end":111},"obj":"Body_part"},{"id":"T20","span":{"begin":388,"end":405},"obj":"Body_part"},{"id":"T21","span":{"begin":476,"end":481},"obj":"Body_part"},{"id":"T22","span":{"begin":567,"end":583},"obj":"Body_part"},{"id":"T23","span":{"begin":662,"end":675},"obj":"Body_part"},{"id":"T24","span":{"begin":722,"end":735},"obj":"Body_part"},{"id":"T25","span":{"begin":762,"end":778},"obj":"Body_part"},{"id":"T26","span":{"begin":816,"end":829},"obj":"Body_part"}],"attributes":[{"id":"A18","pred":"uberon_id","subj":"T18","obj":"http://purl.obolibrary.org/obo/UBERON_0000175"},{"id":"A19","pred":"uberon_id","subj":"T19","obj":"http://purl.obolibrary.org/obo/UBERON_0001087"},{"id":"A20","pred":"uberon_id","subj":"T20","obj":"http://purl.obolibrary.org/obo/UBERON_0000175"},{"id":"A21","pred":"uberon_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"},{"id":"A22","pred":"uberon_id","subj":"T22","obj":"http://purl.obolibrary.org/obo/UBERON_0000175"},{"id":"A23","pred":"uberon_id","subj":"T23","obj":"http://purl.obolibrary.org/obo/UBERON_0001087"},{"id":"A24","pred":"uberon_id","subj":"T24","obj":"http://purl.obolibrary.org/obo/UBERON_0001087"},{"id":"A25","pred":"uberon_id","subj":"T25","obj":"http://purl.obolibrary.org/obo/UBERON_0000175"},{"id":"A26","pred":"uberon_id","subj":"T26","obj":"http://purl.obolibrary.org/obo/UBERON_0001087"}],"text":"To our knowledge, this is a novel description of COVID-19 related pleural effusion describing the pleural fluid analysis of virus detection confirmed by RT-PCR and behaving as a complicated parapneumonic effusion. There is a paucity of data describing the pleural complications in relation to the viral infections in general. A prior study by Cohen and Sahn,1 reported an 8% incidence of pleural effusions in patients with acute viral infection, while using lateral decubitus chest X-rays incidence is reported to be 18%. However, the true incidence of viral related pleural effusion may be even higher if pleural ultrasonography is used as a screening tool for pleural fluid presence. In a review by Nestor et al., 2 the pleural fluid analysis in viral related pleural effusion is variable and typically exudative. Pleural fluid appearance can range from serous, serosanguineous, to hemorrhagic."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T18","span":{"begin":49,"end":57},"obj":"Disease"},{"id":"T19","span":{"begin":297,"end":316},"obj":"Disease"},{"id":"T20","span":{"begin":429,"end":444},"obj":"Disease"},{"id":"T21","span":{"begin":435,"end":444},"obj":"Disease"}],"attributes":[{"id":"A18","pred":"mondo_id","subj":"T18","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A19","pred":"mondo_id","subj":"T19","obj":"http://purl.obolibrary.org/obo/MONDO_0005108"},{"id":"A20","pred":"mondo_id","subj":"T20","obj":"http://purl.obolibrary.org/obo/MONDO_0005108"},{"id":"A21","pred":"mondo_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"}],"text":"To our knowledge, this is a novel description of COVID-19 related pleural effusion describing the pleural fluid analysis of virus detection confirmed by RT-PCR and behaving as a complicated parapneumonic effusion. There is a paucity of data describing the pleural complications in relation to the viral infections in general. A prior study by Cohen and Sahn,1 reported an 8% incidence of pleural effusions in patients with acute viral infection, while using lateral decubitus chest X-rays incidence is reported to be 18%. However, the true incidence of viral related pleural effusion may be even higher if pleural ultrasonography is used as a screening tool for pleural fluid presence. In a review by Nestor et al., 2 the pleural fluid analysis in viral related pleural effusion is variable and typically exudative. Pleural fluid appearance can range from serous, serosanguineous, to hemorrhagic."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T35","span":{"begin":26,"end":27},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T36","span":{"begin":66,"end":82},"obj":"http://purl.obolibrary.org/obo/UBERON_0000175"},{"id":"T37","span":{"begin":124,"end":129},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T38","span":{"begin":176,"end":177},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T39","span":{"begin":223,"end":224},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T40","span":{"begin":326,"end":327},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T41","span":{"begin":388,"end":405},"obj":"http://purl.obolibrary.org/obo/UBERON_0000175"},{"id":"T42","span":{"begin":476,"end":481},"obj":"http://www.ebi.ac.uk/efo/EFO_0000965"},{"id":"T43","span":{"begin":517,"end":519},"obj":"http://purl.obolibrary.org/obo/CLO_0050510"},{"id":"T44","span":{"begin":567,"end":583},"obj":"http://purl.obolibrary.org/obo/UBERON_0000175"},{"id":"T45","span":{"begin":641,"end":642},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T46","span":{"begin":689,"end":690},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T47","span":{"begin":762,"end":778},"obj":"http://purl.obolibrary.org/obo/UBERON_0000175"}],"text":"To our knowledge, this is a novel description of COVID-19 related pleural effusion describing the pleural fluid analysis of virus detection confirmed by RT-PCR and behaving as a complicated parapneumonic effusion. There is a paucity of data describing the pleural complications in relation to the viral infections in general. A prior study by Cohen and Sahn,1 reported an 8% incidence of pleural effusions in patients with acute viral infection, while using lateral decubitus chest X-rays incidence is reported to be 18%. However, the true incidence of viral related pleural effusion may be even higher if pleural ultrasonography is used as a screening tool for pleural fluid presence. In a review by Nestor et al., 2 the pleural fluid analysis in viral related pleural effusion is variable and typically exudative. Pleural fluid appearance can range from serous, serosanguineous, to hemorrhagic."}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T3","span":{"begin":297,"end":313},"obj":"http://purl.obolibrary.org/obo/GO_0016032"},{"id":"T4","span":{"begin":429,"end":444},"obj":"http://purl.obolibrary.org/obo/GO_0016032"}],"text":"To our knowledge, this is a novel description of COVID-19 related pleural effusion describing the pleural fluid analysis of virus detection confirmed by RT-PCR and behaving as a complicated parapneumonic effusion. There is a paucity of data describing the pleural complications in relation to the viral infections in general. A prior study by Cohen and Sahn,1 reported an 8% incidence of pleural effusions in patients with acute viral infection, while using lateral decubitus chest X-rays incidence is reported to be 18%. However, the true incidence of viral related pleural effusion may be even higher if pleural ultrasonography is used as a screening tool for pleural fluid presence. In a review by Nestor et al., 2 the pleural fluid analysis in viral related pleural effusion is variable and typically exudative. Pleural fluid appearance can range from serous, serosanguineous, to hemorrhagic."}

{"project":"LitCovid-sentences","denotations":[{"id":"T23","span":{"begin":0,"end":213},"obj":"Sentence"},{"id":"T24","span":{"begin":214,"end":325},"obj":"Sentence"},{"id":"T25","span":{"begin":326,"end":521},"obj":"Sentence"},{"id":"T26","span":{"begin":522,"end":685},"obj":"Sentence"},{"id":"T27","span":{"begin":686,"end":815},"obj":"Sentence"},{"id":"T28","span":{"begin":816,"end":896},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"To our knowledge, this is a novel description of COVID-19 related pleural effusion describing the pleural fluid analysis of virus detection confirmed by RT-PCR and behaving as a complicated parapneumonic effusion. There is a paucity of data describing the pleural complications in relation to the viral infections in general. A prior study by Cohen and Sahn,1 reported an 8% incidence of pleural effusions in patients with acute viral infection, while using lateral decubitus chest X-rays incidence is reported to be 18%. However, the true incidence of viral related pleural effusion may be even higher if pleural ultrasonography is used as a screening tool for pleural fluid presence. In a review by Nestor et al., 2 the pleural fluid analysis in viral related pleural effusion is variable and typically exudative. Pleural fluid appearance can range from serous, serosanguineous, to hemorrhagic."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T14","span":{"begin":66,"end":82},"obj":"Phenotype"},{"id":"T15","span":{"begin":388,"end":405},"obj":"Phenotype"},{"id":"T16","span":{"begin":567,"end":583},"obj":"Phenotype"},{"id":"T17","span":{"begin":762,"end":778},"obj":"Phenotype"}],"attributes":[{"id":"A14","pred":"hp_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/HP_0002202"},{"id":"A15","pred":"hp_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/HP_0002202"},{"id":"A16","pred":"hp_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/HP_0002202"},{"id":"A17","pred":"hp_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/HP_0002202"}],"text":"To our knowledge, this is a novel description of COVID-19 related pleural effusion describing the pleural fluid analysis of virus detection confirmed by RT-PCR and behaving as a complicated parapneumonic effusion. There is a paucity of data describing the pleural complications in relation to the viral infections in general. A prior study by Cohen and Sahn,1 reported an 8% incidence of pleural effusions in patients with acute viral infection, while using lateral decubitus chest X-rays incidence is reported to be 18%. However, the true incidence of viral related pleural effusion may be even higher if pleural ultrasonography is used as a screening tool for pleural fluid presence. In a review by Nestor et al., 2 the pleural fluid analysis in viral related pleural effusion is variable and typically exudative. Pleural fluid appearance can range from serous, serosanguineous, to hemorrhagic."}

{"project":"LitCovid-PubTator","denotations":[{"id":"69","span":{"begin":409,"end":417},"obj":"Species"},{"id":"70","span":{"begin":49,"end":57},"obj":"Disease"},{"id":"71","span":{"begin":66,"end":82},"obj":"Disease"},{"id":"72","span":{"begin":190,"end":212},"obj":"Disease"},{"id":"73","span":{"begin":256,"end":277},"obj":"Disease"},{"id":"74","span":{"begin":297,"end":313},"obj":"Disease"},{"id":"75","span":{"begin":388,"end":405},"obj":"Disease"},{"id":"76","span":{"begin":429,"end":444},"obj":"Disease"},{"id":"77","span":{"begin":567,"end":583},"obj":"Disease"},{"id":"78","span":{"begin":762,"end":778},"obj":"Disease"},{"id":"79","span":{"begin":884,"end":895},"obj":"Disease"}],"attributes":[{"id":"A69","pred":"tao:has_database_id","subj":"69","obj":"Tax:9606"},{"id":"A70","pred":"tao:has_database_id","subj":"70","obj":"MESH:C000657245"},{"id":"A71","pred":"tao:has_database_id","subj":"71","obj":"MESH:D010996"},{"id":"A72","pred":"tao:has_database_id","subj":"72","obj":"MESH:D010996"},{"id":"A73","pred":"tao:has_database_id","subj":"73","obj":"MESH:D010995"},{"id":"A74","pred":"tao:has_database_id","subj":"74","obj":"MESH:D001102"},{"id":"A75","pred":"tao:has_database_id","subj":"75","obj":"MESH:D010996"},{"id":"A76","pred":"tao:has_database_id","subj":"76","obj":"MESH:D001102"},{"id":"A77","pred":"tao:has_database_id","subj":"77","obj":"MESH:D010996"},{"id":"A78","pred":"tao:has_database_id","subj":"78","obj":"MESH:D010996"},{"id":"A79","pred":"tao:has_database_id","subj":"79","obj":"MESH:D006470"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"To our knowledge, this is a novel description of COVID-19 related pleural effusion describing the pleural fluid analysis of virus detection confirmed by RT-PCR and behaving as a complicated parapneumonic effusion. There is a paucity of data describing the pleural complications in relation to the viral infections in general. A prior study by Cohen and Sahn,1 reported an 8% incidence of pleural effusions in patients with acute viral infection, while using lateral decubitus chest X-rays incidence is reported to be 18%. However, the true incidence of viral related pleural effusion may be even higher if pleural ultrasonography is used as a screening tool for pleural fluid presence. In a review by Nestor et al., 2 the pleural fluid analysis in viral related pleural effusion is variable and typically exudative. Pleural fluid appearance can range from serous, serosanguineous, to hemorrhagic."}

{"project":"2_test","denotations":[{"id":"32936903-11348966-133098628","span":{"begin":358,"end":359},"obj":"11348966"},{"id":"32936903-23916378-133098629","span":{"begin":716,"end":717},"obj":"23916378"}],"text":"To our knowledge, this is a novel description of COVID-19 related pleural effusion describing the pleural fluid analysis of virus detection confirmed by RT-PCR and behaving as a complicated parapneumonic effusion. There is a paucity of data describing the pleural complications in relation to the viral infections in general. A prior study by Cohen and Sahn,1 reported an 8% incidence of pleural effusions in patients with acute viral infection, while using lateral decubitus chest X-rays incidence is reported to be 18%. However, the true incidence of viral related pleural effusion may be even higher if pleural ultrasonography is used as a screening tool for pleural fluid presence. In a review by Nestor et al., 2 the pleural fluid analysis in viral related pleural effusion is variable and typically exudative. Pleural fluid appearance can range from serous, serosanguineous, to hemorrhagic."}