PMC:7546120 / 2693-3589
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T20 | 98-111 | Body_part | denotes | pleural fluid | http://purl.org/sig/ont/fma/fma12273 |
| T21 | 476-481 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T22 | 662-675 | Body_part | denotes | pleural fluid | http://purl.org/sig/ont/fma/fma12273 |
| T23 | 722-735 | Body_part | denotes | pleural fluid | http://purl.org/sig/ont/fma/fma12273 |
| T24 | 816-829 | Body_part | denotes | Pleural fluid | http://purl.org/sig/ont/fma/fma12273 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T18 | 66-82 | Body_part | denotes | pleural effusion | http://purl.obolibrary.org/obo/UBERON_0000175 |
| T19 | 98-111 | Body_part | denotes | pleural fluid | http://purl.obolibrary.org/obo/UBERON_0001087 |
| T20 | 388-405 | Body_part | denotes | pleural effusions | http://purl.obolibrary.org/obo/UBERON_0000175 |
| T21 | 476-481 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T22 | 567-583 | Body_part | denotes | pleural effusion | http://purl.obolibrary.org/obo/UBERON_0000175 |
| T23 | 662-675 | Body_part | denotes | pleural fluid | http://purl.obolibrary.org/obo/UBERON_0001087 |
| T24 | 722-735 | Body_part | denotes | pleural fluid | http://purl.obolibrary.org/obo/UBERON_0001087 |
| T25 | 762-778 | Body_part | denotes | pleural effusion | http://purl.obolibrary.org/obo/UBERON_0000175 |
| T26 | 816-829 | Body_part | denotes | Pleural fluid | http://purl.obolibrary.org/obo/UBERON_0001087 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T18 | 49-57 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T19 | 297-316 | Disease | denotes | viral infections in | http://purl.obolibrary.org/obo/MONDO_0005108 |
| T20 | 429-444 | Disease | denotes | viral infection | http://purl.obolibrary.org/obo/MONDO_0005108 |
| T21 | 435-444 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T35 | 26-27 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T36 | 66-82 | http://purl.obolibrary.org/obo/UBERON_0000175 | denotes | pleural effusion |
| T37 | 124-129 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T38 | 176-177 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T39 | 223-224 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T40 | 326-327 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T41 | 388-405 | http://purl.obolibrary.org/obo/UBERON_0000175 | denotes | pleural effusions |
| T42 | 476-481 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T43 | 517-519 | http://purl.obolibrary.org/obo/CLO_0050510 | denotes | 18 |
| T44 | 567-583 | http://purl.obolibrary.org/obo/UBERON_0000175 | denotes | pleural effusion |
| T45 | 641-642 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T46 | 689-690 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T47 | 762-778 | http://purl.obolibrary.org/obo/UBERON_0000175 | denotes | pleural effusion |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 297-313 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | viral infections |
| T4 | 429-444 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | viral infection |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T23 | 0-213 | Sentence | denotes | To our knowledge, this is a novel description of COVID-19 related pleural effusion describing the pleural fluid analysis of virus detection confirmed by RT-PCR and behaving as a complicated parapneumonic effusion. |
| T24 | 214-325 | Sentence | denotes | There is a paucity of data describing the pleural complications in relation to the viral infections in general. |
| T25 | 326-521 | Sentence | denotes | A prior study by Cohen and Sahn,1 reported an 8% incidence of pleural effusions in patients with acute viral infection, while using lateral decubitus chest X-rays incidence is reported to be 18%. |
| T26 | 522-685 | Sentence | denotes | However, the true incidence of viral related pleural effusion may be even higher if pleural ultrasonography is used as a screening tool for pleural fluid presence. |
| T27 | 686-815 | Sentence | denotes | In a review by Nestor et al., 2 the pleural fluid analysis in viral related pleural effusion is variable and typically exudative. |
| T28 | 816-896 | Sentence | denotes | Pleural fluid appearance can range from serous, serosanguineous, to hemorrhagic. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T14 | 66-82 | Phenotype | denotes | pleural effusion | http://purl.obolibrary.org/obo/HP_0002202 |
| T15 | 388-405 | Phenotype | denotes | pleural effusions | http://purl.obolibrary.org/obo/HP_0002202 |
| T16 | 567-583 | Phenotype | denotes | pleural effusion | http://purl.obolibrary.org/obo/HP_0002202 |
| T17 | 762-778 | Phenotype | denotes | pleural effusion | http://purl.obolibrary.org/obo/HP_0002202 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 69 | 409-417 | Species | denotes | patients | Tax:9606 |
| 70 | 49-57 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 71 | 66-82 | Disease | denotes | pleural effusion | MESH:D010996 |
| 72 | 190-212 | Disease | denotes | parapneumonic effusion | MESH:D010996 |
| 73 | 256-277 | Disease | denotes | pleural complications | MESH:D010995 |
| 74 | 297-313 | Disease | denotes | viral infections | MESH:D001102 |
| 75 | 388-405 | Disease | denotes | pleural effusions | MESH:D010996 |
| 76 | 429-444 | Disease | denotes | viral infection | MESH:D001102 |
| 77 | 567-583 | Disease | denotes | pleural effusion | MESH:D010996 |
| 78 | 762-778 | Disease | denotes | pleural effusion | MESH:D010996 |
| 79 | 884-895 | Disease | denotes | hemorrhagic | MESH:D006470 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32936903-11348966-133098628 | 358-359 | 11348966 | denotes | 1 |
| 32936903-23916378-133098629 | 716-717 | 23916378 | denotes | 2 |