PMC:7543426 / 9938-11078 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7543426","sourcedb":"PMC","sourceid":"7543426","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7543426","text":"Macroscopic Findings.\nLungs from all patients were increased in volume, firm, edematous, and congested with diffuse pleural thickening and pleural effusion. Cut surface showed consolidation of lobes and red congested areas, with thickening of the interstitial septa and pulmonary edema (Figure 1A1). Subsegmental pulmonary embolism was seen in 5 cases.\nFigure 1. Pathological findings in lung. A1, Lungs showed an increase in volume and were firmer and heavier than normal. A2 and A3, Light microscopic analysis shows parenchymal multifocal damage with intraalveolar inflammation, fibrin, and hyaline membranes consistent with a diagnosis of diffuse alveolar damage. Both acute exudative inflammatory process and fibrous proliferative phase were found. A3 and A4, Hyperplasia of type II pneumocyte, characterized by amphophilic cytoplasm, large nuclei, and prominent nucleoli, are shown (arrows). B1, Alveolar duct fibrosis. B2, Fibrin thrombi in capillaries. B3, Vascular injury including vessel vasculitis and vascular edema. B4, Pleural fibrosis. Abbreviation: H\u0026E, haematoxylin and eosin. Scale bars: A2, 14 µm; A3–B3, 7 µm; B4, 21 µm.","divisions":[{"label":"title","span":{"begin":0,"end":21}},{"label":"p","span":{"begin":22,"end":352}},{"label":"label","span":{"begin":353,"end":362}}],"tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T52","span":{"begin":22,"end":27},"obj":"Body_part"},{"id":"T53","span":{"begin":389,"end":393},"obj":"Body_part"},{"id":"T54","span":{"begin":395,"end":397},"obj":"Body_part"},{"id":"T55","span":{"begin":399,"end":404},"obj":"Body_part"},{"id":"T56","span":{"begin":475,"end":477},"obj":"Body_part"},{"id":"T57","span":{"begin":482,"end":484},"obj":"Body_part"},{"id":"T58","span":{"begin":651,"end":659},"obj":"Body_part"},{"id":"T59","span":{"begin":754,"end":756},"obj":"Body_part"},{"id":"T60","span":{"begin":788,"end":798},"obj":"Body_part"},{"id":"T61","span":{"begin":829,"end":838},"obj":"Body_part"},{"id":"T62","span":{"begin":902,"end":915},"obj":"Body_part"},{"id":"T63","span":{"begin":948,"end":959},"obj":"Body_part"},{"id":"T64","span":{"begin":1106,"end":1108},"obj":"Body_part"},{"id":"T65","span":{"begin":1117,"end":1119},"obj":"Body_part"}],"attributes":[{"id":"A52","pred":"fma_id","subj":"T52","obj":"http://purl.org/sig/ont/fma/fma68877"},{"id":"A53","pred":"fma_id","subj":"T53","obj":"http://purl.org/sig/ont/fma/fma7195"},{"id":"A54","pred":"fma_id","subj":"T54","obj":"http://purl.org/sig/ont/fma/fma66592"},{"id":"A55","pred":"fma_id","subj":"T55","obj":"http://purl.org/sig/ont/fma/fma68877"},{"id":"A56","pred":"fma_id","subj":"T56","obj":"http://purl.org/sig/ont/fma/fma66595"},{"id":"A57","pred":"fma_id","subj":"T57","obj":"http://purl.org/sig/ont/fma/fma66599"},{"id":"A58","pred":"fma_id","subj":"T58","obj":"http://purl.org/sig/ont/fma/fma264783"},{"id":"A59","pred":"fma_id","subj":"T59","obj":"http://purl.org/sig/ont/fma/fma66599"},{"id":"A60","pred":"fma_id","subj":"T60","obj":"http://purl.org/sig/ont/fma/fma62499"},{"id":"A61","pred":"fma_id","subj":"T61","obj":"http://purl.org/sig/ont/fma/fma66835"},{"id":"A62","pred":"fma_id","subj":"T62","obj":"http://purl.org/sig/ont/fma/fma7341"},{"id":"A63","pred":"fma_id","subj":"T63","obj":"http://purl.org/sig/ont/fma/fma63194"},{"id":"A64","pred":"fma_id","subj":"T64","obj":"http://purl.org/sig/ont/fma/fma66595"},{"id":"A65","pred":"fma_id","subj":"T65","obj":"http://purl.org/sig/ont/fma/fma66599"},{"subj":"T52","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T53","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T54","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T55","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T56","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T57","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T58","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T59","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T60","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T61","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T62","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T63","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T64","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T65","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T44","span":{"begin":139,"end":155},"obj":"Body_part"},{"id":"T45","span":{"begin":389,"end":393},"obj":"Body_part"},{"id":"T46","span":{"begin":911,"end":915},"obj":"Body_part"},{"id":"T47","span":{"begin":991,"end":997},"obj":"Body_part"},{"id":"T48","span":{"begin":1094,"end":1099},"obj":"Body_part"}],"attributes":[{"id":"A44","pred":"uberon_id","subj":"T44","obj":"http://purl.obolibrary.org/obo/UBERON_0000175"},{"id":"A45","pred":"uberon_id","subj":"T45","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A46","pred":"uberon_id","subj":"T46","obj":"http://purl.obolibrary.org/obo/UBERON_0000058"},{"id":"A47","pred":"uberon_id","subj":"T47","obj":"http://purl.obolibrary.org/obo/UBERON_0000055"},{"id":"A48","pred":"uberon_id","subj":"T48","obj":"http://purl.obolibrary.org/obo/UBERON_0002542"},{"subj":"T44","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T45","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T46","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T47","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T48","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T110","span":{"begin":270,"end":285},"obj":"Disease"},{"id":"T111","span":{"begin":313,"end":331},"obj":"Disease"},{"id":"T112","span":{"begin":568,"end":580},"obj":"Disease"},{"id":"T113","span":{"begin":765,"end":776},"obj":"Disease"},{"id":"T114","span":{"begin":974,"end":980},"obj":"Disease"},{"id":"T115","span":{"begin":998,"end":1008},"obj":"Disease"}],"attributes":[{"id":"A110","pred":"mondo_id","subj":"T110","obj":"http://purl.obolibrary.org/obo/MONDO_0006932"},{"id":"A111","pred":"mondo_id","subj":"T111","obj":"http://purl.obolibrary.org/obo/MONDO_0005279"},{"id":"A112","pred":"mondo_id","subj":"T112","obj":"http://purl.obolibrary.org/obo/MONDO_0021166"},{"id":"A113","pred":"mondo_id","subj":"T113","obj":"http://purl.obolibrary.org/obo/MONDO_0005043"},{"id":"A114","pred":"mondo_id","subj":"T114","obj":"http://purl.obolibrary.org/obo/MONDO_0021178"},{"id":"A115","pred":"mondo_id","subj":"T115","obj":"http://purl.obolibrary.org/obo/MONDO_0018882"},{"subj":"T110","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T111","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T112","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T113","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T114","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T115","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T131","span":{"begin":399,"end":404},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"},{"id":"T127","span":{"begin":22,"end":27},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"},{"id":"T128","span":{"begin":139,"end":155},"obj":"http://purl.obolibrary.org/obo/UBERON_0000175"},{"id":"T129","span":{"begin":389,"end":393},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"T130","span":{"begin":389,"end":393},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"},{"id":"T132","span":{"begin":475,"end":477},"obj":"http://purl.obolibrary.org/obo/CLO_0001562"},{"id":"T133","span":{"begin":482,"end":484},"obj":"http://purl.obolibrary.org/obo/CLO_0001577"},{"id":"T134","span":{"begin":602,"end":611},"obj":"http://purl.obolibrary.org/obo/UBERON_0000158"},{"id":"T135","span":{"begin":628,"end":629},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T136","span":{"begin":754,"end":756},"obj":"http://purl.obolibrary.org/obo/CLO_0001577"},{"id":"T137","span":{"begin":911,"end":915},"obj":"http://purl.obolibrary.org/obo/UBERON_0000025"},{"id":"T138","span":{"begin":911,"end":915},"obj":"http://purl.obolibrary.org/obo/UBERON_0000058"},{"id":"T139","span":{"begin":961,"end":963},"obj":"http://purl.obolibrary.org/obo/CLO_0001812"},{"id":"T140","span":{"begin":991,"end":997},"obj":"http://purl.obolibrary.org/obo/UBERON_0000055"},{"id":"T141","span":{"begin":1106,"end":1108},"obj":"http://purl.obolibrary.org/obo/CLO_0001562"},{"id":"T142","span":{"begin":1117,"end":1119},"obj":"http://purl.obolibrary.org/obo/CLO_0001577"},{"id":"T143","span":{"begin":1120,"end":1122},"obj":"http://purl.obolibrary.org/obo/CLO_0001812"}],"attributes":[{"subj":"T131","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T127","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T128","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T129","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T130","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T132","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T133","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T134","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T135","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T136","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T137","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T138","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T139","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T140","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T141","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T142","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T143","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"285","span":{"begin":37,"end":45},"obj":"Species"},{"id":"286","span":{"begin":78,"end":87},"obj":"Disease"},{"id":"287","span":{"begin":139,"end":155},"obj":"Disease"},{"id":"288","span":{"begin":270,"end":285},"obj":"Disease"},{"id":"289","span":{"begin":300,"end":331},"obj":"Disease"},{"id":"303","span":{"begin":1065,"end":1068},"obj":"Chemical"},{"id":"304","span":{"begin":1070,"end":1082},"obj":"Chemical"},{"id":"305","span":{"begin":1087,"end":1092},"obj":"Chemical"},{"id":"306","span":{"begin":519,"end":548},"obj":"Disease"},{"id":"307","span":{"begin":568,"end":580},"obj":"Disease"},{"id":"308","span":{"begin":651,"end":666},"obj":"Disease"},{"id":"309","span":{"begin":765,"end":798},"obj":"Disease"},{"id":"310","span":{"begin":916,"end":924},"obj":"Disease"},{"id":"311","span":{"begin":937,"end":944},"obj":"Disease"},{"id":"312","span":{"begin":965,"end":980},"obj":"Disease"},{"id":"313","span":{"begin":991,"end":1008},"obj":"Disease"},{"id":"314","span":{"begin":1013,"end":1027},"obj":"Disease"},{"id":"315","span":{"begin":1033,"end":1049},"obj":"Disease"}],"attributes":[{"id":"A285","pred":"tao:has_database_id","subj":"285","obj":"Tax:9606"},{"id":"A286","pred":"tao:has_database_id","subj":"286","obj":"MESH:D004487"},{"id":"A287","pred":"tao:has_database_id","subj":"287","obj":"MESH:D010996"},{"id":"A288","pred":"tao:has_database_id","subj":"288","obj":"MESH:D011654"},{"id":"A289","pred":"tao:has_database_id","subj":"289","obj":"MESH:D011655"},{"id":"A304","pred":"tao:has_database_id","subj":"304","obj":"MESH:D006416"},{"id":"A305","pred":"tao:has_database_id","subj":"305","obj":"MESH:D004801"},{"id":"A306","pred":"tao:has_database_id","subj":"306","obj":"MESH:D002543"},{"id":"A307","pred":"tao:has_database_id","subj":"307","obj":"MESH:D007249"},{"id":"A308","pred":"tao:has_database_id","subj":"308","obj":"MESH:D055370"},{"id":"A309","pred":"tao:has_database_id","subj":"309","obj":"MESH:D006965"},{"id":"A310","pred":"tao:has_database_id","subj":"310","obj":"MESH:D005355"},{"id":"A311","pred":"tao:has_database_id","subj":"311","obj":"MESH:D013927"},{"id":"A312","pred":"tao:has_database_id","subj":"312","obj":"MESH:D057772"},{"id":"A313","pred":"tao:has_database_id","subj":"313","obj":"MESH:D014657"},{"id":"A314","pred":"tao:has_database_id","subj":"314","obj":"MESH:D004487"},{"id":"A315","pred":"tao:has_database_id","subj":"315","obj":"MESH:D005355"},{"subj":"285","pred":"source","obj":"LitCovid-PubTator"},{"subj":"286","pred":"source","obj":"LitCovid-PubTator"},{"subj":"287","pred":"source","obj":"LitCovid-PubTator"},{"subj":"288","pred":"source","obj":"LitCovid-PubTator"},{"subj":"289","pred":"source","obj":"LitCovid-PubTator"},{"subj":"303","pred":"source","obj":"LitCovid-PubTator"},{"subj":"304","pred":"source","obj":"LitCovid-PubTator"},{"subj":"305","pred":"source","obj":"LitCovid-PubTator"},{"subj":"306","pred":"source","obj":"LitCovid-PubTator"},{"subj":"307","pred":"source","obj":"LitCovid-PubTator"},{"subj":"308","pred":"source","obj":"LitCovid-PubTator"},{"subj":"309","pred":"source","obj":"LitCovid-PubTator"},{"subj":"310","pred":"source","obj":"LitCovid-PubTator"},{"subj":"311","pred":"source","obj":"LitCovid-PubTator"},{"subj":"312","pred":"source","obj":"LitCovid-PubTator"},{"subj":"313","pred":"source","obj":"LitCovid-PubTator"},{"subj":"314","pred":"source","obj":"LitCovid-PubTator"},{"subj":"315","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T39","span":{"begin":116,"end":134},"obj":"Phenotype"},{"id":"T40","span":{"begin":139,"end":155},"obj":"Phenotype"},{"id":"T41","span":{"begin":270,"end":285},"obj":"Phenotype"},{"id":"T42","span":{"begin":313,"end":331},"obj":"Phenotype"},{"id":"T43","span":{"begin":643,"end":666},"obj":"Phenotype"},{"id":"T44","span":{"begin":998,"end":1008},"obj":"Phenotype"},{"id":"T45","span":{"begin":1022,"end":1027},"obj":"Phenotype"}],"attributes":[{"id":"A39","pred":"hp_id","subj":"T39","obj":"http://purl.obolibrary.org/obo/HP_0031944"},{"id":"A40","pred":"hp_id","subj":"T40","obj":"http://purl.obolibrary.org/obo/HP_0002202"},{"id":"A41","pred":"hp_id","subj":"T41","obj":"http://purl.obolibrary.org/obo/HP_0100598"},{"id":"A42","pred":"hp_id","subj":"T42","obj":"http://purl.obolibrary.org/obo/HP_0002204"},{"id":"A43","pred":"hp_id","subj":"T43","obj":"http://purl.obolibrary.org/obo/HP_0033006"},{"id":"A44","pred":"hp_id","subj":"T44","obj":"http://purl.obolibrary.org/obo/HP_0002633"},{"id":"A45","pred":"hp_id","subj":"T45","obj":"http://purl.obolibrary.org/obo/HP_0000969"},{"subj":"T39","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T40","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T41","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T42","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T43","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T44","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T45","pred":"source","obj":"LitCovid-PD-HP"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T4","span":{"begin":568,"end":580},"obj":"http://purl.obolibrary.org/obo/GO_0006954"}],"attributes":[{"subj":"T4","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T110","span":{"begin":0,"end":21},"obj":"Sentence"},{"id":"T111","span":{"begin":22,"end":156},"obj":"Sentence"},{"id":"T112","span":{"begin":157,"end":299},"obj":"Sentence"},{"id":"T113","span":{"begin":300,"end":352},"obj":"Sentence"},{"id":"T114","span":{"begin":353,"end":362},"obj":"Sentence"},{"id":"T115","span":{"begin":364,"end":394},"obj":"Sentence"},{"id":"T116","span":{"begin":395,"end":474},"obj":"Sentence"},{"id":"T117","span":{"begin":475,"end":667},"obj":"Sentence"},{"id":"T118","span":{"begin":668,"end":753},"obj":"Sentence"},{"id":"T119","span":{"begin":754,"end":897},"obj":"Sentence"},{"id":"T120","span":{"begin":898,"end":925},"obj":"Sentence"},{"id":"T121","span":{"begin":926,"end":960},"obj":"Sentence"},{"id":"T122","span":{"begin":961,"end":1028},"obj":"Sentence"},{"id":"T123","span":{"begin":1029,"end":1050},"obj":"Sentence"},{"id":"T124","span":{"begin":1051,"end":1093},"obj":"Sentence"},{"id":"T125","span":{"begin":1094,"end":1140},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T110","pred":"source","obj":"LitCovid-sentences"},{"subj":"T111","pred":"source","obj":"LitCovid-sentences"},{"subj":"T112","pred":"source","obj":"LitCovid-sentences"},{"subj":"T113","pred":"source","obj":"LitCovid-sentences"},{"subj":"T114","pred":"source","obj":"LitCovid-sentences"},{"subj":"T115","pred":"source","obj":"LitCovid-sentences"},{"subj":"T116","pred":"source","obj":"LitCovid-sentences"},{"subj":"T117","pred":"source","obj":"LitCovid-sentences"},{"subj":"T118","pred":"source","obj":"LitCovid-sentences"},{"subj":"T119","pred":"source","obj":"LitCovid-sentences"},{"subj":"T120","pred":"source","obj":"LitCovid-sentences"},{"subj":"T121","pred":"source","obj":"LitCovid-sentences"},{"subj":"T122","pred":"source","obj":"LitCovid-sentences"},{"subj":"T123","pred":"source","obj":"LitCovid-sentences"},{"subj":"T124","pred":"source","obj":"LitCovid-sentences"},{"subj":"T125","pred":"source","obj":"LitCovid-sentences"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#93ecd3","default":true},{"id":"LitCovid-PD-UBERON","color":"#ecb993"},{"id":"LitCovid-PD-MONDO","color":"#9f93ec"},{"id":"LitCovid-PD-CLO","color":"#a0ec93"},{"id":"LitCovid-PubTator","color":"#ec93ba"},{"id":"LitCovid-PD-HP","color":"#93d4ec"},{"id":"LitCovid-PD-GO-BP","color":"#ecea93"},{"id":"LitCovid-sentences","color":"#d093ec"}]}]}}