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PMC:7543426 / 6114-6769 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T39 78-82 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T40 162-166 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T41 167-174 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T33 78-82 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T34 162-166 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T53 64-72 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T87 78-82 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T88 78-82 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T89 162-166 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T90 162-166 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T91 253-256 http://purl.obolibrary.org/obo/CLO_0001387 denotes 4°C
T92 478-479 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T93 595-596 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T94 597-604 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digital

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
178 64-74 Species denotes SARS-CoV-2 Tax:2697049
179 196-210 Chemical denotes glutaraldehyde MESH:D005976
180 220-237 Chemical denotes cacodylate buffer
181 289-293 Chemical denotes OsO4
182 334-341 Chemical denotes ethanol MESH:D000431
183 444-458 Chemical denotes uranyl acetate MESH:C005460

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T52 0-32 Sentence denotes Transmission Electron Microscopy
T53 33-91 Sentence denotes We only looked for evidence of SARS-CoV-2 in lung samples.
T54 92-161 Sentence denotes Nonlung samples were not subject to transmission electron microscopy.
T55 162-257 Sentence denotes Lung tissues were fixed with 2.5% glutaraldehyde in 0.1 M cacodylate buffer for 4 hours at 4°C.
T56 258-294 Sentence denotes Fixation was performed with 1% OsO4.
T57 295-403 Sentence denotes Samples were then dehydrated in graded ethanol and embedded in Epon resin, as previously described [14, 15].
T58 404-568 Sentence denotes Ultrathin sections were stained with 2% uranyl acetate and examined under a transmission electron microscope (JEOL JEM 2100 Plus; Japan Electron Optics Laboratory).
T59 569-655 Sentence denotes Images were captured with a digital camera (Tietz Video and Image Processing Systems).

2_test

Id Subject Object Predicate Lexical cue
32914853-31217430-61098655 395-397 31217430 denotes 14
32914853-24813622-61098656 399-401 24813622 denotes 15