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PMC:7543426 / 19721-20437 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T201 0-6 Body_part denotes Spleen http://purl.org/sig/ont/fma/fma7196
T202 12-19 Body_part denotes spleens http://purl.org/sig/ont/fma/fma7196
T203 94-105 Body_part denotes white pulps http://purl.org/sig/ont/fma/fma62805
T204 178-186 Body_part denotes red pulp http://purl.org/sig/ont/fma/fma15844
T205 247-253 Body_part denotes spleen http://purl.org/sig/ont/fma/fma7196
T206 258-269 Body_part denotes bone marrow http://purl.org/sig/ont/fma/fma9608
T207 271-273 Body_part denotes A1 http://purl.org/sig/ont/fma/fma66592
T208 278-280 Body_part denotes A2 http://purl.org/sig/ont/fma/fma66595
T209 328-338 Body_part denotes white pulp http://purl.org/sig/ont/fma/fma62805
T210 351-363 Body_part denotes Bone marrows http://purl.org/sig/ont/fma/fma9608
T211 364-370 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T212 410-421 Body_part denotes bone marrow http://purl.org/sig/ont/fma/fma9608
T213 434-443 Body_part denotes adipocyte http://purl.org/sig/ont/fma/fma63880
T214 457-470 Body_part denotes Megakaryocyte http://purl.org/sig/ont/fma/fma83555
T215 552-563 Body_part denotes Macrophages http://purl.org/sig/ont/fma/fma63261
T216 587-598 Body_part denotes bone marrow http://purl.org/sig/ont/fma/fma9608
T217 599-605 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T218 617-622 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T219 684-686 Body_part denotes A1 http://purl.org/sig/ont/fma/fma66592
T220 688-690 Body_part denotes A2 http://purl.org/sig/ont/fma/fma66595

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T104 0-6 Body_part denotes Spleen http://purl.obolibrary.org/obo/UBERON_0002106
T105 12-19 Body_part denotes spleens http://purl.obolibrary.org/obo/UBERON_0002106
T106 247-253 Body_part denotes spleen http://purl.obolibrary.org/obo/UBERON_0002106
T107 258-269 Body_part denotes bone marrow http://purl.obolibrary.org/obo/UBERON_0002371
T108 351-363 Body_part denotes Bone marrows http://purl.obolibrary.org/obo/UBERON_0002371
T109 364-370 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T110 410-421 Body_part denotes bone marrow http://purl.obolibrary.org/obo/UBERON_0002371
T111 587-598 Body_part denotes bone marrow http://purl.obolibrary.org/obo/UBERON_0002371
T112 599-605 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T113 672-677 Body_part denotes Scale http://purl.obolibrary.org/obo/UBERON_0002542

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T148 471-482 Disease denotes hyperplasia http://purl.obolibrary.org/obo/MONDO_0005043

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T306 0-6 http://purl.obolibrary.org/obo/UBERON_0002106 denotes Spleen
T307 12-19 http://purl.obolibrary.org/obo/UBERON_0002106 denotes spleens
T308 247-253 http://purl.obolibrary.org/obo/UBERON_0002106 denotes spleen
T309 258-262 http://purl.obolibrary.org/obo/UBERON_0002481 denotes bone
T310 278-280 http://purl.obolibrary.org/obo/CLO_0001562 denotes A2
T311 351-355 http://purl.obolibrary.org/obo/UBERON_0002481 denotes Bone
T312 410-414 http://purl.obolibrary.org/obo/UBERON_0002481 denotes bone
T313 434-443 http://purl.obolibrary.org/obo/CL_0000136 denotes adipocyte
T314 548-550 http://purl.obolibrary.org/obo/CLO_0051741 denotes C1
T315 565-569 http://purl.obolibrary.org/obo/PR_000002064 denotes CD68
T316 587-591 http://purl.obolibrary.org/obo/UBERON_0002481 denotes bone
T317 607-609 http://purl.obolibrary.org/obo/CLO_0002105 denotes C2
T318 607-609 http://purl.obolibrary.org/obo/CLO_0051742 denotes C2
T319 611-615 http://purl.obolibrary.org/obo/PR_000002064 denotes CD68
T320 617-622 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T321 688-690 http://purl.obolibrary.org/obo/CLO_0001562 denotes A2
T322 695-697 http://purl.obolibrary.org/obo/CLO_0002105 denotes C2
T323 695-697 http://purl.obolibrary.org/obo/CLO_0051742 denotes C2

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
514 27-35 Species denotes patients Tax:9606
515 143-162 Disease denotes lymphoid hypoplasia MESH:D008224
525 340-349 Gene denotes B1 and B2 Gene:28905
526 565-569 Gene denotes CD68 Gene:968
527 611-615 Gene denotes CD68 Gene:968
528 684-697 Gene denotes A1, A2, B2–C2 Gene:28874
529 519-522 Chemical denotes H&E
530 524-536 Chemical denotes haematoxylin MESH:D006416
531 541-546 Chemical denotes eosin MESH:D004801
532 282-301 Disease denotes Lymphoid hypoplasia MESH:D008224
533 471-482 Disease denotes hyperplasia MESH:D006965

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T71 646-662 Phenotype denotes hemophagocytosis http://purl.obolibrary.org/obo/HP_0012156

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T240 0-7 Sentence denotes Spleen.
T241 8-81 Sentence denotes The spleens of all patients had normal shape but reduced volume and size.
T242 82-222 Sentence denotes The splenic white pulps of all 4 of the group 2 cases showed lymphoid hypoplasia with congested red pulp (Figure 6A1 and 6A2), and Table 3).
T243 223-232 Sentence denotes Figure 6.
T244 234-270 Sentence denotes Histology of spleen and bone marrow.
T245 271-339 Sentence denotes A1 and A2, Lymphoid hypoplasia is visible in the splenic white pulp.
T246 340-456 Sentence denotes B1 and B2, Bone marrows tissue shows replacement of red hematopoietic bone marrow with yellow adipocyte-rich marrow.
T247 457-504 Sentence denotes Megakaryocyte hyperplasia is observed (arrows).
T248 505-547 Sentence denotes Abbreviation: H&E, haematoxylin and eosin.
T249 548-606 Sentence denotes C1, Macrophages (CD68+) are present in bone marrow tissue.
T250 607-671 Sentence denotes C2, CD68+ cells displaying features of hemophagocytosis (arrow).
T251 672-716 Sentence denotes Scale bars: A1, A2, B2–C2, 7 µm; B1, 100 µm.