PMC:7543426 / 19721-20437
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T201 | 0-6 | Body_part | denotes | Spleen | http://purl.org/sig/ont/fma/fma7196 |
T202 | 12-19 | Body_part | denotes | spleens | http://purl.org/sig/ont/fma/fma7196 |
T203 | 94-105 | Body_part | denotes | white pulps | http://purl.org/sig/ont/fma/fma62805 |
T204 | 178-186 | Body_part | denotes | red pulp | http://purl.org/sig/ont/fma/fma15844 |
T205 | 247-253 | Body_part | denotes | spleen | http://purl.org/sig/ont/fma/fma7196 |
T206 | 258-269 | Body_part | denotes | bone marrow | http://purl.org/sig/ont/fma/fma9608 |
T207 | 271-273 | Body_part | denotes | A1 | http://purl.org/sig/ont/fma/fma66592 |
T208 | 278-280 | Body_part | denotes | A2 | http://purl.org/sig/ont/fma/fma66595 |
T209 | 328-338 | Body_part | denotes | white pulp | http://purl.org/sig/ont/fma/fma62805 |
T210 | 351-363 | Body_part | denotes | Bone marrows | http://purl.org/sig/ont/fma/fma9608 |
T211 | 364-370 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
T212 | 410-421 | Body_part | denotes | bone marrow | http://purl.org/sig/ont/fma/fma9608 |
T213 | 434-443 | Body_part | denotes | adipocyte | http://purl.org/sig/ont/fma/fma63880 |
T214 | 457-470 | Body_part | denotes | Megakaryocyte | http://purl.org/sig/ont/fma/fma83555 |
T215 | 552-563 | Body_part | denotes | Macrophages | http://purl.org/sig/ont/fma/fma63261 |
T216 | 587-598 | Body_part | denotes | bone marrow | http://purl.org/sig/ont/fma/fma9608 |
T217 | 599-605 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
T218 | 617-622 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T219 | 684-686 | Body_part | denotes | A1 | http://purl.org/sig/ont/fma/fma66592 |
T220 | 688-690 | Body_part | denotes | A2 | http://purl.org/sig/ont/fma/fma66595 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T104 | 0-6 | Body_part | denotes | Spleen | http://purl.obolibrary.org/obo/UBERON_0002106 |
T105 | 12-19 | Body_part | denotes | spleens | http://purl.obolibrary.org/obo/UBERON_0002106 |
T106 | 247-253 | Body_part | denotes | spleen | http://purl.obolibrary.org/obo/UBERON_0002106 |
T107 | 258-269 | Body_part | denotes | bone marrow | http://purl.obolibrary.org/obo/UBERON_0002371 |
T108 | 351-363 | Body_part | denotes | Bone marrows | http://purl.obolibrary.org/obo/UBERON_0002371 |
T109 | 364-370 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
T110 | 410-421 | Body_part | denotes | bone marrow | http://purl.obolibrary.org/obo/UBERON_0002371 |
T111 | 587-598 | Body_part | denotes | bone marrow | http://purl.obolibrary.org/obo/UBERON_0002371 |
T112 | 599-605 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
T113 | 672-677 | Body_part | denotes | Scale | http://purl.obolibrary.org/obo/UBERON_0002542 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T148 | 471-482 | Disease | denotes | hyperplasia | http://purl.obolibrary.org/obo/MONDO_0005043 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T306 | 0-6 | http://purl.obolibrary.org/obo/UBERON_0002106 | denotes | Spleen |
T307 | 12-19 | http://purl.obolibrary.org/obo/UBERON_0002106 | denotes | spleens |
T308 | 247-253 | http://purl.obolibrary.org/obo/UBERON_0002106 | denotes | spleen |
T309 | 258-262 | http://purl.obolibrary.org/obo/UBERON_0002481 | denotes | bone |
T310 | 278-280 | http://purl.obolibrary.org/obo/CLO_0001562 | denotes | A2 |
T311 | 351-355 | http://purl.obolibrary.org/obo/UBERON_0002481 | denotes | Bone |
T312 | 410-414 | http://purl.obolibrary.org/obo/UBERON_0002481 | denotes | bone |
T313 | 434-443 | http://purl.obolibrary.org/obo/CL_0000136 | denotes | adipocyte |
T314 | 548-550 | http://purl.obolibrary.org/obo/CLO_0051741 | denotes | C1 |
T315 | 565-569 | http://purl.obolibrary.org/obo/PR_000002064 | denotes | CD68 |
T316 | 587-591 | http://purl.obolibrary.org/obo/UBERON_0002481 | denotes | bone |
T317 | 607-609 | http://purl.obolibrary.org/obo/CLO_0002105 | denotes | C2 |
T318 | 607-609 | http://purl.obolibrary.org/obo/CLO_0051742 | denotes | C2 |
T319 | 611-615 | http://purl.obolibrary.org/obo/PR_000002064 | denotes | CD68 |
T320 | 617-622 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T321 | 688-690 | http://purl.obolibrary.org/obo/CLO_0001562 | denotes | A2 |
T322 | 695-697 | http://purl.obolibrary.org/obo/CLO_0002105 | denotes | C2 |
T323 | 695-697 | http://purl.obolibrary.org/obo/CLO_0051742 | denotes | C2 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
514 | 27-35 | Species | denotes | patients | Tax:9606 |
515 | 143-162 | Disease | denotes | lymphoid hypoplasia | MESH:D008224 |
525 | 340-349 | Gene | denotes | B1 and B2 | Gene:28905 |
526 | 565-569 | Gene | denotes | CD68 | Gene:968 |
527 | 611-615 | Gene | denotes | CD68 | Gene:968 |
528 | 684-697 | Gene | denotes | A1, A2, B2–C2 | Gene:28874 |
529 | 519-522 | Chemical | denotes | H&E | |
530 | 524-536 | Chemical | denotes | haematoxylin | MESH:D006416 |
531 | 541-546 | Chemical | denotes | eosin | MESH:D004801 |
532 | 282-301 | Disease | denotes | Lymphoid hypoplasia | MESH:D008224 |
533 | 471-482 | Disease | denotes | hyperplasia | MESH:D006965 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T71 | 646-662 | Phenotype | denotes | hemophagocytosis | http://purl.obolibrary.org/obo/HP_0012156 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T240 | 0-7 | Sentence | denotes | Spleen. |
T241 | 8-81 | Sentence | denotes | The spleens of all patients had normal shape but reduced volume and size. |
T242 | 82-222 | Sentence | denotes | The splenic white pulps of all 4 of the group 2 cases showed lymphoid hypoplasia with congested red pulp (Figure 6A1 and 6A2), and Table 3). |
T243 | 223-232 | Sentence | denotes | Figure 6. |
T244 | 234-270 | Sentence | denotes | Histology of spleen and bone marrow. |
T245 | 271-339 | Sentence | denotes | A1 and A2, Lymphoid hypoplasia is visible in the splenic white pulp. |
T246 | 340-456 | Sentence | denotes | B1 and B2, Bone marrows tissue shows replacement of red hematopoietic bone marrow with yellow adipocyte-rich marrow. |
T247 | 457-504 | Sentence | denotes | Megakaryocyte hyperplasia is observed (arrows). |
T248 | 505-547 | Sentence | denotes | Abbreviation: H&E, haematoxylin and eosin. |
T249 | 548-606 | Sentence | denotes | C1, Macrophages (CD68+) are present in bone marrow tissue. |
T250 | 607-671 | Sentence | denotes | C2, CD68+ cells displaying features of hemophagocytosis (arrow). |
T251 | 672-716 | Sentence | denotes | Scale bars: A1, A2, B2–C2, 7 µm; B1, 100 µm. |