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PMC:7543426 / 19200-19719 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T195 4-11 Body_part denotes kidneys http://purl.org/sig/ont/fma/fma7203
T196 237-265 Body_part denotes glomerular endothelial cells http://purl.org/sig/ont/fma/fma70970
T197 260-265 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T198 311-325 Body_part denotes Bowman capsule http://purl.org/sig/ont/fma/fma15626
T199 318-325 Body_part denotes capsule http://purl.org/sig/ont/fma/fma85272
T200 494-500 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T102 318-325 Body_part denotes capsule http://purl.obolibrary.org/obo/UBERON_0003893
T103 494-500 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T143 115-126 Disease denotes depressions http://purl.obolibrary.org/obo/MONDO_0002050
T144 369-381 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T145 399-419 Disease denotes glomerular sclerosis http://purl.obolibrary.org/obo/MONDO_0000490
T146 494-508 Disease denotes kidney disease http://purl.obolibrary.org/obo/MONDO_0001343|http://purl.obolibrary.org/obo/MONDO_0005240

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T297 4-11 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidneys
T298 4-11 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidneys
T299 4-11 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidneys
T300 248-265 http://purl.obolibrary.org/obo/CL_0000115 denotes endothelial cells
T301 442-445 http://purl.obolibrary.org/obo/CLO_0052942 denotes 5B4
T302 472-473 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T303 494-500 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T304 494-500 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T305 494-500 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
504 19-27 Species denotes patients Tax:9606
505 201-209 Species denotes patients Tax:9606
506 455-463 Species denotes patients Tax:9606
507 115-126 Disease denotes depressions MESH:D000275
508 173-181 Disease denotes fibrosis MESH:D005355
509 369-381 Disease denotes inflammation MESH:D007249
510 399-419 Disease denotes glomerular sclerosis MESH:D007674
511 494-508 Disease denotes kidney disease MESH:D007674

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T68 115-126 Phenotype denotes depressions http://purl.obolibrary.org/obo/HP_0000716
T69 399-419 Phenotype denotes glomerular sclerosis http://purl.obolibrary.org/obo/HP_0000096
T70 494-508 Phenotype denotes kidney disease http://purl.obolibrary.org/obo/HP_0000112

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T30 369-381 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T235 0-84 Sentence denotes The kidneys of all patients generally had normal shape with reduced volume and size.
T236 85-127 Sentence denotes Outer surfaces showed reddish depressions.
T237 128-266 Sentence denotes Histological examination showed interstitial fibrosis, mainly in group 2 patients (Figure 5B1), with swollen glomerular endothelial cells.
T238 267-339 Sentence denotes Fibrin deposits were visible underneath the Bowman capsule (Figure 5B2).
T239 340-519 Sentence denotes Chronic tubular-interstitial inflammation (Figure 5B3) and glomerular sclerosis were observed (Figure 5B4) even in patients without a history of previous kidney disease (Table 3).