PMC:7543325 / 15275-16109
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7543325","sourcedb":"PMC","sourceid":"7543325","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7543325","text":"In total, 2 of the 34 patients (5.88%) who underwent surgery during the COVID-19 pandemic were diagnosed with COVID-19. One of the 2 had thoracic trauma with multiple rib fractures and right haemothorax and required an emergency thoracotomy for damage control on 15 March. On the seventh postoperative day, the patient started showing symptoms of fever and pulmonary infiltrates on a CT scan, so he was tested with SARS-CoV-2 PCR, the results of which were positive; he was diagnosed with bilateral SARS-CoV-2 pneumonia. The course of the patient’s disease was difficult: he required a tracheostomy. As of this writing, the patient has been discharged from the intensive care unit but is still hospitalized. The results of the latest test for SARS-CoV-2 were negative; he has been decannulated, and he does not require oxygen therapy.","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T24","span":{"begin":167,"end":170},"obj":"Body_part"}],"attributes":[{"id":"A24","pred":"fma_id","subj":"T24","obj":"http://purl.org/sig/ont/fma/fma7574"},{"subj":"T24","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T25","span":{"begin":167,"end":170},"obj":"Body_part"}],"attributes":[{"id":"A25","pred":"uberon_id","subj":"T25","obj":"http://purl.obolibrary.org/obo/UBERON_0002228"},{"subj":"T25","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T127","span":{"begin":72,"end":80},"obj":"Disease"},{"id":"T128","span":{"begin":110,"end":118},"obj":"Disease"},{"id":"T129","span":{"begin":146,"end":152},"obj":"Disease"},{"id":"T130","span":{"begin":396,"end":398},"obj":"Disease"},{"id":"T131","span":{"begin":415,"end":423},"obj":"Disease"},{"id":"T132","span":{"begin":467,"end":469},"obj":"Disease"},{"id":"T133","span":{"begin":499,"end":507},"obj":"Disease"},{"id":"T134","span":{"begin":510,"end":519},"obj":"Disease"},{"id":"T135","span":{"begin":572,"end":574},"obj":"Disease"},{"id":"T136","span":{"begin":743,"end":751},"obj":"Disease"},{"id":"T137","span":{"begin":769,"end":771},"obj":"Disease"},{"id":"T138","span":{"begin":799,"end":801},"obj":"Disease"}],"attributes":[{"id":"A127","pred":"mondo_id","subj":"T127","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A128","pred":"mondo_id","subj":"T128","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A129","pred":"mondo_id","subj":"T129","obj":"http://purl.obolibrary.org/obo/MONDO_0021178"},{"id":"A130","pred":"mondo_id","subj":"T130","obj":"http://purl.obolibrary.org/obo/MONDO_0017319"},{"id":"A131","pred":"mondo_id","subj":"T131","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A132","pred":"mondo_id","subj":"T132","obj":"http://purl.obolibrary.org/obo/MONDO_0017319"},{"id":"A133","pred":"mondo_id","subj":"T133","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A134","pred":"mondo_id","subj":"T134","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A135","pred":"mondo_id","subj":"T135","obj":"http://purl.obolibrary.org/obo/MONDO_0017319"},{"id":"A136","pred":"mondo_id","subj":"T136","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A137","pred":"mondo_id","subj":"T137","obj":"http://purl.obolibrary.org/obo/MONDO_0017319"},{"id":"A138","pred":"mondo_id","subj":"T138","obj":"http://purl.obolibrary.org/obo/MONDO_0017319"},{"subj":"T127","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T128","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T129","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T130","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T131","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T132","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T133","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T134","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T135","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T136","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T137","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T138","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T127","span":{"begin":19,"end":21},"obj":"http://purl.obolibrary.org/obo/CLO_0001302"},{"id":"T128","span":{"begin":167,"end":170},"obj":"http://purl.obolibrary.org/obo/UBERON_0002228"},{"id":"T129","span":{"begin":382,"end":383},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T130","span":{"begin":403,"end":409},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T131","span":{"begin":584,"end":585},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T132","span":{"begin":632,"end":635},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T133","span":{"begin":734,"end":738},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T134","span":{"begin":772,"end":775},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"}],"attributes":[{"subj":"T127","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T128","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T129","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T130","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T131","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T132","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T133","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T134","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T14","span":{"begin":819,"end":825},"obj":"Chemical"}],"attributes":[{"id":"A14","pred":"chebi_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/CHEBI_25805"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"374","span":{"begin":22,"end":30},"obj":"Species"},{"id":"375","span":{"begin":311,"end":318},"obj":"Species"},{"id":"376","span":{"begin":415,"end":425},"obj":"Species"},{"id":"377","span":{"begin":539,"end":546},"obj":"Species"},{"id":"378","span":{"begin":624,"end":631},"obj":"Species"},{"id":"379","span":{"begin":743,"end":753},"obj":"Species"},{"id":"380","span":{"begin":819,"end":825},"obj":"Chemical"},{"id":"381","span":{"begin":72,"end":80},"obj":"Disease"},{"id":"382","span":{"begin":110,"end":118},"obj":"Disease"},{"id":"383","span":{"begin":146,"end":152},"obj":"Disease"},{"id":"384","span":{"begin":171,"end":202},"obj":"Disease"},{"id":"385","span":{"begin":347,"end":352},"obj":"Disease"},{"id":"386","span":{"begin":357,"end":378},"obj":"Disease"},{"id":"387","span":{"begin":504,"end":519},"obj":"Disease"}],"attributes":[{"id":"A374","pred":"tao:has_database_id","subj":"374","obj":"Tax:9606"},{"id":"A375","pred":"tao:has_database_id","subj":"375","obj":"Tax:9606"},{"id":"A376","pred":"tao:has_database_id","subj":"376","obj":"Tax:2697049"},{"id":"A377","pred":"tao:has_database_id","subj":"377","obj":"Tax:9606"},{"id":"A378","pred":"tao:has_database_id","subj":"378","obj":"Tax:9606"},{"id":"A379","pred":"tao:has_database_id","subj":"379","obj":"Tax:2697049"},{"id":"A380","pred":"tao:has_database_id","subj":"380","obj":"MESH:D010100"},{"id":"A381","pred":"tao:has_database_id","subj":"381","obj":"MESH:C000657245"},{"id":"A382","pred":"tao:has_database_id","subj":"382","obj":"MESH:C000657245"},{"id":"A383","pred":"tao:has_database_id","subj":"383","obj":"MESH:D014947"},{"id":"A384","pred":"tao:has_database_id","subj":"384","obj":"MESH:D050723"},{"id":"A385","pred":"tao:has_database_id","subj":"385","obj":"MESH:D005334"},{"id":"A386","pred":"tao:has_database_id","subj":"386","obj":"MESH:D017254"},{"id":"A387","pred":"tao:has_database_id","subj":"387","obj":"MESH:C000657245"},{"subj":"374","pred":"source","obj":"LitCovid-PubTator"},{"subj":"375","pred":"source","obj":"LitCovid-PubTator"},{"subj":"376","pred":"source","obj":"LitCovid-PubTator"},{"subj":"377","pred":"source","obj":"LitCovid-PubTator"},{"subj":"378","pred":"source","obj":"LitCovid-PubTator"},{"subj":"379","pred":"source","obj":"LitCovid-PubTator"},{"subj":"380","pred":"source","obj":"LitCovid-PubTator"},{"subj":"381","pred":"source","obj":"LitCovid-PubTator"},{"subj":"382","pred":"source","obj":"LitCovid-PubTator"},{"subj":"383","pred":"source","obj":"LitCovid-PubTator"},{"subj":"384","pred":"source","obj":"LitCovid-PubTator"},{"subj":"385","pred":"source","obj":"LitCovid-PubTator"},{"subj":"386","pred":"source","obj":"LitCovid-PubTator"},{"subj":"387","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T46","span":{"begin":158,"end":180},"obj":"Phenotype"},{"id":"T47","span":{"begin":347,"end":352},"obj":"Phenotype"},{"id":"T48","span":{"begin":357,"end":378},"obj":"Phenotype"},{"id":"T49","span":{"begin":510,"end":519},"obj":"Phenotype"}],"attributes":[{"id":"A46","pred":"hp_id","subj":"T46","obj":"http://purl.obolibrary.org/obo/HP_0006640"},{"id":"A47","pred":"hp_id","subj":"T47","obj":"http://purl.obolibrary.org/obo/HP_0001945"},{"id":"A48","pred":"hp_id","subj":"T48","obj":"http://purl.obolibrary.org/obo/HP_0002113"},{"id":"A49","pred":"hp_id","subj":"T49","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"subj":"T46","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T47","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T48","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T49","pred":"source","obj":"LitCovid-PD-HP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T163","span":{"begin":0,"end":119},"obj":"Sentence"},{"id":"T164","span":{"begin":120,"end":272},"obj":"Sentence"},{"id":"T165","span":{"begin":273,"end":520},"obj":"Sentence"},{"id":"T166","span":{"begin":521,"end":599},"obj":"Sentence"},{"id":"T167","span":{"begin":600,"end":707},"obj":"Sentence"},{"id":"T168","span":{"begin":708,"end":834},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T163","pred":"source","obj":"LitCovid-sentences"},{"subj":"T164","pred":"source","obj":"LitCovid-sentences"},{"subj":"T165","pred":"source","obj":"LitCovid-sentences"},{"subj":"T166","pred":"source","obj":"LitCovid-sentences"},{"subj":"T167","pred":"source","obj":"LitCovid-sentences"},{"subj":"T168","pred":"source","obj":"LitCovid-sentences"}]},{"project":"testtesttest","denotations":[{"id":"T30","span":{"begin":167,"end":170},"obj":"Body_part"}],"attributes":[{"id":"A30","pred":"uberon_id","subj":"T30","obj":"http://purl.obolibrary.org/obo/UBERON_0002228"},{"subj":"T30","pred":"source","obj":"testtesttest"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#ec93c4","default":true},{"id":"LitCovid-PD-UBERON","color":"#93deec"},{"id":"LitCovid-PD-MONDO","color":"#ece093"},{"id":"LitCovid-PD-CLO","color":"#c593ec"},{"id":"LitCovid-PD-CHEBI","color":"#93ecab"},{"id":"LitCovid-PubTator","color":"#ec9394"},{"id":"LitCovid-PD-HP","color":"#93aeec"},{"id":"LitCovid-sentences","color":"#c8ec93"},{"id":"testtesttest","color":"#ec93e2"}]}]}}