PMC:7543325 / 11920-13590 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T18","span":{"begin":559,"end":563},"obj":"Body_part"},{"id":"T19","span":{"begin":1527,"end":1533},"obj":"Body_part"}],"attributes":[{"id":"A18","pred":"fma_id","subj":"T18","obj":"http://purl.org/sig/ont/fma/fma7195"},{"id":"A19","pred":"fma_id","subj":"T19","obj":"http://purl.org/sig/ont/fma/fma7203"}],"text":"Table 3: Outcomes of postoperative patients during the COVID-19 pandemic\nProcedure N (%) Period Hospitalization (days) Postoperative complicationsa Deathsb\nPrescreening period Post-screening period\n1–19 March 20 March– 5 April Diagnostic PCR COVID-19 6–24 April Screening PCR COVID-19 Diagnostic PCR COVID-19 Yes Type T COVID+\nTotal % 34 22 (65%) 2 (6%) (−) (+) 10 (29%) All negative 4.72 4 2 1\nElective surgery Mediastinoscopy 4 (12) 2 0 2 2 1 0 0 0\nPleural biopsy 2 (6) 1 0 1 1 5.5 1 Bleeding 1 0\nLung biopsy 2 (6) 2 0 0 0 4 0 0 0\nWedge segmentectomy 8 (24) 7 0 1 (9 days)c 1 1 3.9 1 AKI 1 1\nAnatomical sublobar resection 1 (3) 1 0 0 0 None 3 0 0 0\nAnatomical lobectomy 11 (32) 6 0 5 5 5.3 1 AF 0 0\nExtrapleural pneumonectomy 1 (3) 1 0 0 0 8 0 0 0\nUrgent surgeryd Bullectomy 3 (9) 1 2 1 0 0 8.3 0 0 0\nEmergency surgerye Thoracic trauma damage control 1 (3) 1 0 1 (7 days)c 0 0 (−)f 1 Pneumonia 0 0\nMediastinitis 1 (3) 0 0 1 1 (−)f 0 0 0\na Early postoperative complications during hospitalization.\nb Mortality within 30 days after surgery was divided in T (total mortality) and COVID+ (mortality due to COVID-19).\nc Days after surgery PCR SARS-CoV-2 test results were positive.\nd Urgent surgery: not life-threatening.\ne Emergency surgery: life-threatening.\nf Still hospitalized at the writing of this article.\nAF: atrial fibrillation; AKI: acute kidney injury; COVID-19: coronavirus disease 2019; PCR: polymerase chain reaction; SARS-CoV-2: severe acute respiratory syndrome coronavirus 2."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T19","span":{"begin":559,"end":563},"obj":"Body_part"},{"id":"T20","span":{"begin":1527,"end":1533},"obj":"Body_part"}],"attributes":[{"id":"A19","pred":"uberon_id","subj":"T19","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A20","pred":"uberon_id","subj":"T20","obj":"http://purl.obolibrary.org/obo/UBERON_0002113"}],"text":"Table 3: Outcomes of postoperative patients during the COVID-19 pandemic\nProcedure N (%) Period Hospitalization (days) Postoperative complicationsa Deathsb\nPrescreening period Post-screening period\n1–19 March 20 March– 5 April Diagnostic PCR COVID-19 6–24 April Screening PCR COVID-19 Diagnostic PCR COVID-19 Yes Type T COVID+\nTotal % 34 22 (65%) 2 (6%) (−) (+) 10 (29%) All negative 4.72 4 2 1\nElective surgery Mediastinoscopy 4 (12) 2 0 2 2 1 0 0 0\nPleural biopsy 2 (6) 1 0 1 1 5.5 1 Bleeding 1 0\nLung biopsy 2 (6) 2 0 0 0 4 0 0 0\nWedge segmentectomy 8 (24) 7 0 1 (9 days)c 1 1 3.9 1 AKI 1 1\nAnatomical sublobar resection 1 (3) 1 0 0 0 None 3 0 0 0\nAnatomical lobectomy 11 (32) 6 0 5 5 5.3 1 AF 0 0\nExtrapleural pneumonectomy 1 (3) 1 0 0 0 8 0 0 0\nUrgent surgeryd Bullectomy 3 (9) 1 2 1 0 0 8.3 0 0 0\nEmergency surgerye Thoracic trauma damage control 1 (3) 1 0 1 (7 days)c 0 0 (−)f 1 Pneumonia 0 0\nMediastinitis 1 (3) 0 0 1 1 (−)f 0 0 0\na Early postoperative complications during hospitalization.\nb Mortality within 30 days after surgery was divided in T (total mortality) and COVID+ (mortality due to COVID-19).\nc Days after surgery PCR SARS-CoV-2 test results were positive.\nd Urgent surgery: not life-threatening.\ne Emergency surgery: life-threatening.\nf Still hospitalized at the writing of this article.\nAF: atrial fibrillation; AKI: acute kidney injury; COVID-19: coronavirus disease 2019; PCR: polymerase chain reaction; SARS-CoV-2: severe acute respiratory syndrome coronavirus 2."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T97","span":{"begin":56,"end":64},"obj":"Disease"},{"id":"T98","span":{"begin":252,"end":260},"obj":"Disease"},{"id":"T99","span":{"begin":288,"end":296},"obj":"Disease"},{"id":"T100","span":{"begin":313,"end":321},"obj":"Disease"},{"id":"T101","span":{"begin":672,"end":675},"obj":"Disease"},{"id":"T102","span":{"begin":977,"end":983},"obj":"Disease"},{"id":"T103","span":{"begin":1044,"end":1053},"obj":"Disease"},{"id":"T104","span":{"begin":1060,"end":1073},"obj":"Disease"},{"id":"T105","span":{"begin":1280,"end":1288},"obj":"Disease"},{"id":"T106","span":{"begin":1317,"end":1325},"obj":"Disease"},{"id":"T107","span":{"begin":1495,"end":1514},"obj":"Disease"},{"id":"T108","span":{"begin":1516,"end":1519},"obj":"Disease"},{"id":"T109","span":{"begin":1521,"end":1540},"obj":"Disease"},{"id":"T110","span":{"begin":1534,"end":1540},"obj":"Disease"},{"id":"T111","span":{"begin":1542,"end":1550},"obj":"Disease"},{"id":"T112","span":{"begin":1552,"end":1576},"obj":"Disease"},{"id":"T113","span":{"begin":1610,"end":1618},"obj":"Disease"},{"id":"T114","span":{"begin":1622,"end":1669},"obj":"Disease"},{"id":"T115","span":{"begin":1622,"end":1655},"obj":"Disease"}],"attributes":[{"id":"A97","pred":"mondo_id","subj":"T97","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A98","pred":"mondo_id","subj":"T98","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A99","pred":"mondo_id","subj":"T99","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A100","pred":"mondo_id","subj":"T100","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A101","pred":"mondo_id","subj":"T101","obj":"http://purl.obolibrary.org/obo/MONDO_0002492"},{"id":"A102","pred":"mondo_id","subj":"T102","obj":"http://purl.obolibrary.org/obo/MONDO_0021178"},{"id":"A103","pred":"mondo_id","subj":"T103","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A104","pred":"mondo_id","subj":"T104","obj":"http://purl.obolibrary.org/obo/MONDO_0004492"},{"id":"A105","pred":"mondo_id","subj":"T105","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A106","pred":"mondo_id","subj":"T106","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A107","pred":"mondo_id","subj":"T107","obj":"http://purl.obolibrary.org/obo/MONDO_0004981"},{"id":"A108","pred":"mondo_id","subj":"T108","obj":"http://purl.obolibrary.org/obo/MONDO_0002492"},{"id":"A109","pred":"mondo_id","subj":"T109","obj":"http://purl.obolibrary.org/obo/MONDO_0002492"},{"id":"A110","pred":"mondo_id","subj":"T110","obj":"http://purl.obolibrary.org/obo/MONDO_0021178"},{"id":"A111","pred":"mondo_id","subj":"T111","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A112","pred":"mondo_id","subj":"T112","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A113","pred":"mondo_id","subj":"T113","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A114","pred":"mondo_id","subj":"T114","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A115","pred":"mondo_id","subj":"T115","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"Table 3: Outcomes of postoperative patients during the COVID-19 pandemic\nProcedure N (%) Period Hospitalization (days) Postoperative complicationsa Deathsb\nPrescreening period Post-screening period\n1–19 March 20 March– 5 April Diagnostic PCR COVID-19 6–24 April Screening PCR COVID-19 Diagnostic PCR COVID-19 Yes Type T COVID+\nTotal % 34 22 (65%) 2 (6%) (−) (+) 10 (29%) All negative 4.72 4 2 1\nElective surgery Mediastinoscopy 4 (12) 2 0 2 2 1 0 0 0\nPleural biopsy 2 (6) 1 0 1 1 5.5 1 Bleeding 1 0\nLung biopsy 2 (6) 2 0 0 0 4 0 0 0\nWedge segmentectomy 8 (24) 7 0 1 (9 days)c 1 1 3.9 1 AKI 1 1\nAnatomical sublobar resection 1 (3) 1 0 0 0 None 3 0 0 0\nAnatomical lobectomy 11 (32) 6 0 5 5 5.3 1 AF 0 0\nExtrapleural pneumonectomy 1 (3) 1 0 0 0 8 0 0 0\nUrgent surgeryd Bullectomy 3 (9) 1 2 1 0 0 8.3 0 0 0\nEmergency surgerye Thoracic trauma damage control 1 (3) 1 0 1 (7 days)c 0 0 (−)f 1 Pneumonia 0 0\nMediastinitis 1 (3) 0 0 1 1 (−)f 0 0 0\na Early postoperative complications during hospitalization.\nb Mortality within 30 days after surgery was divided in T (total mortality) and COVID+ (mortality due to COVID-19).\nc Days after surgery PCR SARS-CoV-2 test results were positive.\nd Urgent surgery: not life-threatening.\ne Emergency surgery: life-threatening.\nf Still hospitalized at the writing of this article.\nAF: atrial fibrillation; AKI: acute kidney injury; COVID-19: coronavirus disease 2019; PCR: polymerase chain reaction; SARS-CoV-2: severe acute respiratory syndrome coronavirus 2."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T99","span":{"begin":355,"end":357},"obj":"http://purl.obolibrary.org/obo/CLO_0001302"},{"id":"T100","span":{"begin":359,"end":361},"obj":"http://purl.obolibrary.org/obo/CLO_0050507"},{"id":"T101","span":{"begin":463,"end":469},"obj":"http://purl.obolibrary.org/obo/CLO_0001360"},{"id":"T102","span":{"begin":479,"end":483},"obj":"http://purl.obolibrary.org/obo/CLO_0050507"},{"id":"T103","span":{"begin":530,"end":534},"obj":"http://purl.obolibrary.org/obo/CLO_0053733"},{"id":"T104","span":{"begin":559,"end":563},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"T105","span":{"begin":559,"end":563},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"},{"id":"T106","span":{"begin":654,"end":658},"obj":"http://purl.obolibrary.org/obo/CLO_0051741"},{"id":"T107","span":{"begin":677,"end":681},"obj":"http://purl.obolibrary.org/obo/CLO_0053733"},{"id":"T108","span":{"begin":776,"end":778},"obj":"http://purl.obolibrary.org/obo/CLO_0053733"},{"id":"T109","span":{"begin":1038,"end":1042},"obj":"http://purl.obolibrary.org/obo/CLO_0002960"},{"id":"T110","span":{"begin":1091,"end":1095},"obj":"http://purl.obolibrary.org/obo/CLO_0053733"},{"id":"T111","span":{"begin":1113,"end":1114},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T112","span":{"begin":1174,"end":1175},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"},{"id":"T113","span":{"begin":1328,"end":1332},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T114","span":{"begin":1527,"end":1533},"obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"T115","span":{"begin":1527,"end":1533},"obj":"http://www.ebi.ac.uk/efo/EFO_0000927"},{"id":"T116","span":{"begin":1527,"end":1533},"obj":"http://www.ebi.ac.uk/efo/EFO_0000929"}],"text":"Table 3: Outcomes of postoperative patients during the COVID-19 pandemic\nProcedure N (%) Period Hospitalization (days) Postoperative complicationsa Deathsb\nPrescreening period Post-screening period\n1–19 March 20 March– 5 April Diagnostic PCR COVID-19 6–24 April Screening PCR COVID-19 Diagnostic PCR COVID-19 Yes Type T COVID+\nTotal % 34 22 (65%) 2 (6%) (−) (+) 10 (29%) All negative 4.72 4 2 1\nElective surgery Mediastinoscopy 4 (12) 2 0 2 2 1 0 0 0\nPleural biopsy 2 (6) 1 0 1 1 5.5 1 Bleeding 1 0\nLung biopsy 2 (6) 2 0 0 0 4 0 0 0\nWedge segmentectomy 8 (24) 7 0 1 (9 days)c 1 1 3.9 1 AKI 1 1\nAnatomical sublobar resection 1 (3) 1 0 0 0 None 3 0 0 0\nAnatomical lobectomy 11 (32) 6 0 5 5 5.3 1 AF 0 0\nExtrapleural pneumonectomy 1 (3) 1 0 0 0 8 0 0 0\nUrgent surgeryd Bullectomy 3 (9) 1 2 1 0 0 8.3 0 0 0\nEmergency surgerye Thoracic trauma damage control 1 (3) 1 0 1 (7 days)c 0 0 (−)f 1 Pneumonia 0 0\nMediastinitis 1 (3) 0 0 1 1 (−)f 0 0 0\na Early postoperative complications during hospitalization.\nb Mortality within 30 days after surgery was divided in T (total mortality) and COVID+ (mortality due to COVID-19).\nc Days after surgery PCR SARS-CoV-2 test results were positive.\nd Urgent surgery: not life-threatening.\ne Emergency surgery: life-threatening.\nf Still hospitalized at the writing of this article.\nAF: atrial fibrillation; AKI: acute kidney injury; COVID-19: coronavirus disease 2019; PCR: polymerase chain reaction; SARS-CoV-2: severe acute respiratory syndrome coronavirus 2."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T12","span":{"begin":808,"end":810},"obj":"Chemical"},{"id":"T13","span":{"begin":1491,"end":1493},"obj":"Chemical"}],"attributes":[{"id":"A12","pred":"chebi_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/CHEBI_73807"},{"id":"A13","pred":"chebi_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/CHEBI_73807"}],"text":"Table 3: Outcomes of postoperative patients during the COVID-19 pandemic\nProcedure N (%) Period Hospitalization (days) Postoperative complicationsa Deathsb\nPrescreening period Post-screening period\n1–19 March 20 March– 5 April Diagnostic PCR COVID-19 6–24 April Screening PCR COVID-19 Diagnostic PCR COVID-19 Yes Type T COVID+\nTotal % 34 22 (65%) 2 (6%) (−) (+) 10 (29%) All negative 4.72 4 2 1\nElective surgery Mediastinoscopy 4 (12) 2 0 2 2 1 0 0 0\nPleural biopsy 2 (6) 1 0 1 1 5.5 1 Bleeding 1 0\nLung biopsy 2 (6) 2 0 0 0 4 0 0 0\nWedge segmentectomy 8 (24) 7 0 1 (9 days)c 1 1 3.9 1 AKI 1 1\nAnatomical sublobar resection 1 (3) 1 0 0 0 None 3 0 0 0\nAnatomical lobectomy 11 (32) 6 0 5 5 5.3 1 AF 0 0\nExtrapleural pneumonectomy 1 (3) 1 0 0 0 8 0 0 0\nUrgent surgeryd Bullectomy 3 (9) 1 2 1 0 0 8.3 0 0 0\nEmergency surgerye Thoracic trauma damage control 1 (3) 1 0 1 (7 days)c 0 0 (−)f 1 Pneumonia 0 0\nMediastinitis 1 (3) 0 0 1 1 (−)f 0 0 0\na Early postoperative complications during hospitalization.\nb Mortality within 30 days after surgery was divided in T (total mortality) and COVID+ (mortality due to COVID-19).\nc Days after surgery PCR SARS-CoV-2 test results were positive.\nd Urgent surgery: not life-threatening.\ne Emergency surgery: life-threatening.\nf Still hospitalized at the writing of this article.\nAF: atrial fibrillation; AKI: acute kidney injury; COVID-19: coronavirus disease 2019; PCR: polymerase chain reaction; SARS-CoV-2: severe acute respiratory syndrome coronavirus 2."}

{"project":"LitCovid-PubTator","denotations":[{"id":"296","span":{"begin":252,"end":260},"obj":"Disease"},{"id":"297","span":{"begin":288,"end":296},"obj":"Disease"},{"id":"298","span":{"begin":313,"end":343},"obj":"Disease"},{"id":"299","span":{"begin":808,"end":810},"obj":"Disease"},{"id":"300","span":{"begin":977,"end":990},"obj":"Disease"},{"id":"301","span":{"begin":1044,"end":1053},"obj":"Disease"},{"id":"304","span":{"begin":36,"end":44},"obj":"Species"},{"id":"305","span":{"begin":56,"end":64},"obj":"Disease"},{"id":"311","span":{"begin":1177,"end":1186},"obj":"Disease"},{"id":"312","span":{"begin":1240,"end":1249},"obj":"Disease"},{"id":"313","span":{"begin":1255,"end":1260},"obj":"Disease"},{"id":"314","span":{"begin":1263,"end":1272},"obj":"Disease"},{"id":"315","span":{"begin":1280,"end":1288},"obj":"Disease"},{"id":"317","span":{"begin":1317,"end":1327},"obj":"Species"},{"id":"324","span":{"begin":1610,"end":1620},"obj":"Species"},{"id":"325","span":{"begin":1622,"end":1669},"obj":"Species"},{"id":"326","span":{"begin":1491,"end":1493},"obj":"Disease"},{"id":"327","span":{"begin":1495,"end":1514},"obj":"Disease"},{"id":"328","span":{"begin":1521,"end":1540},"obj":"Disease"},{"id":"329","span":{"begin":1552,"end":1576},"obj":"Disease"}],"attributes":[{"id":"A296","pred":"tao:has_database_id","subj":"296","obj":"MESH:C000657245"},{"id":"A297","pred":"tao:has_database_id","subj":"297","obj":"MESH:C000657245"},{"id":"A298","pred":"tao:has_database_id","subj":"298","obj":"MESH:C000657245"},{"id":"A299","pred":"tao:has_database_id","subj":"299","obj":"MESH:D001281"},{"id":"A300","pred":"tao:has_database_id","subj":"300","obj":"MESH:D014947"},{"id":"A301","pred":"tao:has_database_id","subj":"301","obj":"MESH:D011014"},{"id":"A304","pred":"tao:has_database_id","subj":"304","obj":"Tax:9606"},{"id":"A305","pred":"tao:has_database_id","subj":"305","obj":"MESH:C000657245"},{"id":"A311","pred":"tao:has_database_id","subj":"311","obj":"MESH:D003643"},{"id":"A312","pred":"tao:has_database_id","subj":"312","obj":"MESH:D003643"},{"id":"A313","pred":"tao:has_database_id","subj":"313","obj":"MESH:C000657245"},{"id":"A314","pred":"tao:has_database_id","subj":"314","obj":"MESH:D003643"},{"id":"A315","pred":"tao:has_database_id","subj":"315","obj":"MESH:C000657245"},{"id":"A317","pred":"tao:has_database_id","subj":"317","obj":"Tax:2697049"},{"id":"A324","pred":"tao:has_database_id","subj":"324","obj":"Tax:2697049"},{"id":"A325","pred":"tao:has_database_id","subj":"325","obj":"Tax:2697049"},{"id":"A326","pred":"tao:has_database_id","subj":"326","obj":"MESH:D001281"},{"id":"A327","pred":"tao:has_database_id","subj":"327","obj":"MESH:D001281"},{"id":"A328","pred":"tao:has_database_id","subj":"328","obj":"MESH:D058186"},{"id":"A329","pred":"tao:has_database_id","subj":"329","obj":"MESH:C000657245"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Table 3: Outcomes of postoperative patients during the COVID-19 pandemic\nProcedure N (%) Period Hospitalization (days) Postoperative complicationsa Deathsb\nPrescreening period Post-screening period\n1–19 March 20 March– 5 April Diagnostic PCR COVID-19 6–24 April Screening PCR COVID-19 Diagnostic PCR COVID-19 Yes Type T COVID+\nTotal % 34 22 (65%) 2 (6%) (−) (+) 10 (29%) All negative 4.72 4 2 1\nElective surgery Mediastinoscopy 4 (12) 2 0 2 2 1 0 0 0\nPleural biopsy 2 (6) 1 0 1 1 5.5 1 Bleeding 1 0\nLung biopsy 2 (6) 2 0 0 0 4 0 0 0\nWedge segmentectomy 8 (24) 7 0 1 (9 days)c 1 1 3.9 1 AKI 1 1\nAnatomical sublobar resection 1 (3) 1 0 0 0 None 3 0 0 0\nAnatomical lobectomy 11 (32) 6 0 5 5 5.3 1 AF 0 0\nExtrapleural pneumonectomy 1 (3) 1 0 0 0 8 0 0 0\nUrgent surgeryd Bullectomy 3 (9) 1 2 1 0 0 8.3 0 0 0\nEmergency surgerye Thoracic trauma damage control 1 (3) 1 0 1 (7 days)c 0 0 (−)f 1 Pneumonia 0 0\nMediastinitis 1 (3) 0 0 1 1 (−)f 0 0 0\na Early postoperative complications during hospitalization.\nb Mortality within 30 days after surgery was divided in T (total mortality) and COVID+ (mortality due to COVID-19).\nc Days after surgery PCR SARS-CoV-2 test results were positive.\nd Urgent surgery: not life-threatening.\ne Emergency surgery: life-threatening.\nf Still hospitalized at the writing of this article.\nAF: atrial fibrillation; AKI: acute kidney injury; COVID-19: coronavirus disease 2019; PCR: polymerase chain reaction; SARS-CoV-2: severe acute respiratory syndrome coronavirus 2."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T39","span":{"begin":1044,"end":1053},"obj":"Phenotype"},{"id":"T40","span":{"begin":1495,"end":1514},"obj":"Phenotype"},{"id":"T41","span":{"begin":1521,"end":1540},"obj":"Phenotype"}],"attributes":[{"id":"A39","pred":"hp_id","subj":"T39","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A40","pred":"hp_id","subj":"T40","obj":"http://purl.obolibrary.org/obo/HP_0005110"},{"id":"A41","pred":"hp_id","subj":"T41","obj":"http://purl.obolibrary.org/obo/HP_0001919"}],"text":"Table 3: Outcomes of postoperative patients during the COVID-19 pandemic\nProcedure N (%) Period Hospitalization (days) Postoperative complicationsa Deathsb\nPrescreening period Post-screening period\n1–19 March 20 March– 5 April Diagnostic PCR COVID-19 6–24 April Screening PCR COVID-19 Diagnostic PCR COVID-19 Yes Type T COVID+\nTotal % 34 22 (65%) 2 (6%) (−) (+) 10 (29%) All negative 4.72 4 2 1\nElective surgery Mediastinoscopy 4 (12) 2 0 2 2 1 0 0 0\nPleural biopsy 2 (6) 1 0 1 1 5.5 1 Bleeding 1 0\nLung biopsy 2 (6) 2 0 0 0 4 0 0 0\nWedge segmentectomy 8 (24) 7 0 1 (9 days)c 1 1 3.9 1 AKI 1 1\nAnatomical sublobar resection 1 (3) 1 0 0 0 None 3 0 0 0\nAnatomical lobectomy 11 (32) 6 0 5 5 5.3 1 AF 0 0\nExtrapleural pneumonectomy 1 (3) 1 0 0 0 8 0 0 0\nUrgent surgeryd Bullectomy 3 (9) 1 2 1 0 0 8.3 0 0 0\nEmergency surgerye Thoracic trauma damage control 1 (3) 1 0 1 (7 days)c 0 0 (−)f 1 Pneumonia 0 0\nMediastinitis 1 (3) 0 0 1 1 (−)f 0 0 0\na Early postoperative complications during hospitalization.\nb Mortality within 30 days after surgery was divided in T (total mortality) and COVID+ (mortality due to COVID-19).\nc Days after surgery PCR SARS-CoV-2 test results were positive.\nd Urgent surgery: not life-threatening.\ne Emergency surgery: life-threatening.\nf Still hospitalized at the writing of this article.\nAF: atrial fibrillation; AKI: acute kidney injury; COVID-19: coronavirus disease 2019; PCR: polymerase chain reaction; SARS-CoV-2: severe acute respiratory syndrome coronavirus 2."}

{"project":"LitCovid-sentences","denotations":[{"id":"T127","span":{"begin":0,"end":8},"obj":"Sentence"},{"id":"T128","span":{"begin":10,"end":73},"obj":"Sentence"},{"id":"T129","span":{"begin":74,"end":162},"obj":"Sentence"},{"id":"T130","span":{"begin":163,"end":205},"obj":"Sentence"},{"id":"T131","span":{"begin":206,"end":344},"obj":"Sentence"},{"id":"T132","span":{"begin":345,"end":426},"obj":"Sentence"},{"id":"T133","span":{"begin":427,"end":497},"obj":"Sentence"},{"id":"T134","span":{"begin":498,"end":558},"obj":"Sentence"},{"id":"T135","span":{"begin":559,"end":606},"obj":"Sentence"},{"id":"T136","span":{"begin":607,"end":681},"obj":"Sentence"},{"id":"T137","span":{"begin":682,"end":752},"obj":"Sentence"},{"id":"T138","span":{"begin":753,"end":816},"obj":"Sentence"},{"id":"T139","span":{"begin":817,"end":879},"obj":"Sentence"},{"id":"T140","span":{"begin":880,"end":947},"obj":"Sentence"},{"id":"T141","span":{"begin":948,"end":1059},"obj":"Sentence"},{"id":"T142","span":{"begin":1060,"end":1112},"obj":"Sentence"},{"id":"T143","span":{"begin":1113,"end":1173},"obj":"Sentence"},{"id":"T144","span":{"begin":1174,"end":1290},"obj":"Sentence"},{"id":"T145","span":{"begin":1291,"end":1355},"obj":"Sentence"},{"id":"T146","span":{"begin":1356,"end":1396},"obj":"Sentence"},{"id":"T147","span":{"begin":1397,"end":1436},"obj":"Sentence"},{"id":"T148","span":{"begin":1437,"end":1490},"obj":"Sentence"},{"id":"T149","span":{"begin":1491,"end":1670},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Table 3: Outcomes of postoperative patients during the COVID-19 pandemic\nProcedure N (%) Period Hospitalization (days) Postoperative complicationsa Deathsb\nPrescreening period Post-screening period\n1–19 March 20 March– 5 April Diagnostic PCR COVID-19 6–24 April Screening PCR COVID-19 Diagnostic PCR COVID-19 Yes Type T COVID+\nTotal % 34 22 (65%) 2 (6%) (−) (+) 10 (29%) All negative 4.72 4 2 1\nElective surgery Mediastinoscopy 4 (12) 2 0 2 2 1 0 0 0\nPleural biopsy 2 (6) 1 0 1 1 5.5 1 Bleeding 1 0\nLung biopsy 2 (6) 2 0 0 0 4 0 0 0\nWedge segmentectomy 8 (24) 7 0 1 (9 days)c 1 1 3.9 1 AKI 1 1\nAnatomical sublobar resection 1 (3) 1 0 0 0 None 3 0 0 0\nAnatomical lobectomy 11 (32) 6 0 5 5 5.3 1 AF 0 0\nExtrapleural pneumonectomy 1 (3) 1 0 0 0 8 0 0 0\nUrgent surgeryd Bullectomy 3 (9) 1 2 1 0 0 8.3 0 0 0\nEmergency surgerye Thoracic trauma damage control 1 (3) 1 0 1 (7 days)c 0 0 (−)f 1 Pneumonia 0 0\nMediastinitis 1 (3) 0 0 1 1 (−)f 0 0 0\na Early postoperative complications during hospitalization.\nb Mortality within 30 days after surgery was divided in T (total mortality) and COVID+ (mortality due to COVID-19).\nc Days after surgery PCR SARS-CoV-2 test results were positive.\nd Urgent surgery: not life-threatening.\ne Emergency surgery: life-threatening.\nf Still hospitalized at the writing of this article.\nAF: atrial fibrillation; AKI: acute kidney injury; COVID-19: coronavirus disease 2019; PCR: polymerase chain reaction; SARS-CoV-2: severe acute respiratory syndrome coronavirus 2."}

{"project":"testtesttest","denotations":[{"id":"T24","span":{"begin":559,"end":563},"obj":"Body_part"},{"id":"T25","span":{"begin":1527,"end":1533},"obj":"Body_part"}],"attributes":[{"id":"A24","pred":"uberon_id","subj":"T24","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A25","pred":"uberon_id","subj":"T25","obj":"http://purl.obolibrary.org/obo/UBERON_0002113"}],"text":"Table 3: Outcomes of postoperative patients during the COVID-19 pandemic\nProcedure N (%) Period Hospitalization (days) Postoperative complicationsa Deathsb\nPrescreening period Post-screening period\n1–19 March 20 March– 5 April Diagnostic PCR COVID-19 6–24 April Screening PCR COVID-19 Diagnostic PCR COVID-19 Yes Type T COVID+\nTotal % 34 22 (65%) 2 (6%) (−) (+) 10 (29%) All negative 4.72 4 2 1\nElective surgery Mediastinoscopy 4 (12) 2 0 2 2 1 0 0 0\nPleural biopsy 2 (6) 1 0 1 1 5.5 1 Bleeding 1 0\nLung biopsy 2 (6) 2 0 0 0 4 0 0 0\nWedge segmentectomy 8 (24) 7 0 1 (9 days)c 1 1 3.9 1 AKI 1 1\nAnatomical sublobar resection 1 (3) 1 0 0 0 None 3 0 0 0\nAnatomical lobectomy 11 (32) 6 0 5 5 5.3 1 AF 0 0\nExtrapleural pneumonectomy 1 (3) 1 0 0 0 8 0 0 0\nUrgent surgeryd Bullectomy 3 (9) 1 2 1 0 0 8.3 0 0 0\nEmergency surgerye Thoracic trauma damage control 1 (3) 1 0 1 (7 days)c 0 0 (−)f 1 Pneumonia 0 0\nMediastinitis 1 (3) 0 0 1 1 (−)f 0 0 0\na Early postoperative complications during hospitalization.\nb Mortality within 30 days after surgery was divided in T (total mortality) and COVID+ (mortality due to COVID-19).\nc Days after surgery PCR SARS-CoV-2 test results were positive.\nd Urgent surgery: not life-threatening.\ne Emergency surgery: life-threatening.\nf Still hospitalized at the writing of this article.\nAF: atrial fibrillation; AKI: acute kidney injury; COVID-19: coronavirus disease 2019; PCR: polymerase chain reaction; SARS-CoV-2: severe acute respiratory syndrome coronavirus 2."}