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PMC:7534795 / 64424-65935 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T259 114-123 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T260 125-135 Body_part denotes chemokines http://purl.org/sig/ont/fma/fma241981
T261 532-545 Body_part denotes cell membrane http://purl.org/sig/ont/fma/fma63841
T262 532-536 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T263 846-855 Body_part denotes Chemokine http://purl.org/sig/ont/fma/fma241981
T264 1033-1042 Body_part denotes G-protein http://purl.org/sig/ont/fma/fma61788
T265 1065-1076 Body_part denotes Interleukin http://purl.org/sig/ont/fma/fma86578
T266 1137-1147 Body_part denotes fatty acid http://purl.org/sig/ont/fma/fma82738
T267 1209-1214 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T268 1261-1268 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T269 1292-1294 Body_part denotes A2 http://purl.org/sig/ont/fma/fma66595
T270 1319-1330 Body_part denotes neutrophils http://purl.org/sig/ont/fma/fma62860
T271 1338-1348 Body_part denotes Peroxisome http://purl.org/sig/ont/fma/fma63845

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T434 1487-1492 Disease denotes Tumor http://purl.obolibrary.org/obo/MONDO_0005070

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T383 0-1 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T384 61-62 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T385 189-197 http://purl.obolibrary.org/obo/CLO_0001658 denotes activate
T386 252-260 http://purl.obolibrary.org/obo/CLO_0001658 denotes activate
T387 306-316 http://purl.obolibrary.org/obo/CLO_0001658 denotes activation
T388 324-330 http://purl.obolibrary.org/obo/CLO_0001869 denotes B. (B)
T389 472-474 http://purl.obolibrary.org/obo/CLO_0001627 denotes AA
T390 532-536 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T391 537-545 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T392 581-590 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T393 718-723 http://purl.obolibrary.org/obo/CLO_0037161 denotes (E) N
T394 819-821 http://purl.obolibrary.org/obo/CLO_0001627 denotes AA
T395 1033-1059 http://purl.obolibrary.org/obo/PR_000030035 denotes G-protein coupled receptor
T396 1097-1099 http://purl.obolibrary.org/obo/CLO_0007408 denotes LT
T397 1152-1153 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T398 1197-1206 http://purl.obolibrary.org/obo/CLO_0001658 denotes activated
T399 1207-1214 http://purl.obolibrary.org/obo/CL_0000236 denotes B-cells
T400 1292-1294 http://purl.obolibrary.org/obo/CLO_0001562 denotes A2
T401 1362-1371 http://purl.obolibrary.org/obo/CLO_0001658 denotes activated

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T91966 53-58 Chemical denotes PUFAs http://purl.obolibrary.org/obo/CHEBI_26208
T254 68-73 Chemical denotes PUFAs http://purl.obolibrary.org/obo/CHEBI_26208
T25762 149-158 Chemical denotes molecules http://purl.obolibrary.org/obo/CHEBI_25367
T2516 320-322 Chemical denotes NF http://purl.obolibrary.org/obo/CHEBI_141424|http://purl.obolibrary.org/obo/CHEBI_25573|http://purl.obolibrary.org/obo/CHEBI_1224
T90528 335-340 Chemical denotes PUFAs http://purl.obolibrary.org/obo/CHEBI_26208
T92881 384-387 Chemical denotes LTs http://purl.obolibrary.org/obo/CHEBI_25029
T67923 435-440 Chemical denotes PUFAs http://purl.obolibrary.org/obo/CHEBI_26208
T52402 457-462 Chemical denotes PUFAs http://purl.obolibrary.org/obo/CHEBI_26208
T263 472-474 Chemical denotes AA http://purl.obolibrary.org/obo/CHEBI_15843|http://purl.obolibrary.org/obo/CHEBI_72816
T265 516-520 Chemical denotes PUFA http://purl.obolibrary.org/obo/CHEBI_26208|http://purl.obolibrary.org/obo/CHEBI_76567
T41515 600-605 Chemical denotes PUFAs http://purl.obolibrary.org/obo/CHEBI_26208
T49437 607-610 Chemical denotes DHA http://purl.obolibrary.org/obo/CHEBI_16016|http://purl.obolibrary.org/obo/CHEBI_28125|http://purl.obolibrary.org/obo/CHEBI_28689|http://purl.obolibrary.org/obo/CHEBI_36005
T8273 615-618 Chemical denotes EPA http://purl.obolibrary.org/obo/CHEBI_28364
T273 639-642 Chemical denotes CYP http://purl.obolibrary.org/obo/CHEBI_38559
T15459 726-731 Chemical denotes PUFAs http://purl.obolibrary.org/obo/CHEBI_26208
T98235 764-768 Chemical denotes SPMs http://purl.obolibrary.org/obo/CHEBI_140399
T61651 819-821 Chemical denotes AA http://purl.obolibrary.org/obo/CHEBI_15843|http://purl.obolibrary.org/obo/CHEBI_72816
T10468 823-839 Chemical denotes Arachidonic acid http://purl.obolibrary.org/obo/CHEBI_15843
T33326 835-839 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T93741 841-844 Chemical denotes CCL http://purl.obolibrary.org/obo/CHEBI_3478
T49022 856-862 Chemical denotes ligand http://purl.obolibrary.org/obo/CHEBI_52214
T32999 885-888 Chemical denotes CYP http://purl.obolibrary.org/obo/CHEBI_38559
T44466 890-900 Chemical denotes Cytochrome http://purl.obolibrary.org/obo/CHEBI_4056
T12742 907-910 Chemical denotes DHA http://purl.obolibrary.org/obo/CHEBI_16016|http://purl.obolibrary.org/obo/CHEBI_28125|http://purl.obolibrary.org/obo/CHEBI_28689|http://purl.obolibrary.org/obo/CHEBI_36005
T92319 912-932 Chemical denotes Docosahexaenoic acid http://purl.obolibrary.org/obo/CHEBI_28125
T3064 928-932 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T14197 939-965 Chemical denotes Epoxydocosapentaenoic acid http://purl.obolibrary.org/obo/CHEBI_72654
T66732 961-965 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T292 967-970 Chemical denotes EEQ http://purl.obolibrary.org/obo/CHEBI_144559|http://purl.obolibrary.org/obo/CHEBI_72852
T45166 972-998 Chemical denotes Epoxyeicosatetraenoic acid http://purl.obolibrary.org/obo/CHEBI_72852
T89769 994-998 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T46951 1000-1003 Chemical denotes EPA http://purl.obolibrary.org/obo/CHEBI_28364
T32094 1005-1026 Chemical denotes Eicosapentaenoic acid http://purl.obolibrary.org/obo/CHEBI_28364
T89321 1022-1026 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T33506 1028-1031 Chemical denotes GRP http://purl.obolibrary.org/obo/CHEBI_144473|http://purl.obolibrary.org/obo/CHEBI_80328
T56126 1035-1042 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T51846 1061-1063 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T77398 1097-1099 Chemical denotes LT http://purl.obolibrary.org/obo/CHEBI_73589
T305 1101-1112 Chemical denotes Leukotriene http://purl.obolibrary.org/obo/CHEBI_25029
T306 1114-1118 Chemical denotes PUFA http://purl.obolibrary.org/obo/CHEBI_26208|http://purl.obolibrary.org/obo/CHEBI_76567
T47314 1125-1147 Chemical denotes unsaturated fatty acid http://purl.obolibrary.org/obo/CHEBI_27208
T64064 1137-1147 Chemical denotes fatty acid http://purl.obolibrary.org/obo/CHEBI_35366
T11513 1143-1147 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T26774 1149-1151 Chemical denotes NF http://purl.obolibrary.org/obo/CHEBI_141424|http://purl.obolibrary.org/obo/CHEBI_25573|http://purl.obolibrary.org/obo/CHEBI_1224
T12903 1261-1268 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T14656 1382-1385 Chemical denotes ROS http://purl.obolibrary.org/obo/CHEBI_26523
T89630 1387-1410 Chemical denotes Reactive oxygen species http://purl.obolibrary.org/obo/CHEBI_26523
T21274 1396-1402 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T1686 1412-1416 Chemical denotes SPMs http://purl.obolibrary.org/obo/CHEBI_140399
T80333 1418-1453 Chemical denotes Specialized pro-resolving mediators http://purl.obolibrary.org/obo/CHEBI_140399

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T119 160-197 http://purl.obolibrary.org/obo/GO_1900226 denotes inhibit NLRP3 inflammasomes, activate
T120 168-197 http://purl.obolibrary.org/obo/GO_0044546 denotes NLRP3 inflammasomes, activate
T121 216-237 http://purl.obolibrary.org/obo/GO_0000981 denotes transcription factors
T122 216-229 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T123 489-510 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammatory response
T124 581-590 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T125 890-900 http://purl.obolibrary.org/obo/GO_0045158 denotes Cytochrome
T126 890-900 http://purl.obolibrary.org/obo/GO_0045157 denotes Cytochrome
T127 890-900 http://purl.obolibrary.org/obo/GO_0045156 denotes Cytochrome
T128 890-900 http://purl.obolibrary.org/obo/GO_0008121 denotes Cytochrome
T129 1338-1361 http://purl.obolibrary.org/obo/GO_0016559 denotes Peroxisome proliferator
T130 1493-1501 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T131 1493-1501 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T132 1493-1501 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis
T133 1493-1501 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T480 512-818 Sentence denotes N-3 PUFA will alter cell membrane composition, fluidity and mediated signaling. (D) N-3 PUFAs, DHA and EPA, are metabolized by CYP epoxygenases into bioactive epoxylipids with anti-inflammatory properties. (E) N-3 PUFAs are metabolized by COX/LOX into SPMs which act as potent anti-inflammatory modulators.
T481 819-1511 Sentence denotes AA, Arachidonic acid; CCL, Chemokine ligand; COX, Cyclooxygenase; CYP, Cytochrome P450; DHA, Docosahexaenoic acid; EDP, Epoxydocosapentaenoic acid; EEQ, Epoxyeicosatetraenoic acid; EPA, Eicosapentaenoic acid; GRP, G-protein coupled receptor; IL, Interleukin; LOX, Lipoxygenase; LT, Leukotriene; PUFA, Poly unsaturated fatty acid; NFκB, Nuclear factor kappa-light-chain enhancer activated B-cells; NLRP3, NACHT, LRR and PYD domains-containing protein 3; PLA2, Phospholipase A2; PMN, Polymorphonuclear neutrophils; PPAR, Peroxisome proliferator-activated receptor; ROS, Reactive oxygen species; SPMs, Specialized pro-resolving mediators; TLR, Toll like receptor; TNF-α, Tumor necrosis factor-α.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T205 1487-1492 Phenotype denotes Tumor http://purl.obolibrary.org/obo/HP_0002664

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1931 168-173 Gene denotes NLRP3 Gene:114548
1932 239-244 Gene denotes PPARα Gene:5465
1933 261-267 Gene denotes GPR120 Gene:338557
1934 292-296 Gene denotes TLR4 Gene:7099
1935 320-325 Gene denotes NF-κB Gene:4790
1936 885-888 Gene denotes CYP Gene:4051
1937 890-905 Gene denotes Cytochrome P450 Gene:4051
1938 1028-1031 Gene denotes GRP Gene:2922
1939 1114-1118 Gene denotes PUFA Gene:9933
1940 1216-1221 Gene denotes NLRP3 Gene:114548
1941 1223-1270 Gene denotes NACHT, LRR and PYD domains-containing protein 3 Gene:114548
1942 1272-1276 Gene denotes PLA2 Gene:5320
1943 1278-1294 Gene denotes Phospholipase A2 Gene:5319
1944 1332-1336 Gene denotes PPAR Gene:5465
1945 1480-1485 Gene denotes TNF-α Gene:7124
1946 1487-1510 Gene denotes Tumor necrosis factor-α Gene:7124
1947 516-520 Gene denotes PUFA Gene:9933
1948 639-642 Gene denotes CYP Gene:4051
1949 431-433 Chemical denotes N- MESH:D009584
1950 596-605 Chemical denotes N-3 PUFAs MESH:D015525
1951 607-610 Chemical denotes DHA MESH:D004281
1952 615-618 Chemical denotes EPA MESH:D015118
1953 722-731 Chemical denotes N-3 PUFAs MESH:D015525