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PMC:7534206 / 19401-20216 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T44 83-105 Body_part denotes central nervous system http://purl.org/sig/ont/fma/fma55675
T45 107-110 Body_part denotes CNS http://purl.org/sig/ont/fma/fma55675
T46 136-143 Body_part denotes neurons http://purl.org/sig/ont/fma/fma54527
T47 148-159 Body_part denotes glial cells http://purl.org/sig/ont/fma/fma54536
T48 154-159 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T49 331-345 Body_part denotes olfactory bulb http://purl.org/sig/ont/fma/fma77624
T50 365-369 Body_part denotes hand http://purl.org/sig/ont/fma/fma9712
T51 426-431 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T52 432-437 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T53 483-493 Body_part denotes leukocytes http://purl.org/sig/ont/fma/fma62852
T54 544-553 Body_part denotes monocytes http://purl.org/sig/ont/fma/fma62864
T55 554-565 Body_part denotes macrophages http://purl.org/sig/ont/fma/fma63261
T56 579-594 Body_part denotes dendritic cells http://purl.org/sig/ont/fma/fma273565
T57 589-594 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T58 646-663 Body_part denotes endothelial cells http://purl.org/sig/ont/fma/fma66772
T59 658-663 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T60 727-746 Body_part denotes cerebrospinal fluid http://purl.org/sig/ont/fma/fma20935

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T51 83-105 Body_part denotes central nervous system http://purl.obolibrary.org/obo/UBERON_0001017
T52 91-105 Body_part denotes nervous system http://purl.obolibrary.org/obo/UBERON_0001016
T53 107-110 Body_part denotes CNS http://purl.obolibrary.org/obo/UBERON_0001017
T54 331-345 Body_part denotes olfactory bulb http://purl.obolibrary.org/obo/UBERON_0002264
T55 365-369 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T56 426-445 Body_part denotes blood–brain barrier http://purl.obolibrary.org/obo/UBERON_0000120
T57 426-431 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T58 432-437 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T59 727-746 Body_part denotes cerebrospinal fluid http://purl.obolibrary.org/obo/UBERON_0001359

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T202 204-224 Disease denotes neurological disease http://purl.obolibrary.org/obo/MONDO_0005071
T203 685-693 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T204 750-758 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T213 33-40 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Viruses
T214 83-105 http://purl.obolibrary.org/obo/UBERON_0001017 denotes central nervous system
T215 83-105 http://www.ebi.ac.uk/efo/EFO_0000302 denotes central nervous system
T216 83-105 http://www.ebi.ac.uk/efo/EFO_0000908 denotes central nervous system
T217 107-110 http://www.ebi.ac.uk/efo/EFO_0000302 denotes CNS
T218 107-110 http://www.ebi.ac.uk/efo/EFO_0000908 denotes CNS
T219 107-110 http://purl.obolibrary.org/obo/UBERON_0001017 denotes CNS
T220 148-159 http://purl.obolibrary.org/obo/CL_0000125 denotes glial cells
T221 426-431 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T222 426-431 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T223 432-437 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T224 432-437 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T225 466-467 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T226 500-505 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T227 513-518 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T228 538-543 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T229 544-553 http://purl.obolibrary.org/obo/CL_0000576 denotes monocytes
T230 579-594 http://purl.obolibrary.org/obo/CL_0000451 denotes dendritic cells
T231 610-615 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T232 640-645 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T233 646-663 http://purl.obolibrary.org/obo/CL_0000115 denotes endothelial cells
T234 714-719 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T235 768-771 http://purl.obolibrary.org/obo/CLO_0051582 denotes has

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T90 245-251 Chemical denotes Access http://purl.obolibrary.org/obo/CHEBI_34922
T91 506-512 Chemical denotes corona http://purl.obolibrary.org/obo/CHEBI_37409

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T5 697-719 http://purl.obolibrary.org/obo/GO_0009597 denotes detection of the virus

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T195 0-32 Sentence denotes Neuroinvasion and neurovirulence
T196 33-815 Sentence denotes Viruses, including coronavirus, can penetrate the central nervous system (CNS) (neuroinvasion), infect neurons and glial cells (neurotropism), and contribute to, or cause neurological disease (neurovirulence).28 Access may be achieved via two main routes: hematogenous or transneuronal through the olfactory bulb.27,29 On the other hand, the hematogenous route involves directly infecting the blood–brain barrier (BBB) or access via a Trojan such as leukocytes.27,30 Human corona virus strains may infect human monocytes/macrophages,31,32 murine dendritic cells expressing the human aminopeptidase N,33 and human endothelial cells of the BBB.30 As for SARS-CoV-2, detection of the virus in the cerebrospinal fluid of COVID-19 patients has been reported in several publications.26,34

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
532 616-632 Gene denotes aminopeptidase N Gene:290
533 52-63 Species denotes coronavirus Tax:11118
534 500-505 Species denotes Human Tax:9606
535 506-518 Species denotes corona virus Tax:11118
536 538-543 Species denotes human Tax:9606
537 572-578 Species denotes murine Tax:10090
538 610-615 Species denotes human Tax:9606
539 640-645 Species denotes human Tax:9606
540 685-695 Species denotes SARS-CoV-2 Tax:2697049
541 759-767 Species denotes patients Tax:9606
542 204-224 Disease denotes neurological disease MESH:D020271
543 750-758 Disease denotes COVID-19 MESH:C000657245

2_test

Id Subject Object Predicate Lexical cue
32501751-20390431-53715189 242-244 20390431 denotes 28
32501751-24619619-53715190 346-348 24619619 denotes 27
32501751-24619619-53715191 494-496 24619619 denotes 27
32501751-17825937-53715192 497-499 17825937 denotes 30
32501751-17669539-53715193 566-568 17669539 denotes 31
32501751-12414783-53715194 569-571 12414783 denotes 32
32501751-15840518-53715195 633-635 15840518 denotes 33
32501751-17825937-53715196 675-677 17825937 denotes 30
32501751-32251791-53715197 810-812 32251791 denotes 26
T35848 242-244 20390431 denotes 28
T83186 346-348 24619619 denotes 27
T18286 494-496 24619619 denotes 27
T33219 497-499 17825937 denotes 30
T81705 566-568 17669539 denotes 31
T97949 569-571 12414783 denotes 32
T56487 633-635 15840518 denotes 33
T5106 675-677 17825937 denotes 30
T8155 810-812 32251791 denotes 26