PMC:7473770 / 9787-10865
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T44 | 41-45 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T45 | 102-108 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
| T46 | 609-613 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T47 | 1071-1077 | Body_part | denotes | radius | http://purl.org/sig/ont/fma/fma23463 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T38 | 41-45 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T39 | 102-108 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T40 | 457-463 | Body_part | denotes | scales | http://purl.obolibrary.org/obo/UBERON_0002542 |
| T41 | 609-613 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T81 | 41-45 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T82 | 41-45 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T83 | 100-101 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T84 | 609-613 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T85 | 609-613 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T50 | 0-99 | Sentence | denotes | In total, we investigated six postmortem lung samples from Covid-19 patients (Menter et al., 2020). |
| T51 | 100-222 | Sentence | denotes | A tissue micro-array paraffin block with samples of all six patients and the corresponding HE stain is shown in Figure 1a. |
| T52 | 223-364 | Sentence | denotes | Information about age, gender, hospitalization, clinical, radiological and histological characteristics of all patients are shown in Table 2. |
| T53 | 365-553 | Sentence | denotes | Before presenting the results for the six Covid-19 patients for each of the imaging levels (scales), we give an overview on the typical datasets for one exemplary sample (I), see Figure 2. |
| T54 | 554-765 | Sentence | denotes | The typical FOVs, image quality, and appearance of the lung structure as well as the amount of data can be inferred, and inspected in the reconstructions provided online (https://doi.org/10.5281/zenodo.3892637). |
| T55 | 766-821 | Sentence | denotes | The datasets are denoted by patient I-VI, respectively. |
| T56 | 822-1078 | Sentence | denotes | Gray values of the tomographic reconstruction represent phase shift per voxel with edge length vx, the local electron density difference to the average paraffin can be computed by(1) Δρe(r)=φvx(r)vx⋅λ⋅r0,with wavelength λ and r0 classical electron radius. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32815517-32364264-26997860 | 93-97 | 32364264 | denotes | 2020 |
MyTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32815517-32364264-26997860 | 93-97 | 32364264 | denotes | 2020 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 135 | 68-76 | Species | denotes | patients | Tax:9606 |
| 136 | 160-168 | Species | denotes | patients | Tax:9606 |
| 137 | 334-342 | Species | denotes | patients | Tax:9606 |
| 138 | 416-424 | Species | denotes | patients | Tax:9606 |
| 139 | 794-801 | Species | denotes | patient | Tax:9606 |
| 140 | 191-193 | Chemical | denotes | HE | |
| 141 | 975-983 | Chemical | denotes | paraffin | MESH:D010232 |
| 142 | 59-67 | Disease | denotes | Covid-19 | MESH:C000657245 |
| 143 | 407-415 | Disease | denotes | Covid-19 | MESH:C000657245 |