PMC:7473770 / 16042-16751 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T83","span":{"begin":48,"end":56},"obj":"Body_part"},{"id":"T84","span":{"begin":57,"end":67},"obj":"Body_part"},{"id":"T85","span":{"begin":80,"end":91},"obj":"Body_part"},{"id":"T86","span":{"begin":368,"end":380},"obj":"Body_part"},{"id":"T87","span":{"begin":496,"end":508},"obj":"Body_part"},{"id":"T88","span":{"begin":562,"end":568},"obj":"Body_part"},{"id":"T89","span":{"begin":620,"end":626},"obj":"Body_part"},{"id":"T90","span":{"begin":681,"end":686},"obj":"Body_part"}],"attributes":[{"id":"A83","pred":"fma_id","subj":"T83","obj":"http://purl.org/sig/ont/fma/fma264783"},{"id":"A84","pred":"fma_id","subj":"T84","obj":"http://purl.org/sig/ont/fma/fma45732"},{"id":"A85","pred":"fma_id","subj":"T85","obj":"http://purl.org/sig/ont/fma/fma62863"},{"id":"A86","pred":"fma_id","subj":"T86","obj":"http://purl.org/sig/ont/fma/fma63183"},{"id":"A87","pred":"fma_id","subj":"T87","obj":"http://purl.org/sig/ont/fma/fma63183"},{"id":"A88","pred":"fma_id","subj":"T88","obj":"http://purl.org/sig/ont/fma/fma9637"},{"id":"A89","pred":"fma_id","subj":"T89","obj":"http://purl.org/sig/ont/fma/fma9637"},{"id":"A90","pred":"fma_id","subj":"T90","obj":"http://purl.org/sig/ont/fma/fma68646"}],"text":"Histomorphological analysis shows peribronchial alveolar parenchyma with marked lymphocytic interstitial pneumonia, multifocal venous thrombi and focal intraalveolar fibrin deposition in terms of DAD. Furthermore, there is a mild centrilobular emphysema (original magnification 100×). In PC-CT, a network of thin septa, thrombi and emphysema, as well as a large empty blood vessel appears. Electron-rich diffuse black granules are also visible. The biopsy punch was selected to contain the empty blood vessel, some small thrombi. It also includes thin septa and tissue embedded dirt-particles. The zoom tomogram covered tissue with black granules as well as a band of inflammatory cells next to a septum wall."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T83","span":{"begin":57,"end":67},"obj":"Body_part"},{"id":"T84","span":{"begin":368,"end":380},"obj":"Body_part"},{"id":"T85","span":{"begin":368,"end":373},"obj":"Body_part"},{"id":"T86","span":{"begin":374,"end":380},"obj":"Body_part"},{"id":"T87","span":{"begin":496,"end":508},"obj":"Body_part"},{"id":"T88","span":{"begin":496,"end":501},"obj":"Body_part"},{"id":"T89","span":{"begin":502,"end":508},"obj":"Body_part"},{"id":"T90","span":{"begin":562,"end":568},"obj":"Body_part"},{"id":"T91","span":{"begin":620,"end":626},"obj":"Body_part"},{"id":"T92","span":{"begin":697,"end":703},"obj":"Body_part"}],"attributes":[{"id":"A83","pred":"uberon_id","subj":"T83","obj":"http://purl.obolibrary.org/obo/UBERON_0000353"},{"id":"A84","pred":"uberon_id","subj":"T84","obj":"http://purl.obolibrary.org/obo/UBERON_0001981"},{"id":"A85","pred":"uberon_id","subj":"T85","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A86","pred":"uberon_id","subj":"T86","obj":"http://purl.obolibrary.org/obo/UBERON_0000055"},{"id":"A87","pred":"uberon_id","subj":"T87","obj":"http://purl.obolibrary.org/obo/UBERON_0001981"},{"id":"A88","pred":"uberon_id","subj":"T88","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A89","pred":"uberon_id","subj":"T89","obj":"http://purl.obolibrary.org/obo/UBERON_0000055"},{"id":"A90","pred":"uberon_id","subj":"T90","obj":"http://purl.obolibrary.org/obo/UBERON_0000479"},{"id":"A91","pred":"uberon_id","subj":"T91","obj":"http://purl.obolibrary.org/obo/UBERON_0000479"},{"id":"A92","pred":"uberon_id","subj":"T92","obj":"http://purl.obolibrary.org/obo/UBERON_0003037"}],"text":"Histomorphological analysis shows peribronchial alveolar parenchyma with marked lymphocytic interstitial pneumonia, multifocal venous thrombi and focal intraalveolar fibrin deposition in terms of DAD. Furthermore, there is a mild centrilobular emphysema (original magnification 100×). In PC-CT, a network of thin septa, thrombi and emphysema, as well as a large empty blood vessel appears. Electron-rich diffuse black granules are also visible. The biopsy punch was selected to contain the empty blood vessel, some small thrombi. It also includes thin septa and tissue embedded dirt-particles. The zoom tomogram covered tissue with black granules as well as a band of inflammatory cells next to a septum wall."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T33","span":{"begin":80,"end":114},"obj":"Disease"},{"id":"T34","span":{"begin":105,"end":114},"obj":"Disease"},{"id":"T35","span":{"begin":244,"end":253},"obj":"Disease"},{"id":"T36","span":{"begin":332,"end":341},"obj":"Disease"}],"attributes":[{"id":"A33","pred":"mondo_id","subj":"T33","obj":"http://purl.obolibrary.org/obo/MONDO_0009537"},{"id":"A34","pred":"mondo_id","subj":"T34","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A35","pred":"mondo_id","subj":"T35","obj":"http://purl.obolibrary.org/obo/MONDO_0004849"},{"id":"A36","pred":"mondo_id","subj":"T36","obj":"http://purl.obolibrary.org/obo/MONDO_0004849"}],"text":"Histomorphological analysis shows peribronchial alveolar parenchyma with marked lymphocytic interstitial pneumonia, multifocal venous thrombi and focal intraalveolar fibrin deposition in terms of DAD. Furthermore, there is a mild centrilobular emphysema (original magnification 100×). In PC-CT, a network of thin septa, thrombi and emphysema, as well as a large empty blood vessel appears. Electron-rich diffuse black granules are also visible. The biopsy punch was selected to contain the empty blood vessel, some small thrombi. It also includes thin septa and tissue embedded dirt-particles. The zoom tomogram covered tissue with black granules as well as a band of inflammatory cells next to a septum wall."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T136","span":{"begin":223,"end":224},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T137","span":{"begin":295,"end":296},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T138","span":{"begin":354,"end":355},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T139","span":{"begin":368,"end":380},"obj":"http://purl.obolibrary.org/obo/UBERON_0001981"},{"id":"T140","span":{"begin":368,"end":380},"obj":"http://www.ebi.ac.uk/efo/EFO_0000817"},{"id":"T141","span":{"begin":496,"end":508},"obj":"http://purl.obolibrary.org/obo/UBERON_0001981"},{"id":"T142","span":{"begin":496,"end":508},"obj":"http://www.ebi.ac.uk/efo/EFO_0000817"},{"id":"T143","span":{"begin":658,"end":659},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T144","span":{"begin":681,"end":686},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T145","span":{"begin":695,"end":696},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"Histomorphological analysis shows peribronchial alveolar parenchyma with marked lymphocytic interstitial pneumonia, multifocal venous thrombi and focal intraalveolar fibrin deposition in terms of DAD. Furthermore, there is a mild centrilobular emphysema (original magnification 100×). In PC-CT, a network of thin septa, thrombi and emphysema, as well as a large empty blood vessel appears. Electron-rich diffuse black granules are also visible. The biopsy punch was selected to contain the empty blood vessel, some small thrombi. It also includes thin septa and tissue embedded dirt-particles. The zoom tomogram covered tissue with black granules as well as a band of inflammatory cells next to a septum wall."}

{"project":"LitCovid-sentences","denotations":[{"id":"T109","span":{"begin":0,"end":200},"obj":"Sentence"},{"id":"T110","span":{"begin":201,"end":284},"obj":"Sentence"},{"id":"T111","span":{"begin":285,"end":389},"obj":"Sentence"},{"id":"T112","span":{"begin":390,"end":444},"obj":"Sentence"},{"id":"T113","span":{"begin":445,"end":529},"obj":"Sentence"},{"id":"T114","span":{"begin":530,"end":593},"obj":"Sentence"},{"id":"T115","span":{"begin":594,"end":709},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Histomorphological analysis shows peribronchial alveolar parenchyma with marked lymphocytic interstitial pneumonia, multifocal venous thrombi and focal intraalveolar fibrin deposition in terms of DAD. Furthermore, there is a mild centrilobular emphysema (original magnification 100×). In PC-CT, a network of thin septa, thrombi and emphysema, as well as a large empty blood vessel appears. Electron-rich diffuse black granules are also visible. The biopsy punch was selected to contain the empty blood vessel, some small thrombi. It also includes thin septa and tissue embedded dirt-particles. The zoom tomogram covered tissue with black granules as well as a band of inflammatory cells next to a septum wall."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T20","span":{"begin":108,"end":117},"obj":"Phenotype"},{"id":"T21","span":{"begin":233,"end":256},"obj":"Phenotype"},{"id":"T22","span":{"begin":335,"end":344},"obj":"Phenotype"}],"attributes":[{"id":"A20","pred":"hp_id","subj":"T20","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A21","pred":"hp_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/HP_0032966"},{"id":"A22","pred":"hp_id","subj":"T22","obj":"http://purl.obolibrary.org/obo/HP_0002097"}],"text":"Histomorphological analysis shows peribronchial alveolar parenchyma with marked lymphocytic interstitial pneumonia, multifocal venous thrombi and focal intraalveolar fibrin deposition in terms of DAD. Furthermore, there is a mild centrilobular emphysema (original magnification 100×). In PC-CT, a network of thin septa, thrombi and emphysema, as well as a large empty blood vessel appears. Electron-rich diffuse black granules are also visible. The biopsy punch was selected to contain the empty blood vessel, some small thrombi. It also includes thin septa and tissue embedded dirt-particles. The zoom tomogram covered tissue with black granules as well as a band of inflammatory cells next to a septum wall."}

{"project":"LitCovid-PubTator","denotations":[{"id":"175","span":{"begin":80,"end":114},"obj":"Disease"},{"id":"176","span":{"begin":116,"end":141},"obj":"Disease"},{"id":"177","span":{"begin":244,"end":253},"obj":"Disease"},{"id":"178","span":{"begin":320,"end":341},"obj":"Disease"},{"id":"179","span":{"begin":288,"end":293},"obj":"CellLine"}],"attributes":[{"id":"A175","pred":"tao:has_database_id","subj":"175","obj":"MESH:D009395"},{"id":"A177","pred":"tao:has_database_id","subj":"177","obj":"MESH:D004646"},{"id":"A178","pred":"tao:has_database_id","subj":"178","obj":"MESH:D004646"},{"id":"A179","pred":"tao:has_database_id","subj":"179","obj":"CVCL:B848"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Histomorphological analysis shows peribronchial alveolar parenchyma with marked lymphocytic interstitial pneumonia, multifocal venous thrombi and focal intraalveolar fibrin deposition in terms of DAD. Furthermore, there is a mild centrilobular emphysema (original magnification 100×). In PC-CT, a network of thin septa, thrombi and emphysema, as well as a large empty blood vessel appears. Electron-rich diffuse black granules are also visible. The biopsy punch was selected to contain the empty blood vessel, some small thrombi. It also includes thin septa and tissue embedded dirt-particles. The zoom tomogram covered tissue with black granules as well as a band of inflammatory cells next to a septum wall."}