PMC:7473770 / 10877-11552 JSONTXT

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T42","span":{"begin":573,"end":578},"obj":"Body_part"}],"attributes":[{"id":"A42","pred":"uberon_id","subj":"T42","obj":"http://purl.obolibrary.org/obo/UBERON_0002542"}],"text":"Overview of reconstruction volumes, exemplified for a punch biopsy of pulmonary autopsy sample I.\n(a) Virtual section through the stitched reconstruction volume with indicated position for the 1 mm biopsy punch. (b) Virtual section through the reconstruction of the 1 mm biopsy punch volume with indicated position for the cone-beam dataset. (c) Virtual section through the cone beam dataset. (d) Image of an HE-stained histological section, which is in close proximity to the virtual slice in (a). (e) 3D views of the biopsy punch. (f) 3D views of the cone-beam datasets. Scale bars: (a) 500⁢μ⁢m and (b,c) 100⁢μ⁢m. The entire reconstruction volume is visualized in Video 1. "}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T86","span":{"begin":52,"end":53},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T87","span":{"begin":99,"end":100},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T88","span":{"begin":213,"end":214},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"},{"id":"T89","span":{"begin":495,"end":501},"obj":"http://purl.obolibrary.org/obo/CLO_0051456"},{"id":"T90","span":{"begin":586,"end":587},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T91","span":{"begin":602,"end":603},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"}],"text":"Overview of reconstruction volumes, exemplified for a punch biopsy of pulmonary autopsy sample I.\n(a) Virtual section through the stitched reconstruction volume with indicated position for the 1 mm biopsy punch. (b) Virtual section through the reconstruction of the 1 mm biopsy punch volume with indicated position for the cone-beam dataset. (c) Virtual section through the cone beam dataset. (d) Image of an HE-stained histological section, which is in close proximity to the virtual slice in (a). (e) 3D views of the biopsy punch. (f) 3D views of the cone-beam datasets. Scale bars: (a) 500⁢μ⁢m and (b,c) 100⁢μ⁢m. The entire reconstruction volume is visualized in Video 1. "}

{"project":"LitCovid-sentences","denotations":[{"id":"T58","span":{"begin":0,"end":97},"obj":"Sentence"},{"id":"T59","span":{"begin":98,"end":572},"obj":"Sentence"},{"id":"T60","span":{"begin":573,"end":675},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Overview of reconstruction volumes, exemplified for a punch biopsy of pulmonary autopsy sample I.\n(a) Virtual section through the stitched reconstruction volume with indicated position for the 1 mm biopsy punch. (b) Virtual section through the reconstruction of the 1 mm biopsy punch volume with indicated position for the cone-beam dataset. (c) Virtual section through the cone beam dataset. (d) Image of an HE-stained histological section, which is in close proximity to the virtual slice in (a). (e) 3D views of the biopsy punch. (f) 3D views of the cone-beam datasets. Scale bars: (a) 500⁢μ⁢m and (b,c) 100⁢μ⁢m. The entire reconstruction volume is visualized in Video 1. "}

{"project":"LitCovid-PubTator","denotations":[{"id":"145","span":{"begin":409,"end":411},"obj":"Chemical"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Overview of reconstruction volumes, exemplified for a punch biopsy of pulmonary autopsy sample I.\n(a) Virtual section through the stitched reconstruction volume with indicated position for the 1 mm biopsy punch. (b) Virtual section through the reconstruction of the 1 mm biopsy punch volume with indicated position for the cone-beam dataset. (c) Virtual section through the cone beam dataset. (d) Image of an HE-stained histological section, which is in close proximity to the virtual slice in (a). (e) 3D views of the biopsy punch. (f) 3D views of the cone-beam datasets. Scale bars: (a) 500⁢μ⁢m and (b,c) 100⁢μ⁢m. The entire reconstruction volume is visualized in Video 1. "}