PMC:7456455 / 7989-8913
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T100 | 94-102 | Body_part | denotes | monocyte | http://purl.org/sig/ont/fma/fma62864 |
| T101 | 498-503 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T102 | 592-620 | Body_part | denotes | mononuclear phagocyte system | http://purl.org/sig/ont/fma/fma84189 |
| T103 | 645-654 | Body_part | denotes | monocytes | http://purl.org/sig/ont/fma/fma62864 |
| T104 | 658-663 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T105 | 669-674 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T106 | 867-876 | Body_part | denotes | monocytes | http://purl.org/sig/ont/fma/fma62864 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T23 | 498-503 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T24 | 658-663 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T47 | 52-60 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T48 | 61-70 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T49 | 165-173 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T50 | 536-545 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T51 | 784-793 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T134 | 92-93 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T135 | 94-102 | http://purl.obolibrary.org/obo/CL_0000576 | denotes | monocyte |
| T136 | 103-113 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activation |
| T137 | 121-122 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T138 | 149-152 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T139 | 498-503 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T140 | 498-503 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T141 | 505-506 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T142 | 574-584 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activation |
| T143 | 592-613 | http://purl.obolibrary.org/obo/CL_0000113 | denotes | mononuclear phagocyte |
| T144 | 645-654 | http://purl.obolibrary.org/obo/CL_0000576 | denotes | monocytes |
| T145 | 658-663 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T146 | 658-663 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T147 | 669-674 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T148 | 696-702 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | active |
| T149 | 867-876 | http://purl.obolibrary.org/obo/CL_0000576 | denotes | monocytes |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T33 | 94-113 | http://purl.obolibrary.org/obo/GO_0042117 | denotes | monocyte activation |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T50 | 121-186 | Sentence | denotes | A time and severity pattern has emerged for COVID-19 progression. |
| T51 | 187-286 | Sentence | denotes | The first days, first and second week timelines are turning points for resolution or deterioration. |
| T52 | 287-462 | Sentence | denotes | Epidemiologic precision for these milestones and precise parameters will be valuable for strategic sampling and patient stratification, sparing resources and patient material. |
| T53 | 463-664 | Sentence | denotes | With limited volumes of peripheral blood, a window on progression of the infection can be obtained by studying activation of the mononuclear phagocyte system, largely represented by monocytes in blood. |
| T54 | 665-794 | Sentence | denotes | The cells are biosynthetically active and relatively long lived, ideal to trace long term effects of comorbidities and infection. |
| T55 | 795-923 | Sentence | denotes | We highlight selected functional categories that should be addressed in monocytes and can be adapted to particular applications. |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T223 | 52-60 | SP_7 | denotes | COVID-19 |
| T224 | 94-102 | CL:0000576 | denotes | monocyte |
| T225 | 165-173 | SP_7 | denotes | COVID-19 |
| T226 | 498-503 | UBERON:0000178 | denotes | blood |
| T227 | 592-603 | GO:0005634;CL:0000113 | denotes | mononuclear |
| T228 | 604-613 | CL:0000113 | denotes | phagocyte |
| T229 | 645-654 | CL:0000576 | denotes | monocytes |
| T230 | 658-663 | UBERON:0000178 | denotes | blood |
| T231 | 867-876 | CL:0000576 | denotes | monocytes |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 141 | 399-406 | Species | denotes | patient | Tax:9606 |
| 142 | 445-452 | Species | denotes | patient | Tax:9606 |
| 143 | 52-60 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 144 | 61-70 | Disease | denotes | infection | MESH:D007239 |
| 145 | 165-173 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 146 | 536-545 | Disease | denotes | infection | MESH:D007239 |
| 147 | 784-793 | Disease | denotes | infection | MESH:D007239 |