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PMC:7455777 / 714-1215 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 44-56 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T2 90-103 Body_part denotes cell membrane http://purl.org/sig/ont/fma/fma63841
T3 90-94 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T8 0-8 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T9 60-68 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T10 373-381 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T11 426-434 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T11 14-15 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T12 90-94 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T13 95-103 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T14 242-243 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T4 16-20 Chemical denotes beta http://purl.obolibrary.org/obo/CHEBI_10545
T5 44-56 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T6 138-149 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T7 0-33 Sentence denotes SARS-CoV-2 is a beta-coronavirus.
T8 34-284 Sentence denotes The spike glycoprotein of SARS-CoV-2 can attach to host cell membrane by recognizing and binding to the angiotensin-converting enzyme 2 (ACE2) receptor, and transmembrane protease type 2 (TMPRSS2) also plays a critical role in the viral invasion [1].
T9 285-501 Sentence denotes Based on the homology modeling of receptor binding domain subdomain-1, the structure of SARS-CoV-2 shows about 73.96% sequence identity with SARS-CoV, which might explain the resemblance in biochemical mechanism [2].

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T14 0-10 SP_7 denotes SARS-CoV-2
T15 21-32 NCBITaxon:11118 denotes coronavirus
T16 38-43 PG_18;PG_1 denotes spike
T17 44-56 PG_18;PG_1;CHEBI:17089;BV_11;CHEBI:17089 denotes glycoprotein
T18 60-70 SP_7 denotes SARS-CoV-2
T19 90-103 GO:0033644 denotes cell membrane
T20 138-169 PG_10;PR:000003622 denotes angiotensin-converting enzyme 2
T21 171-175 G_3;PG_10;PR:000003622 denotes ACE2
T22 191-204 GO:0016020 denotes transmembrane
T23 222-229 G_2;PR:000016456 denotes TMPRSS2
T24 265-270 NCBITaxon:10239;GO:0042148 denotes viral
T25 271-279 GO:0042148 denotes invasion
T26 298-306 SO:0000853 denotes homology
T27 336-342 SO:0000417 denotes domain
T28 373-383 SP_7 denotes SARS-CoV-2
T29 426-434 SP_10 denotes SARS-CoV
T91766 0-10 SP_7 denotes SARS-CoV-2
T98252 21-32 NCBITaxon:11118 denotes coronavirus
T85594 38-43 PG_18;PG_1 denotes spike
T45057 44-56 PG_18;PG_1;CHEBI:17089;BV_11;CHEBI:17089 denotes glycoprotein
T13328 60-70 SP_7 denotes SARS-CoV-2
T96603 90-103 GO:0033644 denotes cell membrane
T13578 138-169 PG_10;PR:000003622 denotes angiotensin-converting enzyme 2
T34881 171-175 G_3;PG_10;PR:000003622 denotes ACE2
T72872 191-204 GO:0016020 denotes transmembrane
T81428 222-229 G_2;PR:000016456 denotes TMPRSS2
T44662 265-270 NCBITaxon:10239;GO:0042148 denotes viral
T81441 271-279 GO:0042148 denotes invasion
T91664 298-306 SO:0000853 denotes homology
T5861 336-342 SO:0000417 denotes domain
T95071 373-383 SP_7 denotes SARS-CoV-2
T22728 426-434 SP_10 denotes SARS-CoV

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
28 138-169 Gene denotes angiotensin-converting enzyme 2 Gene:59272
29 171-175 Gene denotes ACE2 Gene:59272
30 222-229 Gene denotes TMPRSS2 Gene:7113
31 0-10 Species denotes SARS-CoV-2 Tax:2697049
32 16-32 Species denotes beta-coronavirus Tax:694002
33 60-70 Species denotes SARS-CoV-2 Tax:2697049
34 373-383 Species denotes SARS-CoV-2 Tax:2697049
35 426-434 Species denotes SARS-CoV Tax:694009