PMC:7455777 / 714-1215
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T1 | 44-56 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
T2 | 90-103 | Body_part | denotes | cell membrane | http://purl.org/sig/ont/fma/fma63841 |
T3 | 90-94 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T8 | 0-8 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T9 | 60-68 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T10 | 373-381 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T11 | 426-434 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11 | 14-15 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T12 | 90-94 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T13 | 95-103 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
T14 | 242-243 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T4 | 16-20 | Chemical | denotes | beta | http://purl.obolibrary.org/obo/CHEBI_10545 |
T5 | 44-56 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
T6 | 138-149 | Chemical | denotes | angiotensin | http://purl.obolibrary.org/obo/CHEBI_48433 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7 | 0-33 | Sentence | denotes | SARS-CoV-2 is a beta-coronavirus. |
T8 | 34-284 | Sentence | denotes | The spike glycoprotein of SARS-CoV-2 can attach to host cell membrane by recognizing and binding to the angiotensin-converting enzyme 2 (ACE2) receptor, and transmembrane protease type 2 (TMPRSS2) also plays a critical role in the viral invasion [1]. |
T9 | 285-501 | Sentence | denotes | Based on the homology modeling of receptor binding domain subdomain-1, the structure of SARS-CoV-2 shows about 73.96% sequence identity with SARS-CoV, which might explain the resemblance in biochemical mechanism [2]. |
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14 | 0-10 | SP_7 | denotes | SARS-CoV-2 |
T15 | 21-32 | NCBITaxon:11118 | denotes | coronavirus |
T16 | 38-43 | PG_18;PG_1 | denotes | spike |
T17 | 44-56 | PG_18;PG_1;CHEBI:17089;BV_11;CHEBI:17089 | denotes | glycoprotein |
T18 | 60-70 | SP_7 | denotes | SARS-CoV-2 |
T19 | 90-103 | GO:0033644 | denotes | cell membrane |
T20 | 138-169 | PG_10;PR:000003622 | denotes | angiotensin-converting enzyme 2 |
T21 | 171-175 | G_3;PG_10;PR:000003622 | denotes | ACE2 |
T22 | 191-204 | GO:0016020 | denotes | transmembrane |
T23 | 222-229 | G_2;PR:000016456 | denotes | TMPRSS2 |
T24 | 265-270 | NCBITaxon:10239;GO:0042148 | denotes | viral |
T25 | 271-279 | GO:0042148 | denotes | invasion |
T26 | 298-306 | SO:0000853 | denotes | homology |
T27 | 336-342 | SO:0000417 | denotes | domain |
T28 | 373-383 | SP_7 | denotes | SARS-CoV-2 |
T29 | 426-434 | SP_10 | denotes | SARS-CoV |
T91766 | 0-10 | SP_7 | denotes | SARS-CoV-2 |
T98252 | 21-32 | NCBITaxon:11118 | denotes | coronavirus |
T85594 | 38-43 | PG_18;PG_1 | denotes | spike |
T45057 | 44-56 | PG_18;PG_1;CHEBI:17089;BV_11;CHEBI:17089 | denotes | glycoprotein |
T13328 | 60-70 | SP_7 | denotes | SARS-CoV-2 |
T96603 | 90-103 | GO:0033644 | denotes | cell membrane |
T13578 | 138-169 | PG_10;PR:000003622 | denotes | angiotensin-converting enzyme 2 |
T34881 | 171-175 | G_3;PG_10;PR:000003622 | denotes | ACE2 |
T72872 | 191-204 | GO:0016020 | denotes | transmembrane |
T81428 | 222-229 | G_2;PR:000016456 | denotes | TMPRSS2 |
T44662 | 265-270 | NCBITaxon:10239;GO:0042148 | denotes | viral |
T81441 | 271-279 | GO:0042148 | denotes | invasion |
T91664 | 298-306 | SO:0000853 | denotes | homology |
T5861 | 336-342 | SO:0000417 | denotes | domain |
T95071 | 373-383 | SP_7 | denotes | SARS-CoV-2 |
T22728 | 426-434 | SP_10 | denotes | SARS-CoV |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
28 | 138-169 | Gene | denotes | angiotensin-converting enzyme 2 | Gene:59272 |
29 | 171-175 | Gene | denotes | ACE2 | Gene:59272 |
30 | 222-229 | Gene | denotes | TMPRSS2 | Gene:7113 |
31 | 0-10 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
32 | 16-32 | Species | denotes | beta-coronavirus | Tax:694002 |
33 | 60-70 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
34 | 373-383 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
35 | 426-434 | Species | denotes | SARS-CoV | Tax:694009 |