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PMC:7455777 / 5088-6087 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T37 63-66 Body_part denotes CNS http://purl.org/sig/ont/fma/fma55675
T38 217-237 Body_part denotes olfactory epithelium http://purl.org/sig/ont/fma/fma64803
T39 227-237 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T40 266-273 Body_part denotes Protein http://purl.org/sig/ont/fma/fma67257
T41 302-320 Body_part denotes non-neuronal cells http://purl.org/sig/ont/fma/fma54536
T42 315-320 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T43 364-369 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T44 371-381 Body_part denotes stem cells http://purl.org/sig/ont/fma/fma63368
T45 376-381 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T46 396-405 Body_part denotes pericytes http://purl.org/sig/ont/fma/fma63174
T47 502-506 Body_part denotes bulb http://purl.org/sig/ont/fma/fma62004
T48 507-514 Body_part denotes neurons http://purl.org/sig/ont/fma/fma54527
T49 542-560 Body_part denotes non-neuronal cells http://purl.org/sig/ont/fma/fma54536
T50 555-560 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T51 684-691 Body_part denotes neurons http://purl.org/sig/ont/fma/fma54527
T52 810-825 Body_part denotes olfactory bulbs http://purl.org/sig/ont/fma/fma77624
T53 968-972 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T54 976-998 Body_part denotes gastrointestinal tract http://purl.org/sig/ont/fma/fma71132

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T26 63-66 Body_part denotes CNS http://purl.obolibrary.org/obo/UBERON_0001017
T27 217-237 Body_part denotes olfactory epithelium http://purl.obolibrary.org/obo/UBERON_0001997
T28 227-237 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T29 810-825 Body_part denotes olfactory bulbs http://purl.obolibrary.org/obo/UBERON_0002264
T30 968-972 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T49 27-35 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T50 158-166 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T51 194-209 Disease denotes viral infection http://purl.obolibrary.org/obo/MONDO_0005108
T52 200-209 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T53 447-455 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T54 458-467 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T55 529-538 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T77 63-66 http://www.ebi.ac.uk/efo/EFO_0000302 denotes CNS
T78 63-66 http://www.ebi.ac.uk/efo/EFO_0000908 denotes CNS
T79 63-66 http://purl.obolibrary.org/obo/UBERON_0001017 denotes CNS
T80 227-237 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T81 260-273 http://purl.obolibrary.org/obo/PR_000029067 denotes Human Protein
T82 315-320 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T83 345-355 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T84 356-369 http://purl.obolibrary.org/obo/CL_0000630 denotes support cells
T85 371-381 http://purl.obolibrary.org/obo/CL_0000034 denotes stem cells
T86 555-560 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T87 723-730 http://purl.obolibrary.org/obo/SO_0000418 denotes signals
T88 778-783 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T89 952-958 http://purl.obolibrary.org/obo/UBERON_0001021 denotes nerves
T90 968-972 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T91 968-972 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T92 976-998 http://purl.obolibrary.org/obo/UBERON_0005409 denotes gastrointestinal tract

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T7 266-273 Chemical denotes Protein http://purl.obolibrary.org/obo/CHEBI_16541
T8 281-284 Chemical denotes HPA http://purl.obolibrary.org/obo/CHEBI_29031|http://purl.obolibrary.org/obo/CHEBI_53393|http://purl.obolibrary.org/obo/CHEBI_61431|http://purl.obolibrary.org/obo/CHEBI_64342

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T3 194-209 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infection
T4 625-647 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammatory responses

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T31 0-97 Sentence denotes It remains unclear whether SARS-CoV-2 is able to penetrate the CNS via neuronal retrograde route.
T32 98-238 Sentence denotes Olfactory dysfunction is one of the most common symptoms in COVID-19, which is often related to viral infection of the olfactory epithelium.
T33 239-520 Sentence denotes But according to the Human Protein Atlas (HPA) database, it is non-neuronal cells (for example, olfactory epithelial support cells, stem cells, and vascular pericytes) that express ACE2 and are vulnerable to SARS-CoV-2 infection, rather than olfactory sensory or bulb neurons [12].
T34 521-731 Sentence denotes Primary infection of non-neuronal cells possibly causes olfactory dysfunction by leading to significant inflammatory responses, altering the function of olfactory neurons, and influencing the olfactory signals.
T35 732-851 Sentence denotes Besides, no specific changes referable to the virus have been observed in the olfactory bulbs or tracts at autopsy [6].
T36 852-999 Sentence denotes Thus, further studies may be needed to determine whether there are other neuronal pathways, such as nerves from the lung or gastrointestinal tract.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T105 27-37 SP_7 denotes SARS-CoV-2
T106 63-66 UBERON:0001017 denotes CNS
T107 71-79 CL:0000540 denotes neuronal
T108 98-107 GO:0007608 denotes Olfactory
T109 158-166 SP_7 denotes COVID-19
T110 194-199 NCBITaxon:10239 denotes viral
T111 217-226 GO:0007608;UBERON:0001997 denotes olfactory
T112 227-237 UBERON:0001997 denotes epithelium
T113 260-265 SP_6;NCBITaxon:9606 denotes Human
T114 306-314 CL:0000540 denotes neuronal
T115 335-344 GO:0007608;UBERON:0001997;CL:0000853 denotes olfactory
T116 345-355 UBERON:0001997;CL:0000853 denotes epithelial
T117 356-369 CL:0000853 denotes support cells
T118 371-381 CL:0000034 denotes stem cells
T119 396-405 CL:0000669 denotes pericytes
T120 412-419 GO:0010467 denotes express
T121 420-424 G_3;PG_10;PR:000003622 denotes ACE2
T122 447-451 PR:000014459;SP_7 denotes SARS
T123 451-457 SP_7 denotes -CoV-2
T124 481-490 GO:0007608;CL:0000207 denotes olfactory
T125 491-498 CL:0000207 denotes sensory
T126 507-514 CL:0000540 denotes neurons
T127 546-554 CL:0000540 denotes neuronal
T128 577-586 GO:0007608 denotes olfactory
T129 674-683 CL:0000207;GO:0007608 denotes olfactory
T130 684-691 CL:0000540 denotes neurons
T131 713-722 GO:0007608 denotes olfactory
T132 778-783 NCBITaxon:10239 denotes virus
T133 810-819 GO:0007608;UBERON:0002264 denotes olfactory
T134 820-825 UBERON:0002264 denotes bulbs
T135 925-933 CL:0000540 denotes neuronal
T136 952-958 UBERON:0001021 denotes nerves
T137 968-972 UBERON:0002048 denotes lung
T138 976-998 UBERON:0001555 denotes gastrointestinal tract
T3336 9-14 UBERON:0002264 denotes s unc
T73156 114-122 CL:0000540 denotes ction is
T3243 141-147 UBERON:0001021 denotes mmon s
T75854 157-161 UBERON:0002048 denotes COV
T6635 165-187 UBERON:0001555 denotes 9, which is often rela
T14312 295-305 SP_7 denotes it is non
T99229 309-327 UBERON:0001359 denotes ronal cells (for e
T42859 329-332 UBERON:0001359 denotes mpl
T13748 392-402 SP_7 denotes lar pericy
T39664 448-453 NCBITaxon:10239 denotes ARS-C
T42828 463-471 UBERON:0010743 denotes tion, ra
T68773 476-484 UBERON:0001893 denotes than olf
T45301 485-502 UBERON:0002049 denotes ctory sensory or
T83636 543-549 UBERON:0000479 denotes on-neu
T99415 550-560 GO:0010467 denotes onal cells
T23142 583-586 UBERON:0001017;CL:0000117 denotes ory
T30604 587-592 CL:0000117 denotes dysfu
T33002 593-600 GO:0010467 denotes ction b
T71452 622-629 G_2;PR:000016456 denotes nt infl
T72350 653-663 SP_7 denotes ring the f
T58064 673-683 GO:0035376 denotes olfactory
T59513 750-760 SP_7 denotes ic changes
T24395 776-781 SP_6;NCBITaxon:9606 denotes e vir
T42636 790-811 CL:0002248 denotes een observed in the o
T43328 870-881 GO:0006260 denotes ies may be
T26162 901-912 UBERON:0000955 denotes whether the
T14083 924-931 G_2;PR:000016456 denotes neuron
T31777 932-936 SO:0000704;GO:0010467 denotes l pa
T53408 937-947 GO:0010467 denotes hways, suc

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
146 420-424 Gene denotes ACE2 Gene:59272
147 27-37 Species denotes SARS-CoV-2 Tax:2697049
148 260-265 Species denotes Human Tax:9606
149 98-119 Disease denotes Olfactory dysfunction MESH:D000857
150 158-166 Disease denotes COVID-19 MESH:C000657245
151 194-209 Disease denotes viral infection MESH:D001102
152 281-284 Disease denotes HPA MESH:D010661
153 447-467 Disease denotes SARS-CoV-2 infection MESH:C000657245
154 521-538 Disease denotes Primary infection MESH:D007239
155 577-598 Disease denotes olfactory dysfunction MESH:D000857