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PMC:7445716 / 49967-50852 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T311 19-24 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T312 227-238 Body_part denotes erythrocyte http://purl.org/sig/ont/fma/fma62845
T313 348-351 Body_part denotes IgM http://purl.org/sig/ont/fma/fma62873
T314 430-437 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T315 450-454 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T316 464-469 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T317 475-480 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T318 482-485 Body_part denotes CSF http://purl.org/sig/ont/fma/fma20935
T319 486-493 Body_part denotes glucose http://purl.org/sig/ont/fma/fma82743
T320 636-641 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T321 726-732 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970
T322 807-813 Body_part denotes muscle http://purl.org/sig/ont/fma/fma32558

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T142 19-24 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T143 475-480 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977
T144 636-641 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T509 295-304 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T510 367-387 Disease denotes Chlamydia pneumoniae http://purl.obolibrary.org/obo/MONDO_0025598
T511 392-413 Disease denotes Mycoplasma pneumoniae http://purl.obolibrary.org/obo/MONDO_0005867
T512 518-526 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T513 548-556 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T514 676-680 Disease denotes AIDP http://purl.obolibrary.org/obo/MONDO_0020347

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T353 19-24 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T354 227-238 http://purl.obolibrary.org/obo/CL_0000232 denotes erythrocyte
T355 261-265 http://purl.obolibrary.org/obo/CLO_0051422 denotes mm/1
T356 305-310 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T357 311-312 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T358 313-314 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T359 338-343 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Virus
T360 450-454 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T361 464-469 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T362 636-641 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T363 636-641 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T364 726-732 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T365 807-813 http://purl.obolibrary.org/obo/UBERON_0001630 denotes muscle
T366 807-813 http://purl.obolibrary.org/obo/UBERON_0005090 denotes muscle
T367 807-813 http://www.ebi.ac.uk/efo/EFO_0000801 denotes muscle
T368 807-813 http://www.ebi.ac.uk/efo/EFO_0001949 denotes muscle

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T48282 430-437 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T15872 486-493 Chemical denotes glucose http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T12 601-610 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T13 733-741 http://purl.obolibrary.org/obo/GO_0015297 denotes exchange

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
669 99-102 Gene denotes CR Gene:1401
749 294-309 Species denotes influenza viru Tax:11308
750 312-342 Species denotes /B, Respiratory Syncytial Viru Tax:11246
751 366-386 Species denotes Chlamydia pneumonia Tax:83558
752 391-412 Species denotes Mycoplasma pneumonia Tax:2104
753 517-527 Species denotes SARS-CoV- Tax:2697049
815 289-292 Species denotes EB Tax:10376
816 547-557 Species denotes -SARS-CoV- Tax:2697049
834 485-492 Chemical denotes glucos MESH:D005947

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T274 0-85 Sentence denotes Helbok et al. [24] Chest CT + serology (repeated negative RT-PCR) WBC 8.1G/L (normal:
T275 86-123 Sentence denotes 4.0–10.0G/L), CRP 2.3 mg/dL, (normal:
T276 124-175 Sentence denotes 0.0–0.5 mg/dL), fibrinogen level 650 mg/dL (normal:
T277 176-212 Sentence denotes 210–400 mg/dL), LDH 276 U/L (normal:
T278 213-461 Sentence denotes 100–250 U/L), erythrocyte sedimentation rate 55 mm/1 h Negative PCR for CMV, EBV, influenza virus A/B, Respiratory Syncytial Virus and IgM antibodies for Chlamydia pneumoniae and Mycoplasma pneumoniae Increased total protein (64 mg/dl), cell count:
T279 462-675 Sentence denotes 2 cells/mm3, serum/ CSF glucose ratio of 0.83, negative SARS-CoV-2 PCR, positive anti-SARS-CoV-2 antibodies (not determined if intrathecal synthesis or passive transfer from blood) Demyelinating with sural sparing
T280 676-885 Sentence denotes AIDP Spinal: no pathological findings IVIG 30 g + plasma exchange (4 cycles) + mechanical invasive ventilation None Improvement of muscle forces with recovery of mobility without significant help after 8 weeks

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T673 377-387 Phenotype denotes pneumoniae http://purl.obolibrary.org/obo/HP_0002090
T674 403-413 Phenotype denotes pneumoniae http://purl.obolibrary.org/obo/HP_0002090
T675 643-656 Phenotype denotes Demyelinating http://purl.obolibrary.org/obo/HP_0011096

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T560 140-150 GO:0005577 denotes fibrinogen
T561 227-238 CL:0000232 denotes erythrocyte
T562 285-288 NCBITaxon:10358 denotes CMV
T563 290-293 NCBITaxon:10376 denotes EBV
T564 295-304 NCBITaxon:7719 denotes influenza
T565 305-310 NCBITaxon:10376 denotes virus
T566 316-327 NCBITaxon:12814 denotes Respiratory
T567 338-343 NCBITaxon:10376 denotes Virus
T568 348-362 GO:0071754 denotes IgM antibodies
T569 367-376 NCBITaxon:7719 denotes Chlamydia
T570 377-387 NCBITaxon:83558 denotes pneumoniae
T571 475-480 UBERON:0001977 denotes serum
T572 486-493 CHEBI:17234;CHEBI:17234 denotes glucose
T573 518-528 SP_7 denotes SARS-CoV-2
T574 548-558 SP_7 denotes SARS-CoV-2
T575 559-569 GO:0042571 denotes antibodies
T576 636-641 UBERON:0000178 denotes blood
T577 726-732 UBERON:0001969;GO:0007585 denotes plasma
T578 733-741 GO:0007585 denotes exchange

2_test

Id Subject Object Predicate Lexical cue
32840686-32558002-63205769 14-16 32558002 denotes [2