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PMC:7441788 / 9783-10132 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T53 235-247 Body_part denotes gangliosides http://purl.org/sig/ont/fma/fma82816
T54 260-272 Body_part denotes cell surface http://purl.org/sig/ont/fma/fma67653
T55 260-264 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T56 332-344 Body_part denotes gangliosides http://purl.org/sig/ont/fma/fma82816

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T73 28-37 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T74 63-71 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T75 153-161 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T101 103-104 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T102 186-187 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T103 260-264 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T124 235-247 Chemical denotes gangliosides http://purl.obolibrary.org/obo/CHEBI_28892
T125 281-292 Chemical denotes sialic acid http://purl.obolibrary.org/obo/CHEBI_26667
T126 288-292 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T127 302-304 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638
T128 315-327 Chemical denotes sialic acids http://purl.obolibrary.org/obo/CHEBI_26667
T129 322-327 Chemical denotes acids http://purl.obolibrary.org/obo/CHEBI_37527
T130 332-344 Chemical denotes gangliosides http://purl.obolibrary.org/obo/CHEBI_28892

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T82 235-247 Chemical denotes gangliosides http://purl.obolibrary.org/obo/CHEBI_28892
T83 281-292 Chemical denotes sialic acid http://purl.obolibrary.org/obo/CHEBI_26667
T84 302-304 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638
T85 315-327 Chemical denotes sialic acids http://purl.obolibrary.org/obo/CHEBI_26667
T86 332-344 Chemical denotes gangliosides http://purl.obolibrary.org/obo/CHEBI_28892

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T76 63-71 Species denotes SARS-CoV NCBItxid:694009
T77 81-90 Species denotes HCoV-OC43 NCBItxid:31631
T78 153-163 Species denotes SARS-CoV-2 NCBItxid:2697049

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T73 103-301 Sentence denotes A recent molecular structure analysis showed that SARS-CoV-2 not only uses ACE2 as a receptor, but also recognizes highly conserved gangliosides on the host cell surface through sialic acid [24,25].

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
394 178-182 Gene denotes ACE2 Gene:59272
397 302-308 Gene denotes CQ/HCQ
398 63-71 Species denotes SARS-CoV Tax:694009
400 153-163 Species denotes SARS-CoV-2 Tax:2697049
401 28-37 Species denotes influenza Tax:11320
406 235-247 Chemical denotes gangliosides MESH:D005732
407 281-292 Chemical denotes sialic acid MESH:D019158
408 315-327 Chemical denotes sialic acids MESH:D012794
409 332-344 Chemical denotes gangliosides MESH:D005732

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T417 178-182 Protein denotes ACE2 https://www.uniprot.org/uniprot/Q9UFZ6

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T81 255-259 http://purl.obolibrary.org/obo/IDO_0000531 denotes host
T82 260-264 http://purl.obolibrary.org/obo/CL_0000000 denotes cell

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T53 235-247 Body_part denotes gangliosides http://purl.org/sig/ont/fma/fma82816
T54 260-272 Body_part denotes cell surface http://purl.org/sig/ont/fma/fma67653
T55 260-264 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T56 332-344 Body_part denotes gangliosides http://purl.org/sig/ont/fma/fma82816

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T66 28-37 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T67 63-71 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T68 153-163 Disease denotes SARS-CoV-2 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
394 178-182 Gene denotes ACE2 Gene:59272
397 302-308 Gene denotes CQ/HCQ
398 63-71 Species denotes SARS-CoV Tax:694009
399 81-90 Species denotes HCoV-OC43 Tax:31631
400 153-163 Species denotes SARS-CoV-2 Tax:2697049
401 28-37 Species denotes influenza Tax:11320
406 235-247 Chemical denotes gangliosides MESH:D005732
407 281-292 Chemical denotes sialic acid MESH:D019158
408 315-327 Chemical denotes sialic acids MESH:D012794
409 332-344 Chemical denotes gangliosides MESH:D005732

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T73 103-301 Sentence denotes A recent molecular structure analysis showed that SARS-CoV-2 not only uses ACE2 as a receptor, but also recognizes highly conserved gangliosides on the host cell surface through sialic acid [24,25].

2_test

Id Subject Object Predicate Lexical cue
32496926-18279660-132195669 73-75 18279660 denotes 21
32496926-16115318-132195670 92-94 16115318 denotes 13
32496926-31160783-132195671 95-97 31160783 denotes 22
32496926-23873408-132195672 98-100 23873408 denotes 23
32496926-32221306-132195673 294-296 32221306 denotes 24