PMC:7441788 / 119-750
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T1 | 263-272 | Body_part | denotes | malarials | http://purl.org/sig/ont/fma/fma46831 |
T2 | 445-453 | Body_part | denotes | endosome | http://purl.org/sig/ont/fma/fma67180 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T3 | 24-48 | Disease | denotes | Coronavirus Disease 2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T4 | 50-58 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T5 | 71-118 | Disease | denotes | severe acute respiratory syndrome coronavirus 2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T6 | 71-104 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
T7 | 120-128 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T8 | 211-219 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T9 | 359-367 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 491-499 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
T2 | 537-545 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activity |
T3 | 600-601 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T5 | 231-236 | Chemical | denotes | drugs | http://purl.obolibrary.org/obo/CHEBI_23888 |
T6 | 274-285 | Chemical | denotes | chloroquine | http://purl.obolibrary.org/obo/CHEBI_3638 |
T7 | 287-289 | Chemical | denotes | CQ | http://purl.obolibrary.org/obo/CHEBI_3638 |
T8 | 295-313 | Chemical | denotes | hydroxychloroquine | http://purl.obolibrary.org/obo/CHEBI_5801 |
T9 | 369-371 | Chemical | denotes | CQ | http://purl.obolibrary.org/obo/CHEBI_3638 |
LitCovid-sample-MedDRA
Id | Subject | Object | Predicate | Lexical cue | meddra_id |
---|---|---|---|---|---|
T1 | 243-256 | http://purl.bioontology.org/ontology/MEDDRA/10022891 | denotes | investigation | http://purl.bioontology.org/ontology/MEDDRA/10062026 |
LitCovid-sample-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T3 | 274-285 | Chemical | denotes | chloroquine | http://purl.obolibrary.org/obo/CHEBI_3638 |
T4 | 287-289 | Chemical | denotes | CQ | http://purl.obolibrary.org/obo/CHEBI_3638 |
T5 | 295-313 | Chemical | denotes | hydroxychloroquine | http://purl.obolibrary.org/obo/CHEBI_5801 |
T6 | 369-371 | Chemical | denotes | CQ | http://purl.obolibrary.org/obo/CHEBI_3638 |
LitCovid-sample-PD-NCBITaxon
Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
---|---|---|---|---|---|
T2 | 24-48 | Species | denotes | Coronavirus Disease 2019 | NCBItxid:2697049 |
T3 | 50-58 | Species | denotes | COVID-19 | NCBItxid:2697049 |
T4 | 71-118 | Species | denotes | severe acute respiratory syndrome coronavirus 2 | NCBItxid:2697049 |
T5 | 120-130 | Species | denotes | SARS-CoV-2 | NCBItxid:2697049 |
T6 | 211-219 | Species | denotes | COVID-19 | NCBItxid:2697049 |
T7 | 359-367 | Species | denotes | COVID-19 | NCBItxid:2697049 |
LitCovid-sample-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5 | 6-14 | Sentence | denotes | Abstract |
T6 | 15-23 | Sentence | denotes | ABSTRACT |
T7 | 24-156 | Sentence | denotes | Coronavirus Disease 2019 (COVID-19), caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is spreading worldwide. |
T8 | 157-220 | Sentence | denotes | Antiviral therapy is the most important treatment for COVID-19. |
T9 | 221-368 | Sentence | denotes | Among the drugs under investigation, anti-malarials, chloroquine (CQ) and hydroxychloroquine (HCQ), are being repurposed as treatment for COVID-19. |
T10 | 369-546 | Sentence | denotes | CQ/HCQ were shown to prevent receptor recognition by coronaviruses, inhibit endosome acidification, which interferes with membrane fusion, and exhibit immunomodulatory activity. |
LitCovid-sample-Pubtator
Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
---|---|---|---|---|---|
41 | 71-118 | Species | denotes | severe acute respiratory syndrome coronavirus 2 | Tax:2697049 |
42 | 120-130 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
43 | 422-435 | Species | denotes | coronaviruses | Tax:11118 |
48 | 274-285 | Chemical | denotes | chloroquine | MESH:D002738 |
49 | 287-289 | Chemical | denotes | CQ | MESH:D002738 |
50 | 295-313 | Chemical | denotes | hydroxychloroquine | MESH:D006886 |
51 | 315-318 | Chemical | denotes | HCQ | MESH:D006886 |
63 | 24-48 | Disease | denotes | Coronavirus Disease 2019 | MESH:C000657245 |
64 | 50-58 | Disease | denotes | COVID-19 | MESH:C000657245 |
65 | 211-219 | Disease | denotes | COVID-19 | MESH:C000657245 |
66 | 359-367 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-sample-PD-IDO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 36-43 | http://purl.obolibrary.org/obo/OGMS_0000031 | denotes | Disease |
T2 | 157-166 | http://purl.obolibrary.org/obo/IDO_0000559 | denotes | Antiviral |
LitCovid-sample-PD-FMA
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T1 | 263-272 | Body_part | denotes | malarials | http://purl.org/sig/ont/fma/fma46831 |
T2 | 445-453 | Body_part | denotes | endosome | http://purl.org/sig/ont/fma/fma67180 |
LitCovid-sample-PD-GO-BP-0
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 454-467 | http://purl.obolibrary.org/obo/GO_0045851 | denotes | acidification |
T2 | 491-506 | http://purl.obolibrary.org/obo/GO_0061025 | denotes | membrane fusion |
LitCovid-sample-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T2 | 24-48 | Disease | denotes | Coronavirus Disease 2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T3 | 50-58 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T4 | 71-118 | Disease | denotes | severe acute respiratory syndrome coronavirus 2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T5 | 120-130 | Disease | denotes | SARS-CoV-2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T6 | 211-219 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T7 | 359-367 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-sample-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 454-467 | http://purl.obolibrary.org/obo/GO_0045851 | denotes | acidification |
T2 | 491-506 | http://purl.obolibrary.org/obo/GO_0061025 | denotes | membrane fusion |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 454-467 | http://purl.obolibrary.org/obo/GO_0045851 | denotes | acidification |
T2 | 491-506 | http://purl.obolibrary.org/obo/GO_0061025 | denotes | membrane fusion |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
41 | 71-118 | Species | denotes | severe acute respiratory syndrome coronavirus 2 | Tax:2697049 |
42 | 120-130 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
43 | 422-435 | Species | denotes | coronaviruses | Tax:11118 |
48 | 274-285 | Chemical | denotes | chloroquine | MESH:D002738 |
49 | 287-289 | Chemical | denotes | CQ | MESH:D002738 |
50 | 295-313 | Chemical | denotes | hydroxychloroquine | MESH:D006886 |
51 | 315-318 | Chemical | denotes | HCQ | MESH:D006886 |
63 | 24-48 | Disease | denotes | Coronavirus Disease 2019 | MESH:C000657245 |
64 | 50-58 | Disease | denotes | COVID-19 | MESH:C000657245 |
65 | 211-219 | Disease | denotes | COVID-19 | MESH:C000657245 |
66 | 359-367 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5 | 6-14 | Sentence | denotes | Abstract |
T6 | 15-23 | Sentence | denotes | ABSTRACT |
T7 | 24-156 | Sentence | denotes | Coronavirus Disease 2019 (COVID-19), caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is spreading worldwide. |
T8 | 157-220 | Sentence | denotes | Antiviral therapy is the most important treatment for COVID-19. |
T9 | 221-368 | Sentence | denotes | Among the drugs under investigation, anti-malarials, chloroquine (CQ) and hydroxychloroquine (HCQ), are being repurposed as treatment for COVID-19. |
T10 | 369-546 | Sentence | denotes | CQ/HCQ were shown to prevent receptor recognition by coronaviruses, inhibit endosome acidification, which interferes with membrane fusion, and exhibit immunomodulatory activity. |