PMC:7441777 / 30042-30993
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7441777","sourcedb":"PMC","sourceid":"7441777","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7441777","text":"Table 4. Energetic components of the binding free energy of RdRp and natural polyphenols along with remdesivir complexes in kcal/mol. Data are represented as average ± SEM.\nComponents Remdesivir EGCG TF3 TF2b TF2a\nΔEvdW −31.85 ± 0.15 −25.11 ± 0.18 −37.82 ± 0.21 −30.66 ± 0.23 −22.55 ± 0.19\nΔEelec −98.40 ± 0.70 −69.38 ± 0.73 −123.63 ± 0.88 −47.18 ± 0.64 −95.28 ± 1.27\nΔGpol 109.97 ± 0.57 71.62 ± 0.48 124.47 ± 0.58 55.01 ± 0.49 94.94 ± 1.10\nΔGnp −4.29 ± 0.01 −4.15 ± 0.01 −5.29 ± 0.01 −3.91 ± 0.01 −4.28 ± 0.02\naΔGsolv 105.68 ± 0.57 67.47 ± 0.48 119.18 ± 0.58 51.1 ± 0.49 90.66 ± 1.10\nbΔGpol + elec 11.57 ± 0.90 2.24 ± 0.87 0.84 ± 1.05 7.83 ± 0.80 −0.34 ± 1.68\ncΔEMM −130.25 ± 0.71 −94.49 ± 0.75 −161.45 ± 0.90 −77.84 ± 0.68 −117.83 ± 1.28\nΔGbindSim −24.57 ± 0.91 −27.02 ± 0.89 −42.27 ± 1.07 −26.74 ± 0.83 −27.17 ± 1.69\na ΔGsolv = ΔGnp + ΔGpol,\nb ΔGpol + elec = ΔEelec + ΔGpol,\nc ΔEMM = ΔEvdW + ΔEelec.","divisions":[{"label":"label","span":{"begin":0,"end":8}},{"label":"caption","span":{"begin":10,"end":173}},{"label":"p","span":{"begin":10,"end":173}},{"label":"table","span":{"begin":174,"end":865}},{"label":"tr","span":{"begin":174,"end":219}},{"label":"th","span":{"begin":174,"end":184}},{"label":"th","span":{"begin":186,"end":196}},{"label":"th","span":{"begin":198,"end":202}},{"label":"th","span":{"begin":204,"end":207}},{"label":"th","span":{"begin":209,"end":213}},{"label":"th","span":{"begin":215,"end":219}},{"label":"tr","span":{"begin":220,"end":300}},{"label":"td","span":{"begin":220,"end":225}},{"label":"td","span":{"begin":227,"end":240}},{"label":"td","span":{"begin":242,"end":255}},{"label":"td","span":{"begin":257,"end":270}},{"label":"td","span":{"begin":272,"end":285}},{"label":"td","span":{"begin":287,"end":300}},{"label":"tr","span":{"begin":301,"end":383}},{"label":"td","span":{"begin":301,"end":307}},{"label":"td","span":{"begin":309,"end":322}},{"label":"td","span":{"begin":324,"end":337}},{"label":"td","span":{"begin":339,"end":353}},{"label":"td","span":{"begin":355,"end":368}},{"label":"td","span":{"begin":370,"end":383}},{"label":"tr","span":{"begin":384,"end":461}},{"label":"td","span":{"begin":384,"end":389}},{"label":"td","span":{"begin":391,"end":404}},{"label":"td","span":{"begin":406,"end":418}},{"label":"td","span":{"begin":420,"end":433}},{"label":"td","span":{"begin":435,"end":447}},{"label":"td","span":{"begin":449,"end":461}},{"label":"tr","span":{"begin":462,"end":536}},{"label":"td","span":{"begin":462,"end":466}},{"label":"td","span":{"begin":468,"end":480}},{"label":"td","span":{"begin":482,"end":494}},{"label":"td","span":{"begin":496,"end":508}},{"label":"td","span":{"begin":510,"end":522}},{"label":"td","span":{"begin":524,"end":536}},{"label":"tr","span":{"begin":537,"end":615}},{"label":"td","span":{"begin":537,"end":544}},{"label":"td","span":{"begin":546,"end":559}},{"label":"td","span":{"begin":561,"end":573}},{"label":"td","span":{"begin":575,"end":588}},{"label":"td","span":{"begin":590,"end":601}},{"label":"td","span":{"begin":603,"end":615}},{"label":"tr","span":{"begin":616,"end":696}},{"label":"td","span":{"begin":616,"end":629}},{"label":"td","span":{"begin":631,"end":643}},{"label":"td","span":{"begin":645,"end":656}},{"label":"td","span":{"begin":658,"end":669}},{"label":"td","span":{"begin":671,"end":682}},{"label":"td","span":{"begin":684,"end":696}},{"label":"tr","span":{"begin":697,"end":780}},{"label":"td","span":{"begin":697,"end":702}},{"label":"td","span":{"begin":704,"end":718}},{"label":"td","span":{"begin":720,"end":733}},{"label":"td","span":{"begin":735,"end":749}},{"label":"td","span":{"begin":751,"end":764}},{"label":"td","span":{"begin":766,"end":780}},{"label":"tr","span":{"begin":781,"end":865}},{"label":"td","span":{"begin":781,"end":790}},{"label":"td","span":{"begin":792,"end":805}},{"label":"td","span":{"begin":807,"end":820}},{"label":"td","span":{"begin":822,"end":835}},{"label":"td","span":{"begin":837,"end":850}},{"label":"td","span":{"begin":852,"end":865}},{"label":"footnote","span":{"begin":866,"end":891}},{"label":"label","span":{"begin":866,"end":868}},{"label":"p","span":{"begin":869,"end":891}},{"label":"footnote","span":{"begin":892,"end":925}},{"label":"label","span":{"begin":892,"end":894}},{"label":"p","span":{"begin":895,"end":925}},{"label":"label","span":{"begin":926,"end":928}}],"tracks":[{"project":"LitCovid-PD-CLO","denotations":[{"id":"T191","span":{"begin":537,"end":538},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T192","span":{"begin":616,"end":617},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"},{"id":"T193","span":{"begin":866,"end":867},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T194","span":{"begin":892,"end":893},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"}],"attributes":[{"subj":"T191","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T192","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T193","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T194","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T418","span":{"begin":78,"end":89},"obj":"Chemical"},{"id":"T419","span":{"begin":101,"end":111},"obj":"Chemical"},{"id":"T420","span":{"begin":198,"end":202},"obj":"Chemical"},{"id":"T421","span":{"begin":204,"end":207},"obj":"Chemical"}],"attributes":[{"id":"A418","pred":"chebi_id","subj":"T418","obj":"http://purl.obolibrary.org/obo/CHEBI_26195"},{"id":"A419","pred":"chebi_id","subj":"T419","obj":"http://purl.obolibrary.org/obo/CHEBI_145994"},{"id":"A420","pred":"chebi_id","subj":"T420","obj":"http://purl.obolibrary.org/obo/CHEBI_4806"},{"id":"A421","pred":"chebi_id","subj":"T421","obj":"http://purl.obolibrary.org/obo/CHEBI_136608"},{"subj":"T418","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T419","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T420","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T421","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"722","span":{"begin":209,"end":213},"obj":"Gene"},{"id":"723","span":{"begin":186,"end":196},"obj":"Chemical"},{"id":"727","span":{"begin":61,"end":65},"obj":"Gene"},{"id":"728","span":{"begin":78,"end":89},"obj":"Chemical"},{"id":"729","span":{"begin":101,"end":111},"obj":"Chemical"}],"attributes":[{"id":"A722","pred":"tao:has_database_id","subj":"722","obj":"Gene:2959"},{"id":"A723","pred":"tao:has_database_id","subj":"723","obj":"MESH:C000606551"},{"id":"A727","pred":"tao:has_database_id","subj":"727","obj":"Gene:43740578"},{"id":"A728","pred":"tao:has_database_id","subj":"728","obj":"MESH:D059808"},{"id":"A729","pred":"tao:has_database_id","subj":"729","obj":"MESH:C000606551"},{"subj":"722","pred":"source","obj":"LitCovid-PubTator"},{"subj":"723","pred":"source","obj":"LitCovid-PubTator"},{"subj":"727","pred":"source","obj":"LitCovid-PubTator"},{"subj":"728","pred":"source","obj":"LitCovid-PubTator"},{"subj":"729","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T282","span":{"begin":0,"end":8},"obj":"Sentence"},{"id":"T283","span":{"begin":10,"end":134},"obj":"Sentence"},{"id":"T284","span":{"begin":135,"end":173},"obj":"Sentence"},{"id":"T285","span":{"begin":174,"end":219},"obj":"Sentence"},{"id":"T286","span":{"begin":220,"end":300},"obj":"Sentence"},{"id":"T287","span":{"begin":301,"end":383},"obj":"Sentence"},{"id":"T288","span":{"begin":384,"end":461},"obj":"Sentence"},{"id":"T289","span":{"begin":462,"end":536},"obj":"Sentence"},{"id":"T290","span":{"begin":537,"end":615},"obj":"Sentence"},{"id":"T291","span":{"begin":616,"end":696},"obj":"Sentence"},{"id":"T292","span":{"begin":697,"end":780},"obj":"Sentence"},{"id":"T293","span":{"begin":781,"end":865},"obj":"Sentence"},{"id":"T294","span":{"begin":866,"end":891},"obj":"Sentence"},{"id":"T295","span":{"begin":892,"end":925},"obj":"Sentence"},{"id":"T296","span":{"begin":926,"end":951},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T282","pred":"source","obj":"LitCovid-sentences"},{"subj":"T283","pred":"source","obj":"LitCovid-sentences"},{"subj":"T284","pred":"source","obj":"LitCovid-sentences"},{"subj":"T285","pred":"source","obj":"LitCovid-sentences"},{"subj":"T286","pred":"source","obj":"LitCovid-sentences"},{"subj":"T287","pred":"source","obj":"LitCovid-sentences"},{"subj":"T288","pred":"source","obj":"LitCovid-sentences"},{"subj":"T289","pred":"source","obj":"LitCovid-sentences"},{"subj":"T290","pred":"source","obj":"LitCovid-sentences"},{"subj":"T291","pred":"source","obj":"LitCovid-sentences"},{"subj":"T292","pred":"source","obj":"LitCovid-sentences"},{"subj":"T293","pred":"source","obj":"LitCovid-sentences"},{"subj":"T294","pred":"source","obj":"LitCovid-sentences"},{"subj":"T295","pred":"source","obj":"LitCovid-sentences"},{"subj":"T296","pred":"source","obj":"LitCovid-sentences"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-CLO","color":"#e7ec93","default":true},{"id":"LitCovid-PD-CHEBI","color":"#d793ec"},{"id":"LitCovid-PubTator","color":"#93ecbd"},{"id":"LitCovid-sentences","color":"#eca393"}]}]}}