PMC:7441777 / 13257-13859
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T28 | 8-15 | Body_part | denotes | Protein | http://purl.org/sig/ont/fma/fma67257 |
| T29 | 69-76 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T30 | 288-295 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T91 | 101-102 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T218 | 8-15 | Chemical | denotes | Protein | http://purl.obolibrary.org/obo/CHEBI_16541 |
| T219 | 16-22 | Chemical | denotes | ligand | http://purl.obolibrary.org/obo/CHEBI_52214 |
| T220 | 69-76 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T221 | 77-83 | Chemical | denotes | ligand | http://purl.obolibrary.org/obo/CHEBI_52214 |
| T222 | 288-295 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T223 | 296-302 | Chemical | denotes | ligand | http://purl.obolibrary.org/obo/CHEBI_52214 |
| T224 | 406-414 | Chemical | denotes | hydrogen | http://purl.obolibrary.org/obo/CHEBI_49637 |
| T225 | 448-452 | Chemical | denotes | atom | http://purl.obolibrary.org/obo/CHEBI_33250 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 351 | 406-414 | Chemical | denotes | hydrogen | MESH:D006859 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T143 | 0-6 | Sentence | denotes | 2.1.4. |
| T144 | 8-35 | Sentence | denotes | Protein-ligand interactions |
| T145 | 36-219 | Sentence | denotes | LigPlot+ was used to investigate protein-ligand interactions for a given .pdb file containing the docked conformation and also the final simulated conformation (Wallace et al., 1995). |
| T146 | 220-315 | Sentence | denotes | The LigPlot+ program self-generated schematic 2D representations of protein-ligand interaction. |
| T147 | 316-469 | Sentence | denotes | The output file represents the intermolecular interactions and their strengths, including hydrogen bonds, hydrophobic contacts, and atom accessibilities. |
| T148 | 470-602 | Sentence | denotes | H-bonds are shown in green dotted lines, whereas residues involved in hydrophobic interaction are represented in the red semicircle. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32720577-7630882-56195104 | 213-217 | 7630882 | denotes | 1995 |