PMC:7435837 / 10720-11426
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T101 | 78-85 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T102 | 128-133 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T103 | 151-156 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T104 | 197-204 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T105 | 330-334 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T106 | 360-373 | Body_part | denotes | immune system | http://purl.org/sig/ont/fma/fma9825 |
| T107 | 522-529 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T108 | 607-612 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T109 | 678-685 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T8 | 360-373 | Body_part | denotes | immune system | http://purl.obolibrary.org/obo/UBERON_0002405 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T21 | 507-515 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T137 | 128-133 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T138 | 142-143 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T139 | 149-156 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T-cells |
| T140 | 322-323 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T141 | 328-334 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T-cell |
| T142 | 360-373 | http://purl.obolibrary.org/obo/UBERON_0002405 | denotes | immune system |
| T143 | 400-401 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T144 | 605-612 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T-cells |
| T145 | 620-621 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T103 | 78-85 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T104 | 197-204 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T105 | 205-212 | Chemical | denotes | epitope | http://purl.obolibrary.org/obo/CHEBI_53000 |
| T106 | 281-289 | Chemical | denotes | antigens | http://purl.obolibrary.org/obo/CHEBI_59132 |
| T107 | 522-529 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T108 | 678-685 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14 | 634-649 | http://purl.obolibrary.org/obo/GO_0006955 | denotes | immune response |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 238 | 672-677 | Gene | denotes | spike | Gene:43740568 |
| 239 | 516-521 | Gene | denotes | spike | Gene:43740568 |
| 240 | 191-196 | Gene | denotes | spike | Gene:43740568 |
| 241 | 72-77 | Gene | denotes | spike | Gene:43740568 |
| 242 | 377-390 | Species | denotes | coronaviruses | Tax:11118 |
| 243 | 507-515 | Species | denotes | SARS-CoV | Tax:694009 |
| 244 | 536-546 | Species | denotes | adenovirus | Tax:10508 |
| 245 | 565-575 | Species | denotes | adenovirus | Tax:10508 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T82 | 0-157 | Sentence | denotes | Therefore, one of the most promising targets is the characterization of spike protein epitopes that can be recognized by immune cells such as B- and T-cells. |
| T83 | 158-399 | Sentence | denotes | Some form of replication of this spike protein epitope should, therefore, be developed and this will hopefully provide the antigens which can bind to, for example, B- or T-cell antibodies and alert the immune system to coronaviruses [44,45]. |
| T84 | 400-547 | Sentence | denotes | A recombinant vaccination approach could be demonstrated by expressing the receptor-binding domain [46] of SARS-CoV spike protein in an adenovirus. |
| T85 | 548-706 | Sentence | denotes | This recombinant adenovirus was administered nasally and T-cells showed a significant immune response towards the expressed spike protein-binding domain [47]. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32731428-32094589-71421283 | 392-394 | 32094589 | denotes | 44 |
| 32731428-25810418-71421284 | 395-397 | 25810418 | denotes | 45 |
| 32731428-26935699-71421285 | 500-502 | 26935699 | denotes | 46 |
| 32731428-18178835-71421286 | 702-704 | 18178835 | denotes | 47 |