
PMC:7417788 / 69435-70098
Annnotations
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1467 | 24-29 | GO:0007568 | denotes | aging |
T1468 | 33-44 | CL:0000080 | denotes | circulating |
T1469 | 45-51 | UBERON:0002405;CL:0000738 | denotes | immune |
T1470 | 52-57 | CL:0000738 | denotes | cells |
T1471 | 82-87 | SO:0000704 | denotes | genes |
T1472 | 117-122 | SO:0000704 | denotes | genes |
T1473 | 130-136 | UBERON:0002405;CL:0000738 | denotes | immune |
T1474 | 137-142 | CL:0000738 | denotes | cells |
T1475 | 144-149 | GO:0007568 | denotes | Aging |
T1476 | 230-240 | GO:0010467 | denotes | expression |
T1477 | 248-253 | SO:0000704 | denotes | genes |
T1478 | 280-285 | GO:0007568 | denotes | aging |
T1479 | 294-300 | UBERON:0002405;CL:0000738 | denotes | immune |
T1480 | 301-305 | CL:0000738 | denotes | cell |
T1481 | 349-354 | GO:0007568 | denotes | aging |
T1482 | 460-465 | GO:0007568 | denotes | aging |
T1483 | 466-470 | SO:0000704 | denotes | gene |
T1484 | 560-565 | GO:0007568 | denotes | aging |
T1485 | 566-571 | SO:0000704 | denotes | genes |
T1486 | 572-581 | GO:0010467 | denotes | expressed |
T1487 | 623-632 | GO:0010467 | denotes | expressed |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T496 | 52-57 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T497 | 137-142 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T498 | 180-185 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T499 | 301-305 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T500 | 365-370 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T501 | 375-379 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T502 | 466-470 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
T503 | 488-492 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T504 | 587-591 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T505 | 638-642 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1139 | 52-57 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T1140 | 82-87 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | genes |
T1141 | 117-122 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | genes |
T1142 | 137-142 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T1143 | 180-185 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T1144 | 248-253 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | genes |
T1145 | 301-311 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cell types |
T1146 | 365-370 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T1147 | 375-379 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T1148 | 466-470 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
T1149 | 488-492 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T1150 | 566-571 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | genes |
T1151 | 587-591 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T1152 | 638-642 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T303 | 24-29 | http://purl.obolibrary.org/obo/GO_0007568 | denotes | aging |
T304 | 144-149 | http://purl.obolibrary.org/obo/GO_0007568 | denotes | Aging |
T305 | 280-285 | http://purl.obolibrary.org/obo/GO_0007568 | denotes | aging |
T306 | 349-354 | http://purl.obolibrary.org/obo/GO_0007568 | denotes | aging |
T307 | 460-465 | http://purl.obolibrary.org/obo/GO_0007568 | denotes | aging |
T308 | 560-565 | http://purl.obolibrary.org/obo/GO_0007568 | denotes | aging |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T389 | 0-143 | Sentence | denotes | To assess the impact of aging in circulating immune cells, we selected the top 20 genes out of 60 common upregulated genes in all immune cells. |
T390 | 144-266 | Sentence | denotes | Aging scores were estimated for all cells as the average of the scaled (Z-normalized) expression of the genes in the list. |
T391 | 267-395 | Sentence | denotes | The score of aging for all immune cell types can be used to predict the effect of aging on single cells and cell subtype levels. |
T392 | 396-663 | Sentence | denotes | Calculation of the scores was done as follows: the score of the aging gene set in the given cell-subset (named as X) was computed as the sum of all UMI for all the aging genes expressed in X cell, divided by the sum of all UMI expressed by X cell (Pont et al., 2019). |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32780218-29891535-132718730 | 657-661 | 29891535 | denotes | 2019 |