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PMC:7417788 / 62018-62905 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T1389 112-115 CHEBI:37958;CHEBI:37958 denotes dye
T1390 274-284 GO:0042571 denotes antibodies
T1391 311-321 GO:0042571 denotes antibodies
T1392 366-370 PR:000001002 denotes CD19
T1393 371-374 PR:000004122 denotes APC
T1394 400-404 PR:000001173 denotes CD88
T1395 437-441 PR:000001857 denotes CD89
T1396 473-476 PR:000029150 denotes HLA
T1397 480-484 CHEBI:37926;CHEBI:37926 denotes FITC
T1398 510-515 PR:000001013 denotes CD11c
T1399 560-563 CHEBI:37989;CHEBI:37989 denotes Cy5
T1400 573-576 UBERON:0004356 denotes AER
T1401 593-597 PR:000002027 denotes CD1c
T1402 629-634 PR:000001324 denotes CD147

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T447 250-255 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T448 473-476 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T135 651-653 Disease denotes BD http://purl.obolibrary.org/obo/MONDO_0007191
T136 769-771 Disease denotes BD http://purl.obolibrary.org/obo/MONDO_0007191
T137 782-784 Disease denotes BD http://purl.obolibrary.org/obo/MONDO_0007191

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1062 132-136 http://purl.obolibrary.org/obo/CLO_0001387 denotes 4 °C
T1063 226-228 http://purl.obolibrary.org/obo/CLO_0009877 denotes NY
T1064 250-255 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T1065 299-303 http://purl.obolibrary.org/obo/CLO_0001387 denotes 4 °C
T1066 332-335 http://purl.obolibrary.org/obo/CLO_0052882 denotes CD3
T1067 332-335 http://purl.obolibrary.org/obo/CLO_0053434 denotes CD3
T1068 366-370 http://purl.obolibrary.org/obo/CLO_0053432 denotes CD19
T1069 419-421 http://purl.obolibrary.org/obo/CLO_0008933 denotes S5
T1070 492-496 http://purl.obolibrary.org/obo/CLO_0007180 denotes L243
T1071 510-515 http://purl.obolibrary.org/obo/PR_000001013 denotes CD11c
T1072 546-548 http://purl.obolibrary.org/obo/CLO_0052676 denotes Fc

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T98657 44-53 Chemical denotes phosphate http://purl.obolibrary.org/obo/CHEBI_18367|http://purl.obolibrary.org/obo/CHEBI_26020|http://purl.obolibrary.org/obo/CHEBI_35780|http://purl.obolibrary.org/obo/CHEBI_43474
T60012 112-115 Chemical denotes dye http://purl.obolibrary.org/obo/CHEBI_37958
T5861 226-228 Chemical denotes NY http://purl.obolibrary.org/obo/CHEBI_73427
T75437 371-374 Chemical denotes APC http://purl.obolibrary.org/obo/CHEBI_80551
T20098 405-407 Chemical denotes PE http://purl.obolibrary.org/obo/CHEBI_16038|http://purl.obolibrary.org/obo/CHEBI_17553|http://purl.obolibrary.org/obo/CHEBI_74762
T92 419-421 Chemical denotes S5 http://purl.obolibrary.org/obo/CHEBI_29386
T95897 442-444 Chemical denotes PE http://purl.obolibrary.org/obo/CHEBI_16038|http://purl.obolibrary.org/obo/CHEBI_17553|http://purl.obolibrary.org/obo/CHEBI_74762
T65030 477-479 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T97 480-484 Chemical denotes FITC http://purl.obolibrary.org/obo/CHEBI_37926
T20259 635-637 Chemical denotes PE http://purl.obolibrary.org/obo/CHEBI_16038|http://purl.obolibrary.org/obo/CHEBI_17553|http://purl.obolibrary.org/obo/CHEBI_74762
T74014 684-686 Chemical denotes PE http://purl.obolibrary.org/obo/CHEBI_16038|http://purl.obolibrary.org/obo/CHEBI_17553|http://purl.obolibrary.org/obo/CHEBI_74762

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T342 0-24 Sentence denotes Flow cytometric analysis
T343 25-235 Sentence denotes PBMCs suspended in phosphate buffered saline (PBS) were cultured with Live/Dead yellow dye (Invitrogen) at 4 °C for 30 min and then washed once with 1 mL of PBS containing 1% FBS (GIBCO, Grand Island, NY, USA).
T344 236-304 Sentence denotes Subsequently, cells were treated with antibodies for 30 min at 4 °C.
T345 305-711 Sentence denotes These antibodies included: CD3-BV785 (clone SK7, Biolegend), CD19-APC (clone HB19, Biolegend), CD88-PE/Cy7 (clone S5/1, Biolegend), CD89-PE/Cy7 (clone A59, Biolegend), HLA-DR-FITC (clone L243, Biolegend), CD11c-BV421 (clone 3.9, Biolegend), FcεRIa- PercP/Cy5.5 (clone AER-37, Biolegend), CD1c-BV650 (clone L161, Biolegend), CD147-PE (clone HIM6, BD biosciences), CD371 (CLEC12A)-PE (clone 50C1, Biolegend).
T346 712-887 Sentence denotes Analysis of PBMCs with flow cytometry was conducted with BD Fortessa (BD Biosciences) and the results were evaluated with FlowJo (version 10.0.7, Tree Star, Ashland, OR, USA).

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1395 366-370 Gene denotes CD19 Gene:930
1396 400-404 Gene denotes CD88 Gene:728
1397 437-441 Gene denotes CD89 Gene:2204
1398 510-515 Gene denotes CD11c Gene:3687
1399 593-597 Gene denotes CD1c Gene:911
1400 629-634 Gene denotes CD147 Gene:682
1401 668-673 Gene denotes CD371 Gene:160364
1402 675-682 Gene denotes CLEC12A Gene:160364
1403 44-69 Chemical denotes phosphate buffered saline
1404 71-74 Chemical denotes PBS
1405 182-185 Chemical denotes PBS
1406 200-203 Disease denotes FBS MESH:D005198
1407 371-374 Disease denotes APC MESH:D011125
1408 546-552 Disease denotes FcεRIa
1409 336-341 CellLine denotes BV785 CVCL:N487
1410 349-352 CellLine denotes SK7 CVCL:L697
1411 516-521 CellLine denotes BV421 CVCL:0182