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PMC:7417788 / 44994-46813 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T971 10-20 SP_7 denotes SARS-CoV-2
T972 132-142 GO:0010467 denotes expression
T973 152-158 UBERON:0002405;CL:0000738 denotes immune
T974 159-163 CL:0000738 denotes cell
T975 295-305 GO:0010467 denotes Expression
T976 406-409 GO:0005675 denotes MFI
T977 413-418 PR:000001324 denotes CD147
T978 419-429 GO:0010467 denotes expression
T979 438-445 CL:0000084 denotes T cells
T980 447-450 GO:0005675 denotes MFI
T981 532-538 UBERON:0002405;CL:0000738 denotes immune
T982 539-543 CL:0000738 denotes cell
T983 727-734 CL:0000084 denotes T cells
T984 916-925 CL:0000576 denotes monocytes
T985 1059-1066 CL:0000084 denotes T cells
T986 1255-1264 CL:0000576 denotes monocytes
T987 1441-1451 GO:0010467 denotes expression
T988 1473-1478 GO:0007568 denotes aging
T989 1510-1515 SO:0000704 denotes genes
T990 1519-1526 CL:0000084 denotes T cells
T991 1571-1581 GO:0010467 denotes expression
T992 1603-1608 GO:0007568 denotes aging
T993 1640-1645 SO:0000704 denotes genes
T994 1649-1658 CL:0000576 denotes monocytes
T995 1753-1757 UBERON:0002048 denotes Lung
T996 1811-1819 SP_7 denotes COVID-19

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T337 159-163 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T338 342-346 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T339 440-445 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T340 539-543 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T341 729-734 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T342 916-925 Body_part denotes monocytes http://purl.org/sig/ont/fma/fma62864
T343 1061-1066 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T344 1255-1264 Body_part denotes monocytes http://purl.org/sig/ont/fma/fma62864
T345 1521-1526 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T346 1649-1658 Body_part denotes monocytes http://purl.org/sig/ont/fma/fma62864
T347 1753-1757 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T20 1753-1757 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T81 10-18 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T82 21-30 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T83 1811-1819 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T800 88-89 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T801 159-163 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T802 240-246 http://purl.obolibrary.org/obo/UBERON_0002415 denotes tailed
T803 269-274 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T804 292-293 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T805 342-352 http://purl.obolibrary.org/obo/CL_0000000 denotes cell types
T806 433-436 http://purl.obolibrary.org/obo/CLO_0052882 denotes CD3
T807 433-436 http://purl.obolibrary.org/obo/CLO_0053434 denotes CD3
T808 438-445 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T809 539-543 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T810 727-734 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T811 916-925 http://purl.obolibrary.org/obo/CL_0000576 denotes monocytes
T812 1059-1066 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T813 1126-1127 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T814 1155-1159 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T815 1255-1264 http://purl.obolibrary.org/obo/CL_0000576 denotes monocytes
T816 1324-1325 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T817 1353-1357 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T818 1510-1515 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T819 1519-1526 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T820 1640-1645 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T821 1649-1658 http://purl.obolibrary.org/obo/CL_0000576 denotes monocytes
T822 1753-1757 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T823 1753-1757 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T355 183-185 Chemical denotes AH http://purl.obolibrary.org/obo/CHEBI_73771
T356 186-191 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T357 204-206 Chemical denotes YH http://purl.obolibrary.org/obo/CHEBI_73695
T358 207-212 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T359 356-358 Chemical denotes YH http://purl.obolibrary.org/obo/CHEBI_73695
T360 363-365 Chemical denotes AH http://purl.obolibrary.org/obo/CHEBI_73771
T361 587-589 Chemical denotes YH http://purl.obolibrary.org/obo/CHEBI_73695
T362 591-593 Chemical denotes AH http://purl.obolibrary.org/obo/CHEBI_73771
T363 602-607 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T364 628-633 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T365 743-745 Chemical denotes YH http://purl.obolibrary.org/obo/CHEBI_73695
T366 750-752 Chemical denotes AH http://purl.obolibrary.org/obo/CHEBI_73771
T367 753-758 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T368 768-770 Chemical denotes YH http://purl.obolibrary.org/obo/CHEBI_73695
T369 771-776 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T370 786-788 Chemical denotes AH http://purl.obolibrary.org/obo/CHEBI_73771
T371 789-794 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T372 934-936 Chemical denotes AH http://purl.obolibrary.org/obo/CHEBI_73771
T373 941-943 Chemical denotes YH http://purl.obolibrary.org/obo/CHEBI_73695
T374 960-962 Chemical denotes YH http://purl.obolibrary.org/obo/CHEBI_73695
T375 979-981 Chemical denotes AH http://purl.obolibrary.org/obo/CHEBI_73771
T376 1531-1536 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T377 1663-1668 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T213 0-5 http://purl.obolibrary.org/obo/GO_0007568 denotes Aging
T214 1473-1478 http://purl.obolibrary.org/obo/GO_0007568 denotes aging
T215 1603-1608 http://purl.obolibrary.org/obo/GO_0007568 denotes aging

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T228 214-446 Sentence denotes P values are based on two-tailed Mann-Whitney-Wilcoxon tests between groups. (B) Expression levels of BSG and ANPEP in specific cell types in YH and AH groups. (C) Recapitulative graph of the MFI of CD147 expression in CD3+ T cells.
T229 447-795 Sentence denotes MFI, mean fluorescence intensity. (D) Bar charts of the relative percentage of major immune cell populations derived from scRNA-seq data in YH, AH and ACR group (left), YCR and ACR group (right). (E) Venn diagram showing the integrated comparative analysis of upregulated DEGs in T cells between YH and AH group, YCR and YH group, ACR and AH group.
T230 796-989 Sentence denotes The count shows the number of DEGs. (F) Venn diagram showing the integrated comparative analysis of upregulated DEGs in monocytes between AH and YH groups, YCR and YH groups, ACR and AH groups.
T231 990-1094 Sentence denotes The count shows the number of DEGs. (G) Volcano plot showing DEGs in T cells between YCR and ACR groups.
T232 1095-1292 Sentence denotes P values were calculated using a paired, two-sided Wilcoxon test and FDR was corrected using the Benjamini-Hochberg procedure. (H) Volcano plot showing DEGs in monocytes between YCR and ACR groups.
T233 1293-1819 Sentence denotes P values were calculated using a paired, two-sided Wilcoxon test and FDR was corrected using the Benjamini-Hochberg procedure. (I) Dot plot showing expression levels of the top 20 aging-induced and disease-associated genes in T cells per group in cohort-3. (J) Dot plot showing expression levels of the top 20 aging-induced and disease-associated genes in monocytes per group in cohort-3. (K) CT photography showing the different manifestation of evolution of Lung Ground-Glass Opacity in young and aged patients with COVID-19

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
929 126-131 Gene denotes ANPEP Gene:290
930 324-329 Gene denotes ANPEP Gene:290
931 413-418 Gene denotes CD147 Gene:682
932 1797-1805 Species denotes patients Tax:9606
933 10-30 Disease denotes SARS-CoV-2 infection MESH:C000657245
934 183-185 Disease denotes AH MESH:D007039
935 363-365 Disease denotes AH MESH:D007039
936 591-593 Disease denotes AH MESH:D007039
937 750-752 Disease denotes AH MESH:D007039
938 786-788 Disease denotes AH MESH:D007039
939 934-936 Disease denotes AH MESH:D007039
940 979-981 Disease denotes AH MESH:D007039
941 1811-1819 Disease denotes COVID-19 MESH:C000657245