PMC:7417187 / 6150-7262
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T11 | 76-81 | Body_part | denotes | spine | http://purl.org/sig/ont/fma/fma13478 |
| T12 | 241-252 | Body_part | denotes | spinal cord | http://purl.org/sig/ont/fma/fma7647 |
| T13 | 315-320 | Body_part | denotes | spine | http://purl.org/sig/ont/fma/fma13478 |
| T14 | 346-357 | Body_part | denotes | spinal cord | http://purl.org/sig/ont/fma/fma7647 |
| T15 | 488-493 | Body_part | denotes | spine | http://purl.org/sig/ont/fma/fma13478 |
| T16 | 505-516 | Body_part | denotes | spinal cord | http://purl.org/sig/ont/fma/fma7647 |
| T17 | 884-903 | Body_part | denotes | ligamentous complex | http://purl.org/sig/ont/fma/fma0327866 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T7 | 219-228 | Body_part | denotes | vertebral | http://purl.obolibrary.org/obo/UBERON_3010224 |
| T8 | 241-252 | Body_part | denotes | spinal cord | http://purl.obolibrary.org/obo/UBERON_0002240 |
| T9 | 346-357 | Body_part | denotes | spinal cord | http://purl.obolibrary.org/obo/UBERON_0002240 |
| T10 | 437-442 | Body_part | denotes | facet | http://purl.obolibrary.org/obo/UBERON_4300038 |
| T11 | 505-516 | Body_part | denotes | spinal cord | http://purl.obolibrary.org/obo/UBERON_0002240 |
| T12 | 675-680 | Body_part | denotes | scale | http://purl.obolibrary.org/obo/UBERON_0002542 |
| T13 | 1088-1097 | Body_part | denotes | vertebral | http://purl.obolibrary.org/obo/UBERON_3010224 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T43 | 229-237 | Disease | denotes | fracture | http://purl.obolibrary.org/obo/MONDO_0005315 |
| T44 | 346-364 | Disease | denotes | spinal cord injury | http://purl.obolibrary.org/obo/MONDO_0043797 |
| T45 | 358-364 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
| T46 | 366-369 | Disease | denotes | SCI | http://purl.obolibrary.org/obo/MONDO_0043797 |
| T47 | 372-388 | Disease | denotes | epidural abscess | http://purl.obolibrary.org/obo/MONDO_0005752 |
| T48 | 381-388 | Disease | denotes | abscess | http://purl.obolibrary.org/obo/MONDO_0005227 |
| T49 | 494-516 | Disease | denotes | tumor with spinal cord | http://purl.obolibrary.org/obo/MONDO_0021234 |
| T50 | 494-499 | Disease | denotes | tumor | http://purl.obolibrary.org/obo/MONDO_0005070 |
| T51 | 543-551 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T52 | 631-644 | Disease | denotes | Spinal Injury | http://purl.obolibrary.org/obo/MONDO_0037747 |
| T53 | 742-745 | Disease | denotes | SCI | http://purl.obolibrary.org/obo/MONDO_0043797 |
| T54 | 765-771 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
| T55 | 845-851 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T47 | 167-170 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T48 | 219-228 | http://purl.obolibrary.org/obo/NCBITaxon_7742 | denotes | vertebral |
| T49 | 241-252 | http://purl.obolibrary.org/obo/UBERON_0002240 | denotes | spinal cord |
| T50 | 346-357 | http://purl.obolibrary.org/obo/UBERON_0002240 | denotes | spinal cord |
| T51 | 462-468 | http://purl.obolibrary.org/obo/NCBITaxon_9796 | denotes | equine |
| T52 | 505-516 | http://purl.obolibrary.org/obo/UBERON_0002240 | denotes | spinal cord |
| T53 | 874-883 | http://purl.obolibrary.org/obo/UBERON_0001353 | denotes | posterior |
| T54 | 884-895 | http://purl.obolibrary.org/obo/UBERON_0000211 | denotes | ligamentous |
| T55 | 1088-1097 | http://purl.obolibrary.org/obo/NCBITaxon_7742 | denotes | vertebral |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 125 | 4-12 | Species | denotes | patients | Tax:9606 |
| 126 | 190-198 | Species | denotes | patients | Tax:9606 |
| 127 | 462-468 | Species | denotes | equine | Tax:9796 |
| 128 | 552-560 | Species | denotes | patients | Tax:9606 |
| 129 | 936-943 | Species | denotes | patient | Tax:9606 |
| 130 | 219-237 | Disease | denotes | vertebral fracture | MESH:D050723 |
| 131 | 346-364 | Disease | denotes | spinal cord injury | MESH:D013119 |
| 132 | 390-407 | Disease | denotes | epidural hematoma | MESH:D046748 |
| 133 | 494-499 | Disease | denotes | tumor | MESH:D009369 |
| 134 | 543-551 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 135 | 631-644 | Disease | denotes | Spinal Injury | MESH:D013124 |
| 136 | 732-745 | Disease | denotes | traumatic SCI | MESH:D014947 |
| 137 | 1088-1107 | Disease | denotes | vertebral fractures | MESH:D050723 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T42 | 0-185 | Sentence | denotes | The patients participating are also part of an ongoing prospective study on spine injuries at the authors' institute for which institutional ethics committee approval has been obtained. |
| T43 | 186-310 | Sentence | denotes | All patients admitted either for vertebral fracture or spinal cord compression from February 2020 to May 2020 were included. |
| T44 | 311-539 | Sentence | denotes | The spine conditions included were spinal cord injury (SCI), epidural abscess, epidural hematoma, close reduction of cervical facet dislocation, cauda equine syndrome, surgical spine tumor with spinal cord compression (Table 1). |
| T45 | 540-574 | Sentence | denotes | No COVID-19 patients were treated. |
| T46 | 575-750 | Sentence | denotes | The neurological status was assessed using the American Spinal Injury Association (ASIA) impairment scale as it can be used for traumatic [5] as well as non-traumatic SCI [6]. |
| T47 | 751-1112 | Sentence | denotes | Thoracolumbar injury classification and severity score (TLICS) based on the morphology of the injury, the integrity of the posterior ligamentous complex, and neurological status of the patient was performed in which points are assigned for each category and the final total points suggest the possible treatment option for thoracolumbar vertebral fractures [7]. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T5 | 241-264 | Phenotype | denotes | spinal cord compression | http://purl.obolibrary.org/obo/HP_0002176 |
| T6 | 381-388 | Phenotype | denotes | abscess | http://purl.obolibrary.org/obo/HP_0025615 |
| T7 | 390-407 | Phenotype | denotes | epidural hematoma | http://purl.obolibrary.org/obo/HP_0100310 |
| T8 | 494-499 | Phenotype | denotes | tumor | http://purl.obolibrary.org/obo/HP_0002664 |
| T9 | 505-528 | Phenotype | denotes | spinal cord compression | http://purl.obolibrary.org/obo/HP_0002176 |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T51 | 76-81 | UBERON:0001130 | denotes | spine |
| T52 | 219-228 | UBERON:3010224 | denotes | vertebral |
| T53 | 241-252 | UBERON:0002240 | denotes | spinal cord |
| T54 | 315-320 | UBERON:0001130 | denotes | spine |
| T55 | 346-357 | UBERON:0002240 | denotes | spinal cord |
| T56 | 372-380 | UBERON:0007376 | denotes | epidural |
| T57 | 390-398 | UBERON:0007376 | denotes | epidural |
| T58 | 428-436 | UBERON:0005434 | denotes | cervical |
| T59 | 437-442 | UBERON:0001456 | denotes | facet |
| T60 | 456-461 | UBERON:0001873 | denotes | cauda |
| T61 | 488-493 | UBERON:0002240 | denotes | spine |
| T62 | 505-516 | UBERON:0002240 | denotes | spinal cord |
| T63 | 543-551 | SP_7 | denotes | COVID-19 |
| T64 | 579-591 | UBERON:0001016 | denotes | neurological |
| T65 | 631-637 | UBERON:0001130 | denotes | Spinal |
| T66 | 751-764 | UBERON:0000915 | denotes | Thoracolumbar |
| T67 | 884-895 | UBERON:0000211 | denotes | ligamentous |
| T68 | 909-921 | UBERON:0001016 | denotes | neurological |
| T69 | 1074-1087 | UBERON:0000915 | denotes | thoracolumbar |
| T70 | 1088-1097 | UBERON:3010224 | denotes | vertebral |
| T53322 | 76-81 | UBERON:0001130 | denotes | spine |
| T77106 | 219-228 | UBERON:3010224 | denotes | vertebral |
| T12920 | 241-252 | UBERON:0002240 | denotes | spinal cord |
| T67226 | 315-320 | UBERON:0001130 | denotes | spine |
| T44798 | 346-357 | UBERON:0002240 | denotes | spinal cord |
| T44958 | 372-380 | UBERON:0007376 | denotes | epidural |
| T65524 | 390-398 | UBERON:0007376 | denotes | epidural |
| T47717 | 428-436 | UBERON:0005434 | denotes | cervical |
| T64332 | 437-442 | UBERON:0001456 | denotes | facet |
| T69789 | 456-461 | UBERON:0001873 | denotes | cauda |
| T44272 | 488-493 | UBERON:0002240 | denotes | spine |
| T29158 | 505-516 | UBERON:0002240 | denotes | spinal cord |
| T31014 | 543-551 | SP_7 | denotes | COVID-19 |
| T43695 | 579-591 | UBERON:0001016 | denotes | neurological |
| T509 | 631-637 | UBERON:0001130 | denotes | Spinal |
| T37169 | 751-764 | UBERON:0000915 | denotes | Thoracolumbar |
| T48287 | 884-895 | UBERON:0000211 | denotes | ligamentous |
| T63285 | 909-921 | UBERON:0001016 | denotes | neurological |
| T15405 | 1074-1087 | UBERON:0000915 | denotes | thoracolumbar |
| T55985 | 1088-1097 | UBERON:3010224 | denotes | vertebral |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32789084-30531653-23840886 | 714-715 | 30531653 | denotes | 5 |
| 32789084-18936767-23840887 | 747-748 | 18936767 | denotes | 6 |
| 32789084-16307197-23840888 | 1109-1110 | 16307197 | denotes | 7 |