PMC:7405836 / 71338-73109
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T238 | 922-928 | Body_part | denotes | stools | http://purl.org/sig/ont/fma/fma64183 |
| T239 | 1117-1121 | Body_part | denotes | hand | http://purl.org/sig/ont/fma/fma9712 |
| T240 | 1529-1532 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T241 | 1670-1673 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T88 | 922-928 | Body_part | denotes | stools | http://purl.obolibrary.org/obo/UBERON_0001988 |
| T89 | 1117-1121 | Body_part | denotes | hand | http://purl.obolibrary.org/obo/UBERON_0002398 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T667 | 16-24 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T668 | 16-20 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T669 | 281-289 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T670 | 281-285 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T671 | 372-380 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T672 | 372-376 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T673 | 487-495 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T674 | 487-491 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T675 | 584-592 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T676 | 584-588 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T677 | 955-963 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T678 | 955-959 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T679 | 1293-1301 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T680 | 1293-1297 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T681 | 1659-1667 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T682 | 1659-1663 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T683 | 1695-1703 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T696 | 44-47 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T697 | 343-346 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T698 | 498-501 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T699 | 740-745 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T700 | 1316-1324 | http://purl.obolibrary.org/obo/CLO_0009985 | denotes | focusing |
| T701 | 1377-1382 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T57355 | 747-754 | Chemical | denotes | Ethanol | http://purl.obolibrary.org/obo/CHEBI_16236 |
| T68693 | 759-772 | Chemical | denotes | disinfectants | http://purl.obolibrary.org/obo/CHEBI_48219 |
| T79466 | 784-792 | Chemical | denotes | chlorine | http://purl.obolibrary.org/obo/CHEBI_23116|http://purl.obolibrary.org/obo/CHEBI_29310 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T49 | 207-216 | http://purl.obolibrary.org/obo/GO_0007588 | denotes | excretion |
| T50 | 333-342 | http://purl.obolibrary.org/obo/GO_0007588 | denotes | excretion |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T511 | 0-83 | Sentence | denotes | The presence of SARS-CoV-2 in fecal samples has posed grave public health concerns. |
| T512 | 84-326 | Sentence | denotes | In addition to the direct transmission mainly occurring via droplets of sneezing and coughing, other routes, such as fecal excretion and environmental and fomite contamination, are contributing to SARS-CoV-2 transmission and spread (249–252). |
| T513 | 327-480 | Sentence | denotes | Fecal excretion has also been documented for SARS-CoV and MERS-CoV, along with the potential to stay viable in situations aiding fecal-oral transmission. |
| T514 | 481-556 | Sentence | denotes | Thus, SARS-CoV-2 has every possibility to be transmitted through this mode. |
| T515 | 557-746 | Sentence | denotes | Fecal-oral transmission of SARS-CoV-2, particularly in regions having low standards of hygiene and poor sanitation, may have grave consequences with regard to the high spread of this virus. |
| T516 | 747-849 | Sentence | denotes | Ethanol and disinfectants containing chlorine or bleach are effective against coronaviruses (249–252). |
| T517 | 850-966 | Sentence | denotes | Appropriate precautions need to be followed strictly while handling the stools of patients infected with SARS-CoV-2. |
| T518 | 967-1078 | Sentence | denotes | Biowaste materials and sewage from hospitals must be adequately disinfected, treated, and disposed of properly. |
| T519 | 1079-1196 | Sentence | denotes | The significance of frequent and good hand hygiene and sanitation practices needs to be given due emphasis (249–252). |
| T520 | 1197-1479 | Sentence | denotes | Future explorative research needs to be conducted with regard to the fecal-oral transmission of SARS-CoV-2, along with focusing on environmental investigations to find out if this virus could stay viable in situations and atmospheres facilitating such potent routes of transmission. |
| T521 | 1480-1771 | Sentence | denotes | The correlation of fecal concentrations of viral RNA with disease severity needs to be determined, along with assessing the gastrointestinal symptoms and the possibility of fecal SARS-CoV-2 RNA detection during the COVID-19 incubation period or convalescence phases of the disease (249–252). |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T62 | 169-177 | Phenotype | denotes | coughing | http://purl.obolibrary.org/obo/HP_0012735 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 2125 | 16-26 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 2126 | 281-291 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 2127 | 372-380 | Species | denotes | SARS-CoV | Tax:694009 |
| 2128 | 385-393 | Species | denotes | MERS-CoV | Tax:1335626 |
| 2129 | 487-497 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 2130 | 584-594 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 2131 | 825-838 | Species | denotes | coronaviruses | Tax:11118 |
| 2132 | 932-940 | Species | denotes | patients | Tax:9606 |
| 2133 | 955-965 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 2134 | 1293-1303 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 2135 | 1659-1669 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 2136 | 747-754 | Chemical | denotes | Ethanol | MESH:D000431 |
| 2137 | 784-792 | Chemical | denotes | chlorine | MESH:D002713 |
| 2138 | 796-802 | Chemical | denotes | bleach | |
| 2139 | 169-177 | Disease | denotes | coughing | MESH:D003371 |
| 2140 | 201-216 | Disease | denotes | fecal excretion | |
| 2141 | 941-949 | Disease | denotes | infected | MESH:D007239 |
| 2142 | 1604-1629 | Disease | denotes | gastrointestinal symptoms | MESH:D012817 |
| 2143 | 1695-1703 | Disease | denotes | COVID-19 | MESH:C000657245 |