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PMC:7405836 / 53764-54786 JSONTXT

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LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T52 213-218 Body_part denotes scale http://purl.obolibrary.org/obo/UBERON_0002542
T53 905-911 Body_part denotes vessel http://purl.obolibrary.org/obo/UBERON_0000055

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T505 6-20 Disease denotes acute diarrhea http://purl.obolibrary.org/obo/MONDO_0000257
T506 12-20 Disease denotes diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T507 43-47 Disease denotes SADS http://purl.obolibrary.org/obo/MONDO_0000694|http://purl.obolibrary.org/obo/MONDO_0054866
T509 108-117 Disease denotes enteritis http://purl.obolibrary.org/obo/MONDO_0043579
T510 537-541 Disease denotes SADS http://purl.obolibrary.org/obo/MONDO_0000694|http://purl.obolibrary.org/obo/MONDO_0054866
T512 611-615 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T513 916-925 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T514 990-1005 Disease denotes avian influenza http://purl.obolibrary.org/obo/MONDO_0018695
T515 996-1005 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T526 294-299 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T527 396-399 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T528 451-452 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T529 453-456 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T530 475-480 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T531 701-704 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T532 751-754 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T533 905-911 http://purl.obolibrary.org/obo/UBERON_0000055 denotes vessel
T534 926-927 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T535 928-935 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T536 980-985 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T537 1006-1007 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T538 1008-1015 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T361 0-166 Sentence denotes Swine acute diarrhea syndrome coronavirus (SADS-CoV) was first identified in suckling piglets having severe enteritis and belongs to the genus Alphacoronavirus (106).
T362 167-289 Sentence denotes The outbreak was associated with considerable scale mortality of piglets (24,693 deaths) across four farms in China (134).
T363 290-497 Sentence denotes The virus isolated from the piglets was almost identical to and had 95% genomic similarity with horseshoe bat (Rhinolophus species) coronavirus HKU2, suggesting a bat origin of the pig virus (106, 134, 135).
T364 498-638 Sentence denotes It is also imperative to note that the SADS-CoV outbreak started in Guangdong province, near the location of the SARS pandemic origin (134).
T365 639-726 Sentence denotes Before this outbreak, pigs were not known to be infected with bat-origin coronaviruses.
T366 727-820 Sentence denotes This indicates that the bat-origin coronavirus jumped to pig by breaking the species barrier.
T367 821-1022 Sentence denotes The next step of this jump might not end well, since pigs are considered the mixing vessel for influenza A viruses due to their ability to be infected by both human and avian influenza A viruses (136).

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T58 12-20 Phenotype denotes diarrhea http://purl.obolibrary.org/obo/HP_0002014

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1651 751-754 Gene denotes bat Gene:570
1652 701-704 Gene denotes bat Gene:570
1653 453-456 Gene denotes bat Gene:570
1654 396-399 Gene denotes bat Gene:570
1655 0-41 Species denotes Swine acute diarrhea syndrome coronavirus Tax:2032731
1656 422-433 Species denotes coronavirus Tax:11118
1657 471-474 Species denotes pig Tax:9823
1658 661-665 Species denotes pigs Tax:9823
1659 712-725 Species denotes coronaviruses Tax:11118
1660 762-773 Species denotes coronavirus Tax:11118
1661 784-787 Species denotes pig Tax:9823
1662 874-878 Species denotes pigs Tax:9823
1663 980-985 Species denotes human Tax:9606
1664 401-412 Species denotes Rhinolophus Tax:693998
1665 916-925 Species denotes influenza Tax:11309
1666 996-1005 Species denotes influenza Tax:11309
1667 277-282 Species denotes China Tax:998089
1668 434-438 Species denotes HKU2 Tax:693998
1669 43-51 Species denotes SADS-CoV Tax:2032731
1670 537-545 Species denotes SADS-CoV Tax:2032731
1671 108-117 Disease denotes enteritis MESH:D004751
1672 219-228 Disease denotes mortality MESH:D003643
1673 248-254 Disease denotes deaths MESH:D003643
1674 687-695 Disease denotes infected MESH:D007239
1675 963-971 Disease denotes infected MESH:D007239