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PMC:7402624 / 23557-23841 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T186 140-143 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T187 246-251 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
835 148-152 Gene denotes CD38 Gene:952
836 154-157 Gene denotes PD1 Gene:6622
837 168-172 Gene denotes CD95 Gene:355
838 211-215 Gene denotes Tbet Gene:30009
839 216-222 Gene denotes CX3CR1 Gene:1524
840 240-243 Gene denotes CD4 Gene:920
843 71-79 Species denotes patients Tax:9606
845 185-192 Species denotes Cluster Tax:100569
851 62-70 Disease denotes COVID-19 MESH:C000657245
852 92-94 Disease denotes HD MESH:D006816

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T170 62-70 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T171 92-94 Disease denotes HD http://purl.obolibrary.org/obo/MONDO_0007739
T172 99-101 Disease denotes RD http://purl.obolibrary.org/obo/MONDO_0009973

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T428 99-101 http://purl.obolibrary.org/obo/CLO_0008770 denotes RD
T429 148-152 http://purl.obolibrary.org/obo/PR_000001408 denotes CD38
T430 240-243 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T431 244-251 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T129 92-94 Chemical denotes HD http://purl.obolibrary.org/obo/CHEBI_73925
T130 99-101 Chemical denotes RD http://purl.obolibrary.org/obo/CHEBI_73812
T131 144-146 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T132 154-157 Chemical denotes PD1 http://purl.obolibrary.org/obo/CHEBI_138655
T133 225-233 Chemical denotes effector http://purl.obolibrary.org/obo/CHEBI_35224

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T143 0-284 Sentence denotes This analysis identified an increase in Clusters 13 and 14 in COVID-19 patients compared to HD and RD that represent populations expressing HLA-DR, CD38, PD1, KI67 and CD95, as well as Cluster 15 that contained Tbet+CX3CR1+ “effector-like” CD4 T cells (Fig. 3, I and J, and fig. S3G).