PMC:7402624 / 216-709
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T1 | 204-208 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T2 | 215-219 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T3 | 286-290 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T4 | 346-357 | Body_part | denotes | plasmablast | http://purl.org/sig/ont/fma/fma84371 |
| T5 | 399-404 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T6 | 436-446 | Body_part | denotes | lymphocyte | http://purl.org/sig/ont/fma/fma62863 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 13 | 28-36 | Species | denotes | patients | Tax:9606 |
| 14 | 247-255 | Species | denotes | patients | Tax:9606 |
| 15 | 271-279 | Species | denotes | patients | Tax:9606 |
| 17 | 19-27 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 18 | 326-341 | Disease | denotes | viral infection | MESH:D001102 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T3 | 19-27 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T4 | 326-341 | Disease | denotes | viral infection | http://purl.obolibrary.org/obo/MONDO_0005108 |
| T5 | 332-341 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 188-198 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activation |
| T5 | 202-208 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cell |
| T6 | 213-219 | http://purl.obolibrary.org/obo/CL_0000236 | denotes | B cell |
| T7 | 231-232 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T8 | 257-258 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T9 | 284-290 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cell |
| T10 | 291-301 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activation |
| T11 | 397-404 | http://purl.obolibrary.org/obo/CL_0000236 | denotes | B cells |
| T12 | 447-457 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activation |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 284-301 | http://purl.obolibrary.org/obo/GO_0042110 | denotes | T cell activation |
| T3 | 286-301 | http://purl.obolibrary.org/obo/GO_0001775 | denotes | cell activation |
| T4 | 326-341 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | viral infection |
| T5 | 436-457 | http://purl.obolibrary.org/obo/GO_0046649 | denotes | lymphocyte activation |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 3-117 | Sentence | denotes | We analyzed 125 COVID-19 patients, and compared recovered to healthy individuals using high dimensional cytometry. |
| T5 | 118-256 | Sentence | denotes | Integrated analysis of ~200 immune and ~50 clinical features revealed activation of T cell and B cell subsets in a proportion of patients. |
| T6 | 257-405 | Sentence | denotes | A subgroup of patients had T cell activation characteristic of acute viral infection and plasmablast responses reaching >30% of circulating B cells. |
| T7 | 406-492 | Sentence | denotes | However, another subgroup had lymphocyte activation comparable to uninfected subjects. |